Clone Sequence Records
BO16526.3prime Sequence
620 bp (607 high quality bases) assembled on 2006-10-13
> BO16526.3prime
ATGGTCTAGAAAGCTTGCCAGCTCGTCGTGTTTGGGTCCCGAGAACTCAT
CGTGCGAGATGAAACCGTTCTTATCCTTATCCTCGTGCTGAAAGATCTCC
TCCACCAGCTTGTCGTTCTCAGCCAGCATGTTCTTCAGCTCCTCGGAATC
CTGTCCCTCCACGGCGGTCATCTGCTTCTTTAGATACTCGCTGACCTCTT
CGCGACTCAGCTGCTTGTCGGCATTATCGTCGATCTCCTTGAACACATTG
GTGGTGGGCGGGGCATTGCCGATGTTGATCAGCTCCACATCGAAGAGGAG
GGTGGCCTTGGGCGGTATCACGTTGCCGGCACCCTGGTCACCATAGCCCA
GCTGGGGAGGAATGGTCAGCTTGCGCTTCTCACCCACGCACATGTTGAGC
AGACCCTGATCCCAACCCTTAATCACCTGGCCGGCGCCCAATTGGAATGT
GAAGGGCTGGTCGCGGTCGAAGCTCGAGTCGAATTTCTTGCCATCGGCCT
GCAGAGTTCCAGTGTAGTGCATGGTGAGGGAATCGCCGTTCTTGGACTTT
TGTTCGCACACCTCCGGCGTGCTGATCACCTCCACTTTCAGATCCTGAGC
CCGGACCAGGCTGTTGCTGA
BO16526.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:08:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9847-PB | 696 | Fkbp13-RB | 92..693 | 620..19 | 3010 | 100 | Minus |
| CG9847-PA | 651 | Fkbp13-RA | 47..648 | 620..19 | 3010 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:04:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fkbp14-RF | 1350 | CG9847-RF | 247..848 | 620..19 | 3010 | 100 | Minus |
| Fkbp14-RE | 1294 | CG9847-RE | 191..792 | 620..19 | 3010 | 100 | Minus |
| Fkbp14-RC | 1301 | CG9847-RC | 198..799 | 620..19 | 3010 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:04:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21488017..21488207 | 194..384 | 955 | 100 | Plus |
| 2R | 25286936 | 2R | 21487669..21487847 | 19..197 | 895 | 100 | Plus |
| 2R | 25286936 | 2R | 21495131..21495278 | 473..620 | 740 | 100 | Plus |
| 2R | 25286936 | 2R | 21488271..21488363 | 382..474 | 465 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-31 10:04:48 has no hits.
BO16526.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:52:58 Download gff for
BO16526.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9847-PA | 48..651 | 18..619 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:32:31 Download gff for
BO16526.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fkbp14-RC | 199..799 | 19..619 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:42:13 Download gff for
BO16526.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fkbp14-RC | 199..799 | 19..619 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:42:13 Download gff for
BO16526.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21487669..21487845 | 19..195 | 100 | <- | Plus |
| 2R | 21488019..21488206 | 196..383 | 100 | <- | Plus |
| 2R | 21488273..21488361 | 384..472 | 100 | <- | Plus |
| 2R | 21495131..21495277 | 473..619 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:32:31 Download gff for
BO16526.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17375174..17375350 | 19..195 | 100 | <- | Plus |
| arm_2R | 17375524..17375711 | 196..383 | 100 | <- | Plus |
| arm_2R | 17375778..17375866 | 384..472 | 100 | <- | Plus |
| arm_2R | 17382636..17382782 | 473..619 | 100 | | Plus |
BO16526.5prime Sequence
648 bp (551 high quality bases) assembled on 2006-10-13
> BO16526.5prime
GAAGTTATCAGTCGACATGAATAACTTTTTGGAATACATTTCGGTATTAC
ATTGTTCCTCCATGTCGAAATCCAATCTCGTTATCTCGTGCCTTCTGCTG
GTGGCCATCAGCAACAGCCTGGTCCGGGCTCAGGATCTGAAAGTGGAGGT
GATCAGCACGCCGGAGGTGTGCGAACAAAAGTCCAAGAACGGCGATTCCC
TCACCATGCACTACACTGGAACTCTGCAGGCCGATGGCAAGAAATTCGAC
TCGAGCTTCGACCGCGACCAGCCCTTCACATTCCAATTGGGCGCCGGCCA
GGTGATTAAGGGTTGGGATCAGGGTCTGCTCAACATGTGCGTGGGTGAGA
AGCGCAAGCTGACCATTCCTCCCCAGCTGGGCTATGGTGACCAGGGTGCC
GGCAACGTGATACCGCCCAAGGCCACCCTCCTCTTCGATGTGGAGCTGAT
