Clone BO16481 Report

Search the DGRC for BO16481

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:164
Well:81
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO16481.pep: Imported from assembly
Sequenced Size:1738

Clone Sequence Records

BO16481.3prime Sequence

749 bp (682 high quality bases) assembled on 2006-10-13

> BO16481.3prime
ATGGTCTAGAAAGCTTGCCTTGCTCTGCTCGAATCGCTGTGTCAGCGATG
CAATGTTGGACTTTGGCGCCGCCGCCAATGTTGCCGCCTTTACAGTGGGT
GGCGTGGGCGCTGCTCCGCCATTCGCCCGCTTTCCCAGTACTCCTCCCGC
TCCACCGCCGCTGAAGGATGGCTTTGCTGACAGTGGTTTGGGCTTTTGAA
TGGTGGCCGATGGCGCTGTGGTGGACGCTCCAGCCGTTCCATTGGGCAGT
GTTTTCGTTGTGCTCTTCATAAAGGATTTGGGACGGGCGTAATTGGTTAC
GCCGCTCATGCTGCCGCTGCTGCTCCGTTTGGCCAGCTGGACTACTGGCG
CTGGCTGCGACTGACCGACGTTTCCCCCCGCCGCCGGCTTGAAGCTGGAC
ATGCTGGGCTGCGCCTGCGCCTGCGCCTGTGATTTGTCCGCCACAGTGGG
CTTAACCCGAGCCACGGGAGCATTGGCTGGCGGCGGGCGGTGATATGTGC
TTGCAGATGCATTAGCTGCCTTTTCCTCCAGCACACTGCTCGCTGGCTTG
GGTGGAGCAGGTCGCTGGGGACTTTTTGGGGGATCTGCGGGTGTTGGTTG
AGCTGCTGATGCTGCTGCAGCAACGGGCTTTCCTGAGTATATGGAATCCC
CGTTGATCTTTTCTAGTTCATTCACTATTTCATTTAGCAAACCCATATCG
CTGCCATTACTCGCCCTGTTGGCCACCAAATCGCTCCGCTTGAGGGTCT

BO16481.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 16:07:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG7649-PB 4224 Neu3-RB 3491..4221 749..19 3655 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:49:27
Subject Length Description Subject Range Query Range Score Percent Strand
Meltrin-RC 5841 CG7649-RC 4178..4908 749..19 3655 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:49:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14665840..14666570 19..749 3655 100 Plus
Blast to na_te.dros performed 2015-01-30 18:49:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6854..6909 635..577 108 67.8 Minus

BO16481.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:52:10 Download gff for BO16481.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7649-PB 3491..4224 18..749 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 19:27:03 Download gff for BO16481.3prime
Subject Subject Range Query Range Percent Splice Strand
Meltrin-RC 4221..4954 18..749 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:44:41 Download gff for BO16481.3prime
Subject Subject Range Query Range Percent Splice Strand
Meltrin-RC 4178..4908 19..749 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 19:44:41 Download gff for BO16481.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 14665840..14666570 19..749 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 19:27:03 Download gff for BO16481.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10491562..10492292 19..749 100   Plus

BO16481.5prime Sequence

642 bp (641 high quality bases) assembled on 2006-10-13

> BO16481.5prime
GAAGTTATCAGTCGACATGGATTCGGCACTATTAAAATCACCAAGCGACT
CCACACCGTCAGCTGGACTTTTTGGAAAATTCGATGGCTTCACTCTGCGA
CCGCTGAACGATGCATCTTCACCAGCGAGCAACTACAACGGACCAAATGT
GGCCTTTGTGCAACCCACTGTGCAGCAGGATGGACCGCAGCGAATGGCCC
CACCACCCCCAGTAGTAAAACCAGGAACGGCTCCCATTCATCCCCCATCC
CCGAAACCAGAAGCTACTTGGGTGAGGCCAGCGCCCGCTTTGCCACCACC
CAATCCTGGCTCAACGGCACGTCCCATTATCTCACCACCCAAACTGGATT
CTAGTACATTAACTATGGTACCACTCAAGGACAGCACAGAGGATCTCTCG
CCCAGTCGATCTGCTCCTCCAGTTCCTCTACACGCTGATCCCAAGCTAAA
TGTTAAACGAGATGGTACCATTCGTCGATTTGCTTCGTTTCTGAAAAAGG
AAGAGAAACCGCCACTAAAAGAGAAGACCTACATCGATCGGGAGCGGCTG
CGAACTCTGGAAATTTCTGCCCCTATGCCTGTGCCCGCTGCTCCCCAAGC
TGAATCATCCAATTCCGATTCGGAGACCACTCCACGCGAAGA

