Clone Sequence Records
BO16764.3prime Sequence
710 bp (668 high quality bases) assembled on 2006-10-13
> BO16764.3prime
ATGGTCTAGAAAGCTTGCCAGTTCCTCCTTTTCCGGCGCTGTCTTGGTGA
CCTTGTGAACCCTGAAGACTTCCAGGATGTTCAGTTTCCTCAGCAGCTCC
TCCTTCTTGGCCTCGGTGACCTTGCCGGCCTTGAGGCGCAGGAGTCGCTT
GGTCTCCTCCTCCAGGAAATCGTAGCCCACCTCGTGGATCTTCCGCATGT
AGATCAGATAGGCCCTGGCGTTCTGCTGCTGCTCGGGATCGGTCAGCTGC
TCCTGCTTGGCCTGCAGCTTTTCGATAAGCTTCAGTTGCTCTGCATCGGG
GATATTGGCATAGTTCTTGAGCACTTCGTTGAACTCTTTGATGCAGCCAT
CACGACCGATGTACAGAGGTGTGTTGGCACTGACAAAAGCCTTCAGATTG
TCCAGCGTTACGTCGACGTGGCTAGGAAGCTGGACGTACTCATCAGCGTT
GCCCTTGAACAGGAAGATACTCGGGAAGTTCTTGTCGTCGACTTTGTAAC
GGTCGCCCAGGGCCTTGTTCTCCAGTTCTCCATAGTCCTTGACACCCACG
GTGGCTATTAGCAGATCTTTAGTTGCCTTGTGGGCAGATTTGGAGAAGGC
GGTAAAGGCCTCATGCTTTTCCCCATACGGATATGCGATATCAAATTTCA
CTACGGAGTAGGGAAATCGTTCCACCGTCTTCTCGAAACTCAGCTCATCC
AGATCCACGC
BO16764.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 16:31:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7225-PA | 774 | wbl-RA | 80..771 | 710..19 | 3460 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 11:21:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wbl-RB | 1319 | CG7225-RB | 510..1201 | 710..19 | 3460 | 100 | Minus |
wbl-RA | 953 | CG7225-RA | 144..835 | 710..19 | 3460 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 11:21:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19250303..19250799 | 515..19 | 2485 | 100 | Minus |
2R | 25286936 | 2R | 19249904..19250101 | 710..513 | 990 | 100 | Minus |
Blast to na_te.dros performed 2015-02-08 11:21:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2754..2867 | 321..209 | 151 | 65.8 | Minus |
BO16764.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:55:59 Download gff for
BO16764.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7225-PA | 80..774 | 16..710 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:33:07 Download gff for
BO16764.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 144..848 | 5..710 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:38:54 Download gff for
BO16764.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 144..848 | 5..710 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:38:54 Download gff for
BO16764.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19249904..19250100 | 514..710 | 100 | -> | Minus |
2R | 19250305..19250812 | 5..513 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:33:07 Download gff for
BO16764.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15137409..15137605 | 514..710 | 100 | -> | Minus |
arm_2R | 15137810..15138317 | 5..513 | 99 | | Minus |
BO16764.5prime Sequence
650 bp (624 high quality bases) assembled on 2006-10-13
> BO16764.5prime
GAAGTTATCACTCGACATGATGCATATTTTGGTGACTCTGCTCCTGGTCG
CTATCCACTCGATACCCACCACCTGGGCCGTCACCTGCACGGGCTGCGTG
GATCTGGATGAGCTGAGTTTCGAGAAGACGGTGGAACGATTTCCCTACTC
CGTAGTGAAATTTGATATCGCATATCCGTATGGGGAAAAGCATGAGGCCT
TTACCGCCTTCTCCAAATCTGCCCACAAGGCAACTAAAGATCTGCTAATA
GCCACCGTGGGTGTCAAGGACTATGGAGAACTGGAGAACAAGGCCCTGGG
CGACCGTTACAAAGTCGACGACAAGAACTTCCCGAGTATCTTCCTGTTCA
AGGGCAACGCTGATGAGTACGTCCAGCTTCCTAGCCACGTCGACGTAACG
CTGGACAATCTGAAGGCTTTTGTCAGTGCCAACACACCTCTGTACATCGG
TCGTGATGGCTGCATCAAAGAGTTCAACGAAGTGCTCAAGAACTATGCCA
ATATCCCCGATGCAGAGCAACTGAAGCTTATCGAAAAGCTGCAGGCCAAG
CAGGAGCAGCTGACCGATCCCGAGCAGCAGCAGAACGCCAGGGCCTATCT
GATCTACATGCGGAAGATCCACGAGGTGGGCTACGATTTCCTGGAGGAGG
BO16764.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 16:31:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7225-PA | 774 | wbl-RA | 1..634 | 17..650 | 3170 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:16:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wbl-RB | 1319 | CG7225-RB | 431..1064 | 17..650 | 3170 | 100 | Plus |
wbl-RA | 953 | CG7225-RA | 65..698 | 17..650 | 3170 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:16:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19250303..19250662 | 291..650 | 1800 | 100 | Plus |
2R | 25286936 | 2R | 19249825..19250101 | 17..293 | 1385 | 100 | Plus |
Blast to na_te.dros performed 2015-02-10 23:16:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2754..2867 | 485..597 | 151 | 65.8 | Plus |
BO16764.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:56:01 Download gff for
