Clone Sequence Records
BO16826.3prime Sequence
506 bp (506 high quality bases) assembled on 2006-10-13
> BO16826.3prime
ATGGTCTAGAAAGCTTGCTTCGGGGTGGTTGATAATATATTCGTAGACCA
GGTGTGCACGATGCAGCGCCAGGCCCGTGATCACTCTCCTCACATCTTTG
AGCTTCAACTTGGGTGCCCTACGGGAGCGGATCATGGTGGACACGACCAC
TGGTAGCCTGTTCCGGAGAGGGAGTGGTGATTGCATCATCATGAACGTTT
TATGCACCACATTTTGCATCTGTAGGTTGATGACCTTCACGATCCGTGCC
GCATAGTCCATACTCTGCTTTTGGGTTAGCGCTTCGGGATTATTGGGCGC
TTTGGTCGCTTTGGGTACAACTGCCGCAGGCGGTGGATCTTCCTTCGAAA
CAGATTGACCCTCGAGGTTCTTTTCCTCGCCGGCAATGTCGACATCATTC
GGGGTAGCCAATTCAGAGAGTGTGTCCTCACTGAGCAGCTCCTTCAAAGA
TAGTTTCTCCATATTCGCGAGTTCTTTGTTCATGTTCTCCATGTCGACTG
ATAACT
BO16826.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:10:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15882-PA | 477 | CG15882-RA | 1..474 | 492..19 | 2370 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:08:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15882-RA | 634 | CG15882-RA | 113..586 | 492..19 | 2370 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:08:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19123803..19124276 | 19..492 | 2370 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:08:52 has no hits.
BO16826.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:57:18 Download gff for
BO16826.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15882-PA | 1..477 | 15..492 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:01:29 Download gff for
BO16826.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15882-RA | 106..590 | 14..500 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:57:46 Download gff for
BO16826.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15882-RA | 106..590 | 14..500 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 10:57:46 Download gff for
BO16826.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19123799..19124283 | 14..500 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:01:29 Download gff for
BO16826.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19017832..19018316 | 14..500 | 98 | | Plus |
BO16826.5prime Sequence
506 bp (506 high quality bases) assembled on 2006-10-13
> BO16826.5prime
GAAGTTATCAGTCGACATGGAGAACATGAACAAAGAACTCGCGAATATGG
AGAAACTATCTTTGAAGGAGCTGCTCAGTGAGGACACACTCTCTGAATTG
GCTACCCCGAATGATGTCGACATTGCCGGCGAGGAAAAGAACCTCGAGGG
TCAATCTGTTTCGAAGGAAGATCCACCGCCTGCGGCAGTTGTACCCAAAG
CGACCAAAGCGCCCAATAATCCCGAAGCGCTAACCCAAAAGCAGAGTATG
GACTATGCGGCACGGATCGTGAAGGTCATCAACCTACAGATGCAAAATGT
GGTGCATAAAACGTTCATGATGATGCAATCACCACTCCCTCTCCGGAACA
GGCTACCAGTGGTCGTGTCCACCATGATCCGCTCCCGTAGGGCACCCAAG
TTGAAGCTCAAAGATGTGAGGAGAGTGATCACGGGCCTGGCGCTGCATCG
TGCACACCTGGTCTACGAATATATTATCAACCACCCCGAAGCAAGCTTTC
TAGACC
BO16826.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:10:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15882-PA | 477 | CG15882-RA | 1..474 | 17..490 | 2370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:19:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15882-RA | 634 | CG15882-RA | 113..586 | 17..490 | 2370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:19:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19123803..19124276 | 490..17 | 2370 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-06 10:19:39 has no hits.
BO16826.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:57:19 Download gff for
BO16826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15882-PA | 1..477 | 17..494 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:40:27 Download gff for
BO16826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15882-RA | 106..590 | 9..495 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:25:32 Download gff for
BO16826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15882-RA | 106..590 | 9..495 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:25:32 Download gff for
BO16826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19123799..19124283 | 9..495 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:40:27 Download gff for
BO16826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19017832..19018316 | 9..495 | 98 | | Minus |
BO16826.complete Sequence
508 bp assembled on 2006-10-11
GenBank Submission: FJ633933
> BO16826.complete
GAAGTTATCAGTCGACATGGAGAACATGAACAAAGAACTCGCGAATATGG
AGAAACTATCTTTGAAGGAGCTGCTCAGTGAGGACACACTCTCTGAATTG
GCTACCCCGAATGATGTCGACATTGCCGGCGAGGAAAAGAACCTCGAGGG
TCAATCTGTTTCGAAGGAAGATCCACCGCCTGCGGCAGTTGTACCCAAAG
CGACCAAAGCGCCCAATAATCCCGAAGCGCTAACCCAAAAGCAGAGTATG
GACTATGCGGCACGGATCGTGAAGGTCATCAACCTACAGATGCAAAATGT
GGTGCATAAAACGTTCATGATGATGCAATCACCACTCCCTCTCCGGAACA
GGCTACCAGTGGTCGTGTCCACCATGATCCGCTCCCGTAGGGCACCCAAG
TTGAAGCTCAAAGATGTGAGGAGAGTGATCACGGGCCTGGCGCTGCATCG
TGCACACCTGGTCTACGAATATATTATCAACCACCCCGAAGCAAGCTTTC
TAGACCAT
BO16826.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:36:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15882-RA | 477 | CG15882-PA | 1..474 | 17..490 | 2370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:36:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15882-RA | 634 | CG15882-RA | 113..586 | 17..490 | 2370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:36:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19123803..19124276 | 490..17 | 2370 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:36:09 has no hits.
BO16826.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:07:12 Download gff for
BO16826.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15882-RA | 1..477 | 17..494 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:23:07 Download gff for
BO16826.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15882-RA | 106..590 | 9..495 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:45 Download gff for
BO16826.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15882-RA | 113..586 | 17..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:07:13 Download gff for
BO16826.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15882-RA | 106..590 | 9..495 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:51:37 Download gff for
BO16826.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15882-RA | 113..586 | 17..492 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:51:37 Download gff for
BO16826.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19123801..19124276 | 17..492 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:45 Download gff for
BO16826.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19017834..19018309 | 17..492 | 99 | | Minus |
BO16826.pep Sequence
Translation from 16 to 508
> BO16826.pep
MENMNKELANMEKLSLKELLSEDTLSELATPNDVDIAGEEKNLEGQSVSK
EDPPPAAVVPKATKAPNNPEALTQKQSMDYAARIVKVINLQMQNVVHKTF
MMMQSPLPLRNRLPVVVSTMIRSRRAPKLKLKDVRRVITGLALHRAHLVY
EYIINHPEASFLDH
BO16826.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:53:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15882-PA | 158 | CG15882-PA | 1..158 | 1..158 | 792 | 100 | Plus |
