Clone BO16745 Report

Search the DGRC for BO16745

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:167
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptDip1-RA
Protein status:BO16745.pep: validated full length
Sequenced Size:559

Clone Sequence Records

BO16745.3prime Sequence

557 bp (557 high quality bases) assembled on 2006-10-13

> BO16745.3prime
ATGGTCTAGAAAGCTTGCAAGATCCTTGTGCGAGAACTTTAAGTGAAATT
TGCAGGCCTTCTCCGTGTAAAAACATTCGCCGCAGAAGCCGCACTTGAAG
GCCGGTCCGGAGTCGCTGCTGAACTCGTTGGTGGGAGTAGCAGCTCTTTT
GGTCGACACTGCTTCCGCCAGCACCGTGGGCAGTTGCTCATTCTTCGGTT
CCACCGGATGAGTTTGGGTTTGCGTGTGCGACTGGGATTTGCTGGCCTGG
CTGCGCCTTCGGCGCTGCTCGAACTTTAGGGCCACGTTGAACTCGCCGTG
GGCGCCCAGCCACTGGTGGCTGAACTCGTAGGCCATCGACAGCTTCTTCA
CGCAGATGCGGCAGATCTGTTTGGGATAGTCGTCCTCTGGGTCCAGTGGC
GGCAAGGAGGCGGGCAGGCAGGACGCTAGCATATCCGCAATGGGCACCAT
CTGGTCAAGCACTTGGGCACACTCATTGTAAATGGACAGCGATTCCAGGC
ATTCGTTTCCGCACGTGCGACAGAAGCTCTCGAATATGTCCATGTCGACT
GATAACT

BO16745.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 16:28:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG15367-PA 528 Dip1-RA 1..525 543..19 2625 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:46:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dip1-RA 691 CG15367-RA 56..580 543..19 2625 100 Minus
Dip1-RB 694 CG15367-RB 56..583 543..19 2585 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:46:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9158677..9159076 543..144 2000 100 Minus
X 23542271 X 9159138..9159264 145..19 635 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:46:47 has no hits.

BO16745.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:55:33 Download gff for BO16745.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15367-PA 1..528 18..543 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 08:01:29 Download gff for BO16745.3prime
Subject Subject Range Query Range Percent Splice Strand
Dip1-RA 52..580 19..551 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:11:40 Download gff for BO16745.3prime
Subject Subject Range Query Range Percent Splice Strand
Dip1-RA 52..580 19..551 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:11:40 Download gff for BO16745.3prime
Subject Subject Range Query Range Percent Splice Strand
X 9158673..9159076 144..551 99 -> Minus
X 9159140..9159264 19..143 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 08:01:29 Download gff for BO16745.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9052706..9053109 144..551 99 -> Minus
arm_X 9053173..9053297 19..143 100   Minus

BO16745.5prime Sequence

557 bp (557 high quality bases) assembled on 2006-10-13

> BO16745.5prime
GAAGTTATCACTCGACATGGACATATTCGAGAGCTTCTGTCGCACGTGCG
GAAACGAATGCCTGGAATCGCTGTCCATTTACAATGAGTGTGCCCAAGTG
CTTGACCAGATGGTGCCCATTGCGGATATGCTAGCGTCCTGCCTGCCCGC
CTCCTTGCCGCCACTGGACCCAGAGGACGACTATCCCAAACAGATCTGCC
GCATCTGCGTGAAGAAGCTGTCGATGGCCTACGAGTTCAGCCACCAGTGG
CTGGGCGCCCACGGCGAGTTCAACGTGGCCCTAAAGTTCGAGCAGCGCCG
AAGGCGCAGCCAGGCCAGCAAATCCCAGTCGCACACGCAAACCCAAACTC
ATCCGGTGGAACCGAAGAATGAGCAACTGCCCACGGTGCTGGCGGAAGCA
GTGTCGACCAAAAGAGCTGCTACTCCCACCAACGAGTTCAGCAGCGACTC
CGGACCGGCCTTCAAGTGCGGCTTCTGCGGCGAATGTTTTTACACGGAGA
AGGCCTGCAAATTTCACTTAAAGTTCTCGCACAAGGATCTTGCAAGCTTT
CTAGACC

BO16745.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 16:28:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG15367-PA 528 Dip1-RA 1..525 17..541 2625 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:16:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dip1-RA 691 CG15367-RA 56..580 17..541 2625 100 Plus
Dip1-RB 694 CG15367-RB 56..583 17..541 2585 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:16:23
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9158677..9159076 17..416 2000 100 Plus
X 23542271 X 9159138..9159264 415..541 635 100 Plus
Blast to na_te.dros performed on 2015-02-10 15:16:26 has no hits.