CAACATCGGCAATGCCCCGCCCACCACCAATGTGTTCAAGGAGATCGACG
ATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTCAGCGAGTATCTAAAG
AAGCAGATGACCGCCGTGGAGGGACAGGATTCCGAGGAGCTGAAGAACAT
GCTGGCTGAGAACGACAAGCTGGTGGAGGAGATCTTTCAGCACGAGGA
BO16526.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:08:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9847-PB | 696 | Fkbp13-RB | 1..632 | 17..648 | 3160 | 100 | Plus |
| CG9847-PA | 651 | Fkbp13-RA | 1..587 | 62..648 | 2935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 11:41:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fkbp14-RC | 1301 | CG9847-RC | 107..738 | 17..648 | 3160 | 100 | Plus |
| Fkbp14-RF | 1350 | CG9847-RF | 199..787 | 60..648 | 2945 | 100 | Plus |
| Fkbp14-RE | 1294 | CG9847-RE | 143..731 | 60..648 | 2945 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 11:41:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21495131..21495326 | 255..60 | 980 | 100 | Minus |
| 2R | 25286936 | 2R | 21488017..21488207 | 534..344 | 955 | 100 | Minus |
| 2R | 25286936 | 2R | 21487730..21487847 | 648..531 | 590 | 100 | Minus |
| 2R | 25286936 | 2R | 21488271..21488363 | 346..254 | 465 | 100 | Minus |
| 2R | 25286936 | 2R | 21497781..21497823 | 59..17 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-08 11:41:40 has no hits.
BO16526.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:52:58 Download gff for
BO16526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9847-PB | 1..631 | 17..647 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:36:11 Download gff for
BO16526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fkbp14-RC | 107..737 | 17..647 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:41:32 Download gff for
BO16526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fkbp14-RC | 107..737 | 17..647 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:41:32 Download gff for
BO16526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21487731..21487845 | 533..647 | 100 | <- | Minus |
| 2R | 21488019..21488206 | 345..532 | 100 | <- | Minus |
| 2R | 21488273..21488361 | 256..344 | 100 | <- | Minus |
| 2R | 21495131..21495326 | 60..255 | 100 | <- | Minus |
| 2R | 21497781..21497823 | 17..59 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:36:11 Download gff for
BO16526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17375236..17375350 | 533..647 | 100 | <- | Minus |
| arm_2R | 17375524..17375711 | 345..532 | 100 | <- | Minus |
| arm_2R | 17375778..17375866 | 256..344 | 100 | <- | Minus |
| arm_2R | 17382636..17382831 | 60..255 | 100 | <- | Minus |
| arm_2R | 17385286..17385328 | 17..59 | 100 | | Minus |
BO16526.complete Sequence
727 bp assembled on 2006-10-11
GenBank Submission: FJ633849
> BO16526.complete
GAAGTTATCAGTCGACATGAATAACTTTTTGGAATACATTTCGGTATTAC
ATTGTTCCTCCATGTCGAAATCCAATCTCGTTATCTCGTGCCTTCTGCTG
GTGGCCATCAGCAACAGCCTGGTCCGGGCTCAGGATCTGAAAGTGGAGGT
GATCAGCACGCCGGAGGTGTGCGAACAAAAGTCCAAGAACGGCGATTCCC
TCACCATGCACTACACTGGAACTCTGCAGGCCGATGGCAAGAAATTCGAC
TCGAGCTTCGACCGCGACCAGCCCTTCACATTCCAATTGGGCGCCGGCCA
GGTGATTAAGGGTTGGGATCAGGGTCTGCTCAACATGTGCGTGGGTGAGA
AGCGCAAGCTGACCATTCCTCCCCAGCTGGGCTATGGTGACCAGGGTGCC
GGCAACGTGATACCGCCCAAGGCCACCCTCCTCTTCGATGTGGAGCTGAT
CAACATCGGCAATGCCCCGCCCACCACCAATGTGTTCAAGGAGATCGACG
ATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTCAGCGAGTATCTAAAG
AAGCAGATGACCGCCGTGGAGGGACAGGATTCCGAGGAGCTGAAGAACAT
GCTGGCTGAGAACGACAAGCTGGTGGAGGAGATCTTTCAGCACGAGGATA
AGGATAAGAACGGTTTCATCTCGCACGATGAGTTCTCGGGACCCAAACAC
GACGAGCTGGCAAGCTTTCTAGACCAT
