Clone BO16586 Report

Search the DGRC for BO16586

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:165
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptCG32406-RA
Protein status:BO16586.pep: Imported from assembly
Sequenced Size:1456

Clone Sequence Records

BO16586.complete Sequence

1456 bp assembled on 2010-04-13

GenBank Submission: KX795990

> BO16586.complete
GAAGTTATCAGTCGACATGCCCAAAAGCGAGGCCGCCACAATGATAACCA
ACAATAATTTGGATTATGACCAGGCCAGCGCCAGCAGCACAATAATAGCA
GGAGCTACATCGACGACCGCGGGCACAGCGGCAACATCGGTGGCCATGAG
CAACAGAAATGGCAGCACCAGCAGCAGCAGCAACTCCTCGCCCACGGCGG
ACAATTCCAATTCCAATTCCAACTCGAATTCAAACGCAAATATAAATCGG
AATTTGAATCAGAACCCCAACTCGAACTCCAATACAAACTCCAATTCGTA
TTTCAACCGATTCGACAATCGCATAGCTGCCAACTTGGCTGCCGTTTTAA
CTGGCGCAGGAGCCCGTTTTCGATCCTCCTCCTGCAGCAATCGCCATCCA
GCTGGAGTTGCAAATCCGGCCGTTTTGAGATCACCACTCGCCACAATAAG
CCGCAAGACTAGTCTGGCCACGCCCCCTTCACCAGCGAGTCTAGGACGAC
GCCGCCCACTGCAACTCTTCACGCACGCGAATCTCAATTGCAATGACAAC
GAGAAGGTGGCCCAAACACCAAGCTCCGATGAGGATAATTCGCCCACCGA
ACTAAACAGCTGCAAGCGATTGGCAGACAAACCTCCTCTGGTCAAACGCT
TGACAATGGGCTTGCTGCGCCAAAACGAGGAGTCACGCCCATTGGTGGGC
GACATGACTCCTTTGAGCGCGCCGCTGGACATCCAGCCGGTGTACTCGAA
TGGCTACATCAACGAGGACTCCTACATCGACAGCAAGTTCGGTGACTCGT
GCCGCCAATCCTTGACAGCCATCCCGATGCTGGACAATGTTAACCTGAAC
GACAATAACGAGTTCAACCTGAAGAAGCGCTACTTAAGAGAAACGAGCAG
CGCAAATTCCAGTCCGAAAATCTTTGCCAATCGCCTGCGGATGAACCAGG
GTGCCGTTGGCCAGCGATGCAGCAGTTTGGCCAACGCATTCGGTAATGTG
GGATCCGATGAGGAGGATCTCGAGCTGAAGGATGCCTGCTGGTACCAGGC
GGGCATATCCAGGGACATAGCCGTTGAAGTCCTGCAAAGCAAGAGCCCAG
GTGCGTTTCTCGTGCGGAAGAGCAGCTCCAAACCAGGATGCTATGCACTG
ACACTGCGCGTACCCTCGCCACCTGGGCCGAAAATAGCTAACTACATAAT
CCTACGTTCCCCAAGGGGCTACAAAATCAAGGGTTTCCGCAAGGAGTTCT
CCAGCCTGAAGGCCCTGATCACCCACCATTCGGTGATGCCCGAACTGCTG
CCCGTCCCACTGGCCATGCCACGTCCCACCAACATGTCATCTTCGCGGCG
GAATCTCGACGACTTCGATACCTACGATTCGCTGCAGATGCTGCTGAAGT
ATCTGCGTGCCAAGAACATGGAGACGGAGCAGCAGCAGGCAAGCTTTCTA
GACCAT

BO16586.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:01:13
Subject Length Description Subject Range Query Range Score Percent Strand
PVRAP-RA 1425 CG32406-PA 1..1422 17..1438 7110 100 Plus
CG33993-RB 777 CG33993-PB 349..647 1022..1323 260 73.2 Plus
CG33993-RA 1266 CG33993-PA 838..1136 1022..1323 260 73.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:01:15
Subject Length Description Subject Range Query Range Score Percent Strand
PVRAP-RA 2919 CG32406-RA 805..2226 17..1438 7110 100 Plus
CG33993-RB 1316 CG33993-RB 483..781 1022..1323 260 73.2 Plus
CG33993-RA 2404 CG33993-RA 1242..1540 1022..1323 260 73.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:01:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6019337..6019857 17..537 2605 100 Plus
3L 28110227 3L 6025008..6025338 902..1232 1655 100 Plus
3L 28110227 3L 6024630..6024892 640..902 1315 100 Plus
3L 28110227 3L 6025416..6025624 1230..1438 1045 100 Plus
3L 28110227 3L 6020060..6020164 538..642 525 100 Plus
3L 28110227 3L 5933900..5933967 1323..1256 205 86.8 Minus
Blast to na_te.dros performed 2014-11-27 10:01:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6721..6821 81..184 215 70.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6809..6917 76..184 211 68.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6755..6863 76..187 203 68.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2421 78..184 188 69 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2412..2546 76..216 178 62 Plus
roo 9092 roo DM_ROO 9092bp 1065..1241 97..278 169 57.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2739..2859 70..187 147 60.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2868..3005 76..202 141 61.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2313..2367 126..184 132 74.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2364 121..184 122 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6733..6788 125..184 119 71.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1572 129..184 115 69.6 Plus
Dtei\I-element 5386 Dtei\I-element DTEII 5386bp 570..649 233..309 113 63.7 Plus