BO16764.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7225-PA | 1..634 | 17..650 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:01:36 Download gff for
BO16764.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 65..698 | 17..650 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:29:05 Download gff for
BO16764.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 65..698 | 17..650 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:29:05 Download gff for
BO16764.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19249825..19250100 | 17..292 | 100 | -> | Plus |
2R | 19250305..19250662 | 293..650 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:01:36 Download gff for
BO16764.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15137330..15137605 | 17..292 | 100 | -> | Plus |
arm_2R | 15137810..15138167 | 293..650 | 100 | | Plus |
BO16764.complete Sequence
805 bp assembled on 2008-08-15
GenBank Submission: FJ633905
> BO16764.complete
GAAGTTATCACTCGACATGATGCATATTTTGGTGACTCTGCTCCTGGTCG
CTATCCACTCGATACCCACCACCTGGGCCGTCACCTGCACGGGCTGCGTG
GATCTGGATGAGCTGAGTTTCGAGAAGACGGTGGAACGATTTCCCTACTC
CGTAGTGAAATTTGATATCGCATATCCGTATGGGGAAAAGCATGAGGCCT
TTACCGCCTTCTCCAAATCTGCCCACAAGGCAACTAAAGATCTGCTAATA
GCCACCGTGGGTGTCAAGGACTATGGAGAACTGGAGAACAAGGCCCTGGG
CGACCGTTACAAAGTCGACGACAAGAACTTCCCGAGTATCTTCCTGTTCA
AGGGCAACGCTGATGAGTACGTCCAGCTTCCTAGCCACGTCGACGTAACG
CTGGACAATCTGAAGGCTTTTGTCAGTGCCAACACACCTCTGTACATCGG
TCGTGATGGCTGCATCAAAGAGTTCAACGAAGTGCTCAAGAACTATGCCA
ATATCCCCGATGCAGAGCAACTGAAGCTTATCGAAAAGCTGCAGGCCAAG
CAGGAGCAGCTGACCGATCCCGAGCAGCAGCAGAACGCCAGGGCCTATCT
GATCTACATGCGGAAGATCCACGAGGTGGGCTACGATTTCCTGGAGGAGG
AGACCAAGCGACTCCTGCGCCTCAAGGCCGGCAAGGTCACCGAGGCCAAG
AAGGAGGAGCTGCTGAGGAAACTGAACATCCTGGAAGTCTTCAGGGTTCA
CAAGGTCACCAAGACAGCGCCGGAAAAGGAGGAACTGGCAAGCTTTCTAG
ACCAT
BO16764.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:50:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wbl-RB | 774 | CG7225-PB | 1..771 | 17..787 | 3855 | 100 | Plus |
wbl-RA | 774 | CG7225-PA | 1..771 | 17..787 | 3855 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:50:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wbl-RB | 1319 | CG7225-RB | 431..1201 | 17..787 | 3855 | 100 | Plus |
wbl-RA | 953 | CG7225-RA | 65..835 | 17..787 | 3855 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:50:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19250303..19250799 | 291..787 | 2485 | 100 | Plus |
2R | 25286936 | 2R | 19249825..19250101 | 17..293 | 1385 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 06:50:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2754..2867 | 485..597 | 151 | 65.8 | Plus |
BO16764.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:44:36 Download gff for
BO16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 65..848 | 17..801 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:55:57 Download gff for
BO16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 65..835 | 17..789 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:56:22 Download gff for
BO16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 65..835 | 17..789 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:55:42 Download gff for
BO16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wbl-RA | 65..835 | 17..789 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:55:42 Download gff for
BO16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19249825..19250100 | 17..292 | 100 | -> | Plus |
2R | 19250305..19250799 | 293..789 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:55:57 Download gff for
BO16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15137330..15137605 | 17..292 | 100 | -> | Plus |
arm_2R | 15137810..15138304 | 293..789 | 99 | | Plus |
BO16764.pep Sequence
Translation from 16 to 805
> BO16764.pep
MMHILVTLLLVAIHSIPTTWAVTCTGCVDLDELSFEKTVERFPYSVVKFD
IAYPYGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKV
DDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSANTPLYIGRDGCI
KEFNEVLKNYANIPDAEQLKLIEKLQAKQEQLTDPEQQQNARAYLIYMRK
IHEVGYDFLEEETKRLLRLKAGKVTEAKKEELLRKLNILEVFRVHKVTKT
APEKEELASFLDH
BO16764.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:41:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wbl-PB | 257 | CG7225-PB | 1..257 | 1..257 | 1320 | 100 | Plus |
wbl-PA | 257 | CG7225-PA | 1..257 | 1..257 | 1320 | 100 | Plus |