BO16745.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:55:34 Download gff for BO16745.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15367-PA 1..528 17..542 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:09:31 Download gff for BO16745.5prime
Subject Subject Range Query Range Percent Splice Strand
Dip1-RA 52..580 9..541 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:52:18 Download gff for BO16745.5prime
Subject Subject Range Query Range Percent Splice Strand
Dip1-RA 52..580 9..541 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:52:18 Download gff for BO16745.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9158673..9159076 9..416 99 -> Plus
X 9159140..9159264 417..541 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:09:31 Download gff for BO16745.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9052706..9053109 9..416 99 -> Plus
arm_X 9053173..9053297 417..541 100   Plus

BO16745.complete Sequence

559 bp assembled on 2007-10-17

GenBank Submission: FJ633897

> BO16745.complete
GAAGTTATCAGTCGACATGGACATATTCGAGAGCTTCTGTCGCACGTGCG
GAAACGAATGCCTGGAATCGCTGTCCATTTACAATGAGTGTGCCCAAGTG
CTTGACCAGATGGTGCCCATTGCGGATATGCTAGCGTCCTGCCTGCCCGC
CTCCTTGCCGCCACTGGACCCAGAGGACGACTATCCCAAACAGATCTGCC
GCATCTGCGTGAAGAAGCTGTCGATGGCCTACGAGTTCAGCCACCAGTGG
CTGGGCGCCCACGGCGAGTTCAACGTGGCCCTAAAGTTCGAGCAGCGCCG
AAGGCGCAGCCAGGCCAGCAAATCCCAGTCGCACACGCAAACCCAAACTC
ATCCGGTGGAACCGAAGAATGAGCAACTGCCCACGGTGCTGGCGGAAGCA
GTGTCGACCAAAAGAGCTGCTACTCCCACCAACGAGTTCAGCAGCGACTC
CGGACCGGCCTTCAAGTGCGGCTTCTGCGGCGAATGTTTTTACACGGAGA
AGGCCTGCAAATTTCACTTAAAGTTCTCGCACAAGGATCTTGCAAGCTTT
CTAGACCAT

BO16745.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:07:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dip1-RA 528 CG15367-PA 1..525 17..541 2625 100 Plus
Dip1-RB 531 CG15367-PB 1..528 17..541 2560 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:07:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dip1-RA 691 CG15367-RA 56..580 17..541 2625 100 Plus
Dip1-RB 694 CG15367-RB 56..583 17..541 2560 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:07:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9158677..9159076 17..416 2000 100 Plus
X 23542271 X 9159138..9159264 415..541 635 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:07:21 has no hits.

BO16745.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:03:14 Download gff for BO16745.complete
Subject Subject Range Query Range Percent Splice Strand
Dip1-RA 1..528 17..542 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:16:50 Download gff for BO16745.complete
Subject Subject Range Query Range Percent Splice Strand
Dip1-RA 23..551 9..541 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:29 Download gff for BO16745.complete
Subject Subject Range Query Range Percent Splice Strand
Dip1-RA 56..580 17..543 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:46:50 Download gff for BO16745.complete
Subject Subject Range Query Range Percent Splice Strand
Dip1-RA 27..551 17..543 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:11:10 Download gff for BO16745.complete
Subject Subject Range Query Range Percent Splice Strand
Dip1-RA 56..580 17..543 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:11:10 Download gff for BO16745.complete
Subject Subject Range Query Range Percent Splice Strand
X 9158677..9159076 17..416 100 -> Plus
X 9159140..9159264 417..543 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:29 Download gff for BO16745.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9052710..9053109 17..416 100 -> Plus
arm_X 9053173..9053297 417..543 98   Plus

BO16745.pep Sequence

Translation from 16 to 559

> BO16745.pep
MDIFESFCRTCGNECLESLSIYNECAQVLDQMVPIADMLASCLPASLPPL
DPEDDYPKQICRICVKKLSMAYEFSHQWLGAHGEFNVALKFEQRRRRSQA
SKSQSHTQTQTHPVEPKNEQLPTVLAEAVSTKRAATPTNEFSSDSGPAFK
CGFCGECFYTEKACKFHLKFSHKDLASFLDH

BO16745.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:28:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dip1-PA 175 CG15367-PA 1..175 1..175 947 100 Plus
Dip1-PB 176 CG15367-PB 1..176 1..175 935 99.4 Plus