BO16586.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:26:21 Download gff for BO16586.complete
Subject Subject Range Query Range Percent Splice Strand
CG32406-RA 799..2220 17..1440 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:03:43 Download gff for BO16586.complete
Subject Subject Range Query Range Percent Splice Strand
CG32406-RA 805..2226 17..1440 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:10:52 Download gff for BO16586.complete
Subject Subject Range Query Range Percent Splice Strand
PVRAP-RA 805..2226 17..1440 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:10:52 Download gff for BO16586.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6024631..6024892 641..902 100 -> Plus
3L 6025009..6025337 903..1231 100 -> Plus
3L 6025418..6025624 1232..1440 99   Plus
3L 6019337..6019857 17..537 100 -> Plus
3L 6020060..6020162 538..640 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:03:43 Download gff for BO16586.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6012437..6012957 17..537 100 -> Plus
arm_3L 6013160..6013262 538..640 100 -> Plus
arm_3L 6017731..6017992 641..902 100 -> Plus
arm_3L 6018109..6018437 903..1231 100 -> Plus
arm_3L 6018518..6018724 1232..1440 99   Plus

BO16586.3prime Sequence

592 bp (493 high quality bases) assembled on 2006-10-13

> BO16586.3prime
ATGGTCTAGAAAGCTTGCCTGCTGCTGCTCCGTCTCCATGTTCTTGGCAC
GCAGATACTTCAGCAGCATCTGCAGCGAATCGTAGGTATCGAAGTCGTCG
AGATTCCGCCGCGAAGATGACATGTTGGTGGGACGTGGCATGGCCAGTGG
GACGGGCAGCAGTTCGGGCATCACCGAATGGTGGGTGATCAGGGCCTTCA
GGCTGGAGAACTCCTTGCGGAAACCCTTGATTTTGTAGCCCCTTGGGGAA
CGTAGGATTATGTAGTTAGCTATTTTCGGCCCAGGTGGCGAGGGTACGCG
CAGTGTCAGTGCATAGCATCCTGGTTTGGAGCTGCTCTTCCGCACGAGAA
ACGCACCTGGGCTCTTGCTTTGCAGGACTTCAACGGCTATGTCCCTGGAT
ATGCCCGCCTGGTACCAGCAGGCATCCTTCAGCTCGAGATCCTCCTCATC
GGATCCCACATTACCGAATGCGTTGGCCAAACTGCTGCATCGCTGGCCCA
CGGCACCCTGGTTCATCCGCAGGCGATTGGCAAAGATTTTCGGACTGGAA
TTTGCGCTGCTCGTTTCTCTTAAGTAGCGCTTCTTCAAGTTG

BO16586.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 16:21:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG32406-PA 1425 CG32406-RA 854..1422 587..19 2820 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:02:27
Subject Length Description Subject Range Query Range Score Percent Strand
PVRAP-RA 2919 CG32406-RA 1653..2226 592..19 2840 99.7 Minus
CG33993-RB 1316 CG33993-RB 483..787 435..127 295 73.5 Minus
CG33993-RA 2404 CG33993-RA 1242..1546 435..127 295 73.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:02:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6025008..6025338 555..225 1640 99.7 Minus
3L 28110227 3L 6025416..6025624 227..19 1045 100 Minus
3L 28110227 3L 5933900..5933967 134..201 205 86.8 Plus
Blast to na_te.dros performed on 2015-02-10 23:02:25 has no hits.

BO16586.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:54:12 Download gff for BO16586.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32406-PA 849..1425 18..592 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:00:02 Download gff for BO16586.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32406-RA 1653..2231 12..592 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:17:45 Download gff for BO16586.3prime
Subject Subject Range Query Range Percent Splice Strand
PVRAP-RA 1653..2231 12..592 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:17:45 Download gff for BO16586.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 6025009..6025337 226..554 99 -> Minus
3L 6025418..6025629 12..225 98   Minus
3L 6024855..6024892 555..592 97 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:00:02 Download gff for BO16586.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6017955..6017992 555..592 97 -> Minus
arm_3L 6018518..6018729 12..225 98   Minus
arm_3L 6018109..6018437 226..554 99 -> Minus

