Clone Sequence Records
BO16685.3prime Sequence
320 bp (320 high quality bases) assembled on 2006-10-13
> BO16685.3prime
ATGGTCTAGAAAGCTTGCAGGATGCATGGCATTTAGGGCGAGTGGAATGG
ACATGGCGGGCTGGACCATTCGCTCACTCTCCATTTCCAATTTACGTTCC
AAGATGTCCTCTCGCCCAATGTCGATGTCTATCGGCTGCCAGTGATGGTA
GCTTTCGATCCTCGAGGACAATGGAAAAGTGCTGCACACGGTCGTCAAAC
TGGAGTTTTTGGTCAGGTCATGGTTGTACTGCTCCTCGCTGCTCGTGGTT
ACCTCGTCGAGATCCTTATCCACATCCTGCGCCTGCAACTGTTGCTTGAC
ATCCATGTCGACTGATAACT
BO16685.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 16:27:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11666-PA | 291 | CG11666-RA | 1..288 | 306..19 | 1440 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:08:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11666-RA | 561 | CG11666-RA | 36..323 | 306..19 | 1440 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 19:07:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20984721..20985008 | 306..19 | 1440 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-30 19:08:00 has no hits.
BO16685.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:55:10 Download gff for
BO16685.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11666-PA | 1..291 | 15..306 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 19:31:25 Download gff for
BO16685.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11666-RA | 32..326 | 15..314 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:48:11 Download gff for
BO16685.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11666-RA | 32..326 | 15..314 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 19:48:11 Download gff for
BO16685.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20984717..20985011 | 15..314 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 19:31:25 Download gff for
BO16685.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20855744..20856038 | 15..314 | 98 | | Minus |
BO16685.complete Sequence
322 bp assembled on 2011-06-28
GenBank Submission: KX794785
> BO16685.complete
GAAGTTATCAGTCGACATGGATGTCAAGCAACAGTTGCAGGCGCAGGATG
TGGATAAGGATCTCGACGAGGTAACCACGAGCAGCGAGGAGCAGTACAAC
CATGACCTGACCAAAAACTCCAGTTTGACGACCGTGTGCAGCACTTTTCC
ATTGTCCTCGAGGATCGAAAGCTACCATCACTGGCAGCCGATAGACATCG
ACATTGGGCGAGAGGACATCTTGGAACGTAAATTGGAAATGGAGAGTGAG
CGAATGGTCCAGCCCGCCATGTCCATTCCACTCGCCCTAAATGCCATGCA
TCCTGCAAGCTTTCTAGACCAT
BO16685.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:19:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11666-RA | 291 | CG11666-PA | 1..288 | 17..304 | 1440 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11666-RA | 561 | CG11666-RA | 36..323 | 17..304 | 1440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20984721..20985008 | 17..304 | 1440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:19:25 has no hits.
BO16685.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 12:16:33 Download gff for
BO16685.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11666-RA | 36..323 | 17..306 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:57:56 Download gff for
BO16685.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11666-RA | 36..323 | 17..306 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:16:23 Download gff for
BO16685.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11666-RA | 36..323 | 17..306 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:16:23 Download gff for
BO16685.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20984721..20985008 | 17..306 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:57:56 Download gff for
BO16685.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20855748..20856035 | 17..306 | 99 | | Plus |
BO16685.pep Sequence
Translation from 16 to 322
> BO16685.pep
MDVKQQLQAQDVDKDLDEVTTSSEEQYNHDLTKNSSLTTVCSTFPLSSRI
ESYHHWQPIDIDIGREDILERKLEMESERMVQPAMSIPLALNAMHPASFL
DH
BO16685.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:51:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11666-PA | 96 | CG11666-PA | 1..96 | 1..96 | 496 | 100 | Plus |