BO16481.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 16:07:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG7649-PB 4224 Neu3-RB 2518..3143 17..642 3105 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:51:07
Subject Length Description Subject Range Query Range Score Percent Strand
Meltrin-RC 5841 CG7649-RC 3205..3830 17..642 3115 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:51:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14666918..14667543 642..17 3115 99.8 Minus
Blast to na_te.dros performed on 2015-02-10 15:51:03 has no hits.

BO16481.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:52:10 Download gff for BO16481.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7649-PB 2508..3142 6..641 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 17:17:48 Download gff for BO16481.5prime
Subject Subject Range Query Range Percent Splice Strand
Meltrin-RC 3238..3872 6..641 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:56:54 Download gff for BO16481.5prime
Subject Subject Range Query Range Percent Splice Strand
Meltrin-RC 3195..3829 6..641 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:56:54 Download gff for BO16481.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 14666919..14667553 6..641 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 17:17:48 Download gff for BO16481.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10492641..10493275 6..641 99   Minus

BO16481.complete Sequence

1738 bp assembled on 2009-08-24

> BO16481.complete
GAAGTTATCAGTCGACATGGATTCGGCACTATTAAAATCACCAAGCGACT
CCACACCGTCAGCTGGACTTTTTGGAAAATTCGATGGCTTCACTCTGCGA
CCGCTGAACGATGCATCTTCACCAGCGAGCAACTACAACGGACCAAATGT
GGCCTTTGTGCAACCCACTGTGCAGCAGGATGGACCGCAGCGAATGGCCC
CACCACCCCCAGTAGTAAAACCAGGAACGGCTCCCATTCATCCCCCATCC
CCGAAACCAGAAGCTACTTGGGTGAGGCCAGCGCCCGCTTTGCCACCACC
CAATCCTGGCTCAACGGCACGTCCCATTATCTCACCACCCAAACTGGATT
CTAGTACATTAACTATGGTACCACTCAAGGACAGCACAGAGGATCTCTCG
CCCAGTCGATCTGCTCCTCCAGTTCCTCTACACGCTGATCCCAAGCTAAA
TGTTAAACGAGATGGTACCATTCGTCGATTTGCTTCGTTTCTGAAAAAGG
AAGAGAAACCGCCACTAAAAGAGAAGACCTACATCGATCGGGAGCGGCTG
CGAACTCTGGAAATTTCTGCCCCTATGCCTGTGCCCGCTGCTCCCCAAGC
TGAATCATCCAATTCCGATTCGGAGACCACTCCACGCGAAGAGGAAACCC
AGAATCTGGTAAAACGCGCACAATCCATGCGTTCGCCCACCAAAAAGGCT
CCACTCCAGAGTTTTGGATCCATGCGTTCTCCACCGGGACTGCCACGGCC
GAAGAGTGGTCAGGTGAATAGCAATGGCGCCTCGAGACCAAAGTCGCCAC
CTCCAAGGCCACCGCCAGTGGTGGTCAAGAAAACAAACTCCATCAGTTCA
TCGGGCTATCAGCGGCCGGTTTCCACTGCCCAGAGATCTGTGGAGAATAC
CTATGACGATTGCGAATTTGTGGAGAATGAAGTGCGAGCCTCGAACGACG
ACATTTACTCCGTAATTGATGAGATTCCGCCAGCGGCACAGACCCTCAAG
CGGAGCGATTTGGTGGCCAACAGGGCGAGTAATGGCAGCGATATGGGTTT
GCTAAATGAAATAGTGAATGAACTAGAAAAGATCAACGGGGATTCCATAT
ACTCAGGAAAGCCCGTTGCTGCAGCAGCATCAGCAGCTCAACCAACACCC
GCAGATCCCCCAAAAAGTCCCCAGCGACCTGCTCCACCCAAGCCAGCGAG
CAGTGTGCTGGAGGAAAAGGCAGCTAATGCATCTGCAAGCACATATCACC
GCCCGCCGCCAGCCAATGCTCCCGTGGCTCGGGTTAAGCCCACTGTGGCG
GACAAATCACAGGCGCAGGCGCAGGCGCAGCCCAGCATGTCCAGCTTCAA
GCCGGCGGCGGGGGGAAACGTCGGTCAGTCGCAGCCAGCGCCAGTAGTCC
AGCTGGCCAAACGGAGCAGCAGCGGCAGCATGAGCGGCGTAACCAATTAC
GCCCGTCCCAAATCCTTTATGAAGAGCACAACGAAAACACTGCCCAATGG
AACGGCTGGAGCGTCCACCACAGCGCCATCGGCCACCATTCAAAAGCCCA
AACCACTGTCAGCAAAGCCATCCTTCAGCGGCGGTGGAGCGGGAGGAGTA
CTGGGAAAGCGGGCGAATGGCGGAGCAGCGCCCACGCCACCCACTGTAAA
GGCGGCAACATTGGCGGCGGCGCCAAAGTCCAACATTGCATCGCTGACAC
AGCGATTCGAGCAGAGCAAGGCAAGCTTTCTAGACCAT

