Clone Sequence Records
BO16696.5prime Sequence
242 bp (242 high quality bases) assembled on 2006-10-13
> BO16696.5prime
GAAGTTATCAGTCGACATGCAGAAGAAGCCGATTAACACCAACACGCTGC
TGGACAAGCTGCACCGCGGCGCGGTGTATGCCTGCATTGGAGTCACCCTG
TACGGCACCTACATCCTGGGAATGCGCTACTACCACTACTGCACGGTCAT
CCGACCGGAGAAGCAGCAGGCGGAGCTGAAGCTCCTGGACGAGGGAGCCC
ACGACAAGGCCAAGGAACTGAAGTACGCAAGCTTTCTAGACC
BO16696.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 16:28:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17776-PA | 213 | CG17776-RA | 1..210 | 17..226 | 1050 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:26:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17776-RB | 534 | CG17776-RB | 240..450 | 16..226 | 1055 | 100 | Plus |
| CG17776-RA | 372 | CG17776-RA | 78..288 | 16..226 | 1055 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:26:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2184964..2185174 | 16..226 | 1055 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 16:26:11 has no hits.
BO16696.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:55:23 Download gff for
BO16696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17776-PA | 1..213 | 17..227 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 23:09:29 Download gff for
BO16696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17776-RA | 69..293 | 7..232 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:48:25 Download gff for
BO16696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17776-RA | 69..293 | 7..232 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:48:25 Download gff for
BO16696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2184955..2185179 | 7..232 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 23:09:29 Download gff for
BO16696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2078988..2079212 | 7..232 | 96 | | Plus |
BO16696.complete Sequence
244 bp assembled on 2007-10-29
GenBank Submission: FJ633892
> BO16696.complete
GAAGTTATCAGTCGACATGCAGAAGAAGCCGATTAACACCAACACGCTGC
TGGACAAGCTGCACCGCGGCGCGGTGTATGCCTGCATTGGAGTCACCCTG
TACGGCACCTACATCCTGGGAATGCGCTACTACCACTACTGCACGGTCAT
CCGACCGGAGAAGCAGCAGGCGGAGCTGAAGCTCCTGGACGAGGGAGCCC
ACGACAAGGCCAAGGAACTGAAGTACGCAAGCTTTCTAGACCAT
BO16696.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:16:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17776-RB | 213 | CG17776-PB | 1..210 | 17..226 | 1050 | 100 | Plus |
| CG17776-RA | 213 | CG17776-PA | 1..210 | 17..226 | 1050 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:16:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17776-RB | 534 | CG17776-RB | 240..450 | 16..226 | 1055 | 100 | Plus |
| CG17776-RA | 372 | CG17776-RA | 78..288 | 16..226 | 1055 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:16:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2184964..2185174 | 16..226 | 1055 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:16:02 has no hits.
BO16696.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:03:13 Download gff for
BO16696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17776-RA | 1..213 | 17..227 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:11:35 Download gff for
BO16696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17776-RA | 16..240 | 7..232 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:05:47 Download gff for
BO16696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17776-RA | 79..288 | 17..228 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:36:19 Download gff for
BO16696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17776-RA | 26..235 | 17..228 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:21 Download gff for
BO16696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17776-RA | 79..288 | 17..228 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:21 Download gff for
BO16696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2184965..2185174 | 17..228 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:05:47 Download gff for
BO16696.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2078998..2079207 | 17..228 | 99 | | Plus |
BO16696.pep Sequence
Translation from 16 to 244
> BO16696.pep
MQKKPINTNTLLDKLHRGAVYACIGVTLYGTYILGMRYYHYCTVIRPEKQ
QAELKLLDEGAHDKAKELKYASFLDH
BO16696.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:28:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17776-PB | 70 | CG17776-PB | 1..70 | 1..70 | 374 | 100 | Plus |
| CG17776-PA | 70 | CG17776-PA | 1..70 | 1..70 | 374 | 100 | Plus |