BO16586.5prime Sequence

594 bp (541 high quality bases) assembled on 2006-10-13

> BO16586.5prime
GAAGTTATCAGTCGACATGCCCAAAAGCGAGGCCGCCACAATGATAACCA
ACAATAATTTGGATTATGACCAGGCCAGCGCCAGCAGCACAATAATAGCA
GGAGCTACATCGACGACCGCGGGCACAGCGGCAACATCGGTGGCCATGAG
CAACAGAAATGGCAGCACCAGCAGCAGCAGCAACTCCTCGCCCACGGCGG
ACAATTCCAATTCCAATTCCAACTCGAATTCAAACGCAAATATAAATCGG
AATTTGAATCAGAACCCCAACTCGAACTCCAATACAAACTCCAATTCGTA
TTTCAACCGATTCGACAATCGCATAGCTGCCAACTTGGCTGCCGTTTTAA
CTGGCGCAGGAGCCCGTTTTCGATCCTCCTCCTGCAGCAATCGCCATCCA
GCTGGAGTTGCAAATCCGGCCGTTTTGAGATCACCACTCGCCACAATAAG
CCGCAAGACTAGTCTGGCCACGCCCCCTTCACCAGCGAGTCTAGGACGAC
GCCGCCCACTGCAACTCTTCACGCACGCGAATCTCAATTGCAATGGACAC
GAGAAGGTGGCCCAAACACCAAGCTCCGATGAGGATAATTCGCC

BO16586.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 16:21:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG32406-PA 1425 CG32406-RA 1..578 17..594 2815 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:44:06
Subject Length Description Subject Range Query Range Score Percent Strand
PVRAP-RA 2919 CG32406-RA 805..1382 17..594 2845 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:44:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6019337..6019857 17..537 2605 100 Plus
3L 28110227 3L 6020060..6020116 538..594 240 94.7 Plus
Blast to na_te.dros performed 2015-02-12 10:44:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6721..6821 81..184 215 70.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6809..6917 76..184 211 68.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6755..6863 76..187 203 68.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2421 78..184 188 69 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2412..2546 76..216 178 62 Plus
roo 9092 roo DM_ROO 9092bp 1065..1241 97..278 169 57.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2739..2859 70..187 147 60.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2868..3005 76..202 141 61.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2313..2367 126..184 132 74.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2364 121..184 122 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6733..6788 125..184 119 71.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1572 129..184 115 69.6 Plus
Dtei\I-element 5386 Dtei\I-element DTEII 5386bp 570..649 233..309 113 63.7 Plus
roo 9092 roo DM_ROO 9092bp 1062..1097 149..184 108 77.8 Plus
I-element 5371 I-element DMIFACA 5371bp Derived from M14954 (g157749) (Rel. 44, Last updated, Version 2). 595..628 260..293 107 79.4 Plus

BO16586.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:54:13 Download gff for BO16586.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32406-PA 1..578 17..594 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:38:48 Download gff for BO16586.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32406-RA 800..1382 10..594 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:12:36 Download gff for BO16586.5prime
Subject Subject Range Query Range Percent Splice Strand
PVRAP-RA 800..1382 10..594 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:12:36 Download gff for BO16586.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 6019332..6019857 10..537 99 -> Plus
3L 6020060..6020116 538..594 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:38:48 Download gff for BO16586.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6012432..6012957 10..537 99 -> Plus
arm_3L 6013160..6013216 538..594 96   Plus

BO16586.pep Sequence

Translation from 16 to 1456

> BO16586.pep
MPKSEAATMITNNNLDYDQASASSTIIAGATSTTAGTAATSVAMSNRNGS
TSSSSNSSPTADNSNSNSNSNSNANINRNLNQNPNSNSNTNSNSYFNRFD
NRIAANLAAVLTGAGARFRSSSCSNRHPAGVANPAVLRSPLATISRKTSL
ATPPSPASLGRRRPLQLFTHANLNCNDNEKVAQTPSSDEDNSPTELNSCK
RLADKPPLVKRLTMGLLRQNEESRPLVGDMTPLSAPLDIQPVYSNGYINE
DSYIDSKFGDSCRQSLTAIPMLDNVNLNDNNEFNLKKRYLRETSSANSSP
KIFANRLRMNQGAVGQRCSSLANAFGNVGSDEEDLELKDACWYQAGISRD
IAVEVLQSKSPGAFLVRKSSSKPGCYALTLRVPSPPGPKIANYIILRSPR
GYKIKGFRKEFSSLKALITHHSVMPELLPVPLAMPRPTNMSSSRRNLDDF
DTYDSLQMLLKYLRAKNMETEQQQASFLDH

BO16586.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:15:15
Subject Length Description Subject Range Query Range Score Percent Strand
PVRAP-PA 474 CG32406-PA 1..474 1..474 2424 100 Plus
CG33993-PA 421 CG33993-PA 133..421 183..468 686 51.9 Plus
CG33993-PB 258 CG33993-PB 3..258 214..468 557 49.1 Plus
CG10479-PA 378 CG10479-PA 238..377 331..469 241 44.1 Plus
CG10479-PB 379 CG10479-PB 239..378 331..469 241 44.1 Plus