BO16481.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:31:30
Subject Length Description Subject Range Query Range Score Percent Strand
Meltrin-RC 4224 CG7649-PC 2518..4221 17..1720 8505 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:31:30
Subject Length Description Subject Range Query Range Score Percent Strand
Meltrin-RC 5841 CG7649-RC 3205..4908 17..1720 8505 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:31:28
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14665840..14667543 1720..17 8505 99.9 Minus
Blast to na_te.dros performed 2014-11-28 01:31:29
Subject Length Description Subject Range Query Range Score Percent Strand
BS3 1790 BS3 BS3 1790bp 1529..1570 668..710 122 79.1 Plus

BO16481.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:02:33 Download gff for BO16481.complete
Subject Subject Range Query Range Percent Splice Strand
Neu3-RB 3248..4951 17..1722 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:50:08 Download gff for BO16481.complete
Subject Subject Range Query Range Percent Splice Strand
Meltrin-RC 3248..4951 17..1722 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:40 Download gff for BO16481.complete
Subject Subject Range Query Range Percent Splice Strand
Meltrin-RC 3205..4908 17..1722 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:40 Download gff for BO16481.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14665838..14667543 17..1722 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:50:08 Download gff for BO16481.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10491560..10493265 17..1722 99   Minus

BO16481.pep Sequence

Translation from 16 to 1738

> BO16481.pep
MDSALLKSPSDSTPSAGLFGKFDGFTLRPLNDASSPASNYNGPNVAFVQP
TVQQDGPQRMAPPPPVVKPGTAPIHPPSPKPEATWVRPAPALPPPNPGST
ARPIISPPKLDSSTLTMVPLKDSTEDLSPSRSAPPVPLHADPKLNVKRDG
TIRRFASFLKKEEKPPLKEKTYIDRERLRTLEISAPMPVPAAPQAESSNS
DSETTPREEETQNLVKRAQSMRSPTKKAPLQSFGSMRSPPGLPRPKSGQV
NSNGASRPKSPPPRPPPVVVKKTNSISSSGYQRPVSTAQRSVENTYDDCE
FVENEVRASNDDIYSVIDEIPPAAQTLKRSDLVANRASNGSDMGLLNEIV
NELEKINGDSIYSGKPVAAAASAAQPTPADPPKSPQRPAPPKPASSVLEE
KAANASASTYHRPPPANAPVARVKPTVADKSQAQAQAQPSMSSFKPAAGG
NVGQSQPAPVVQLAKRSSSGSMSGVTNYARPKSFMKSTTKTLPNGTAGAS
TTAPSATIQKPKPLSAKPSFSGGGAGGVLGKRANGGAAPTPPTVKAATLA
AAPKSNIASLTQRFEQSKASFLDH

BO16481.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:43:53
Subject Length Description Subject Range Query Range Score Percent Strand
Meltrin-PC 1407 CG7649-PC 840..1407 1..568 2918 100 Plus
CG11835-PD 795 CG11835-PD 258..770 34..555 186 24 Plus
CG11835-PC 795 CG11835-PC 258..770 34..555 186 24 Plus
CG11835-PB 795 CG11835-PB 258..770 34..555 186 24 Plus
CG11835-PA 795 CG11835-PA 258..770 34..555 186 24 Plus