BO16526.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:24:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fkbp14-RF | 651 | CG9847-PF | 1..648 | 62..709 | 3240 | 100 | Plus |
| Fkbp14-RE | 651 | CG9847-PE | 1..648 | 62..709 | 3240 | 100 | Plus |
| Fkbp14-RC | 651 | CG9847-PC | 1..648 | 62..709 | 3240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:24:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fkbp14-RC | 1301 | CG9847-RC | 107..799 | 17..709 | 3465 | 100 | Plus |
| Fkbp14-RF | 1350 | CG9847-RF | 199..848 | 60..709 | 3250 | 100 | Plus |
| Fkbp14-RE | 1294 | CG9847-RE | 143..792 | 60..709 | 3250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:24:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21495131..21495326 | 255..60 | 980 | 100 | Minus |
| 2R | 25286936 | 2R | 21488017..21488207 | 534..344 | 955 | 100 | Minus |
| 2R | 25286936 | 2R | 21487669..21487847 | 709..531 | 895 | 100 | Minus |
| 2R | 25286936 | 2R | 21488271..21488363 | 346..254 | 465 | 100 | Minus |
| 2R | 25286936 | 2R | 21497781..21497823 | 59..17 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:24:15 has no hits.
BO16526.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:27:19 Download gff for
BO16526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fkbp13-RB | 1..696 | 17..710 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:51:09 Download gff for
BO16526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fkbp13-RC | 104..796 | 17..711 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:22 Download gff for
BO16526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fkbp14-RC | 107..799 | 17..711 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:27:19 Download gff for
BO16526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fkbp13-RB | 104..796 | 17..709 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:17:20 Download gff for
BO16526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fkbp14-RC | 107..799 | 17..711 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:17:20 Download gff for
BO16526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21487667..21487845 | 533..711 | 98 | <- | Minus |
| 2R | 21488019..21488206 | 345..532 | 100 | <- | Minus |
| 2R | 21488273..21488361 | 256..344 | 100 | <- | Minus |
| 2R | 21495131..21495326 | 60..255 | 100 | <- | Minus |
| 2R | 21497781..21497823 | 17..59 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:22 Download gff for
BO16526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17385286..17385328 | 17..59 | 100 | | Minus |
| arm_2R | 17375172..17375350 | 533..711 | 98 | <- | Minus |
| arm_2R | 17375524..17375711 | 345..532 | 100 | <- | Minus |
| arm_2R | 17375778..17375866 | 256..344 | 100 | <- | Minus |
| arm_2R | 17382636..17382831 | 60..255 | 100 | <- | Minus |
BO16526.pep Sequence
Translation from 16 to 727
> BO16526.pep
MNNFLEYISVLHCSSMSKSNLVISCLLLVAISNSLVRAQDLKVEVISTPE
VCEQKSKNGDSLTMHYTGTLQADGKKFDSSFDRDQPFTFQLGAGQVIKGW
DQGLLNMCVGEKRKLTIPPQLGYGDQGAGNVIPPKATLLFDVELINIGNA
PPTTNVFKEIDDNADKQLSREEVSEYLKKQMTAVEGQDSEELKNMLAEND
KLVEEIFQHEDKDKNGFISHDEFSGPKHDELASFLDH
BO16526.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:55:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fkbp14-PF | 216 | CG9847-PF | 1..216 | 16..231 | 1117 | 100 | Plus |
| Fkbp14-PE | 216 | CG9847-PE | 1..216 | 16..231 | 1117 | 100 | Plus |
| Fkbp14-PC | 216 | CG9847-PC | 1..216 | 16..231 | 1117 | 100 | Plus |
| Fkbp14-PA | 216 | CG9847-PA | 1..216 | 16..231 | 1117 | 100 | Plus |
| Fkbp14-PD | 220 | CG9847-PD | 1..220 | 16..231 | 1102 | 98.2 | Plus |
