Clone Sequence Records
BO16650.5prime Sequence
508 bp (506 high quality bases) assembled on 2006-10-13
> BO16650.5prime
GAAGTTATCAGTCGACATGTTCAACACTAGACTTGCCATTTTTTTGCTTC
TTATCGTTGTTTCGCTTAGCCAAGCTAAGGAAAGCCAACCCTTTGACTTT
TTCGAAGGAACCTATGACGATTTTATTGATTGTCTGAGAATCAATAATAT
TACCATTGAAGAGTATGAGAAGTTTGACGATACCGACAATTTGGATAATG
TCCTCAAGGAAAATGTCGAACTGAAGCACAAGTGCAACATTAAGTGTCAA
CTGGAAAGAGAGCCAACCAAATGGCTAAATGCTCGGGGTGAAGTCGATCT
GAAATCAATGAAAGCAACCAGTGAGACAGCGGTATCCATATCAAAGTGCA
TGGAGAAGGCTCCCCAAGAAACCTGTGCCTACGTCTATAAATTGGTAATA
TGTGCATTCAAATCCGGACATTCAGTCATCAAGTTCGATTCATATGAACA
AATACAAGAGGAAACCGCTGGACTAATAGCTGAACAGCAGGCGGATCTGT
TTGATTAC
BO16650.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 16:24:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30141-PA | 510 | Obp57a-RA | 1..492 | 17..508 | 2460 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:40:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57a-RA | 558 | CG30141-RA | 20..511 | 17..508 | 2460 | 100 | Plus |
Obp57b-RB | 823 | CG30142-RB | 142..407 | 143..408 | 250 | 74.3 | Plus |
Obp57b-RA | 477 | CG30142-RA | 142..407 | 143..408 | 250 | 74.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:40:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20505281..20505711 | 78..508 | 2155 | 100 | Plus |
2R | 25286936 | 2R | 20505169..20505232 | 17..80 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:40:39 has no hits.
BO16650.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:54:31 Download gff for
BO16650.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30141-PA | 1..492 | 17..508 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:36:16 Download gff for
BO16650.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57a-RA | 12..511 | 10..508 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:59:28 Download gff for
BO16650.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57a-RA | 12..511 | 10..508 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:59:28 Download gff for
BO16650.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20505161..20505231 | 10..79 | 95 | -> | Plus |
2R | 20505283..20505711 | 80..508 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:36:16 Download gff for
BO16650.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16392666..16392736 | 10..79 | 95 | -> | Plus |
arm_2R | 16392788..16393216 | 80..508 | 100 | | Plus |
BO16650.complete Sequence
541 bp assembled on 2007-03-23
GenBank Submission: FJ633875
> BO16650.complete
GAAGTTATCAGTCGACATGTTCAACACTAGACTTGCCATTTTTTTGCTTC
TTATCGTTGTTTCGCTTAGCCAAGCTAAGGAAAGCCAACCCTTTGACTTT
TTCGAAGGAACCTATGACGATTTTATTGATTGTCTGAGAATCAATAATAT
TACCATTGAAGAGTATGAGAAGTTTGACGATACCGACAATTTGGATAATG
TCCTCAAGGAAAATGTCGAACTGAAGCACAAGTGCAACATTAAGTGTCAA
CTGGAAAGAGAGCCAACCAAATGGCTAAATGCTCGGGGTGAAGTCGATCT
GAAATCAATGAAAGCAACCAGTGAGACAGCGGTATCCATATCAAAGTGCA
TGGAGAAGGCTCCCCAAGAAACCTGTGCCTACGTCTATAAATTGGTAATA
TGTGCATTCAAATCCGGACATTCAGTCATCAAGTTCGATTCATATGAACA
AATACAAGAGGAAACCGCTGGACTAATAGCTGAACAGCAGGCGGATCTGT
TTGATTACGATACCATCGATTTAGCAAGCTTTCTAGACCAT
BO16650.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:41:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57a-RA | 510 | CG30141-PA | 1..507 | 17..523 | 2535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57a-RA | 558 | CG30141-RA | 20..526 | 17..523 | 2535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20505281..20505726 | 78..523 | 2230 | 100 | Plus |
2R | 25286936 | 2R | 20505169..20505232 | 17..80 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:41:58 has no hits.
BO16650.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:35:48 Download gff for
BO16650.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57a-RA | 1..510 | 17..527 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:56:54 Download gff for
BO16650.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57a-RA | 1..512 | 16..527 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:03:44 Download gff for
BO16650.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57a-RA | 25..526 | 22..525 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:35:48 Download gff for
BO16650.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57a-RA | 1..512 | 16..527 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:47:16 Download gff for
BO16650.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57a-RA | 25..526 | 22..525 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:47:16 Download gff for
BO16650.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20505174..20505231 | 22..79 | 100 | -> | Plus |
2R | 20505283..20505726 | 80..525 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:03:44 Download gff for
BO16650.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16392679..16392736 | 22..79 | 100 | -> | Plus |
arm_2R | 16392788..16393231 | 80..525 | 99 | | Plus |
BO16650.pep Sequence
Translation from 16 to 541
> BO16650.pep
MFNTRLAIFLLLIVVSLSQAKESQPFDFFEGTYDDFIDCLRINNITIEEY
EKFDDTDNLDNVLKENVELKHKCNIKCQLEREPTKWLNARGEVDLKSMKA
TSETAVSISKCMEKAPQETCAYVYKLVICAFKSGHSVIKFDSYEQIQEET
AGLIAEQQADLFDYDTIDLASFLDH
BO16650.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:34:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57a-PA | 169 | CG30141-PA | 1..169 | 1..169 | 876 | 100 | Plus |
Obp57b-PB | 141 | CG30142-PB | 1..138 | 1..138 | 408 | 55.1 | Plus |
Obp57b-PA | 141 | CG30142-PA | 1..138 | 1..138 | 408 | 55.1 | Plus |