Clone Sequence Records
BO16846.3prime Sequence
458 bp (458 high quality bases) assembled on 2006-10-13
> BO16846.3prime
ATGGTCTAGAAAGCTTGCGTGAAAATAATTGGCGAATGCCCTTCGCAACT
TGCCAAAAACGCCAAGTCCACCGGCCGTACTTCGCTCCCTTGATGGCTTG
GGATTAAGGGATGGATCATCCTCCATACGACCCACATGCCAGTGGATCTG
CACGTTGCACACCACCAGACGCTTGGCCATTAGAACGCCCAGCTGCAGAT
GCTCCGCGGTTGCGAATCTCAGCTCTAGACCATTCTTCCTTTTGCGATGC
GCGTTCATCGAACAGAAGCGTGAGAAAATGGCCAGCAATTCATCATCGGT
GCCGGATGGAAATCCGTGCAAGCTCAGCCACTCGTTGCTGGTCAGATCAT
CCGAGGAACCACCGGTTCTGGCCTGCTCCACATCCGGTTCCGGTCCCTCA
TCGCTATCACTTTCAGTTTGGCTCTGAGAACTGTACTCAGTCATGTCGAC
TGATAACT
BO16846.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:10:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-PA | 429 | CG32639-RA | 1..426 | 444..19 | 2130 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:06:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-RA | 642 | CG32639-RA | 43..469 | 445..19 | 2135 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:05:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13236098..13236524 | 19..445 | 2135 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 16:06:00 has no hits.
BO16846.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:57:47 Download gff for
BO16846.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-PA | 1..429 | 18..444 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:10:31 Download gff for
BO16846.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 34..476 | 10..452 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:42:45 Download gff for
BO16846.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 34..476 | 10..452 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:42:45 Download gff for
BO16846.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13236091..13236533 | 10..452 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:10:31 Download gff for
BO16846.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13130124..13130566 | 10..452 | 98 | | Plus |
BO16846.5prime Sequence
458 bp (458 high quality bases) assembled on 2006-10-13
> BO16846.5prime
GAAGTTATCAGTCGACATGACTGAGTACAGTTCTCAGAGCCAAACTGAAA
GTGATAGCGATGAGGGACCGGAACCGGATGTGGAGCAGGCCAGAACCGGT
GGTTCCTCGGATGATCTGACCAGCAACGAGTGGCTGAGCTTGCACGGATT
TCCATCCGGCACCGATGATGAATTGCTGGCCATTTTCTCACGCTTCTGTT
CGATGAACGCGCATCGCAAAAGGAAGAATGGTCTAGAGCTGAGATTCGCA
ACCGCGGAGCATCTGCAGCTGGGCGTTCTAATGGCCAAGCGTCTGGTGGT
GTGCAACGTGCAGATCCACTGGCATGTGGGTCGTATGGAGGATGATCCAT
CCCTTAATCCCAAGCCATCAAGGGAGCGAAGTACGGCCGGTGGACTTGGC
GTTTTTGGCAAGTTGCGAAGGGCATTCGCCAATTATTTTCACGCAAGCTT
TCTAGACC
BO16846.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:10:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-PA | 429 | CG32639-RA | 1..426 | 17..442 | 2130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:40:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-RA | 642 | CG32639-RA | 43..469 | 16..442 | 2135 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:40:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13236098..13236524 | 442..16 | 2135 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-03 06:40:05 has no hits.
BO16846.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:57:48 Download gff for
BO16846.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-PA | 1..429 | 17..443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:30:16 Download gff for
BO16846.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 34..476 | 9..451 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:38:30 Download gff for
BO16846.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 34..476 | 9..451 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:38:30 Download gff for
BO16846.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13236091..13236533 | 9..451 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:30:16 Download gff for
BO16846.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13130124..13130566 | 9..451 | 98 | | Minus |
BO16846.complete Sequence
460 bp assembled on 2006-10-11
GenBank Submission: FJ633943
> BO16846.complete
GAAGTTATCAGTCGACATGACTGAGTACAGTTCTCAGAGCCAAACTGAAA
GTGATAGCGATGAGGGACCGGAACCGGATGTGGAGCAGGCCAGAACCGGT
GGTTCCTCGGATGATCTGACCAGCAACGAGTGGCTGAGCTTGCACGGATT
TCCATCCGGCACCGATGATGAATTGCTGGCCATTTTCTCACGCTTCTGTT
CGATGAACGCGCATCGCAAAAGGAAGAATGGTCTAGAGCTGAGATTCGCA
ACCGCGGAGCATCTGCAGCTGGGCGTTCTAATGGCCAAGCGTCTGGTGGT
GTGCAACGTGCAGATCCACTGGCATGTGGGTCGTATGGAGGATGATCCAT
CCCTTAATCCCAAGCCATCAAGGGAGCGAAGTACGGCCGGTGGACTTGGC
GTTTTTGGCAAGTTGCGAAGGGCATTCGCCAATTATTTTCACGCAAGCTT
TCTAGACCAT
BO16846.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:47:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-RA | 429 | CG32639-PA | 1..426 | 17..442 | 2130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:47:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-RA | 642 | CG32639-RA | 43..469 | 16..442 | 2135 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:47:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13236098..13236524 | 442..16 | 2135 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:47:39 has no hits.
BO16846.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:06:26 Download gff for
BO16846.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 1..429 | 17..443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:21:56 Download gff for
BO16846.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 1..429 | 17..443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:31:38 Download gff for
BO16846.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 44..469 | 17..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:06:27 Download gff for
BO16846.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 1..429 | 17..443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:38:02 Download gff for
BO16846.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 44..469 | 17..444 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:38:02 Download gff for
BO16846.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13236094..13236523 | 17..444 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:31:38 Download gff for
BO16846.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13130127..13130556 | 17..444 | 99 | | Minus |
BO16846.pep Sequence
Translation from 16 to 460
> BO16846.pep
MTEYSSQSQTESDSDEGPEPDVEQARTGGSSDDLTSNEWLSLHGFPSGTD
DELLAIFSRFCSMNAHRKRKNGLELRFATAEHLQLGVLMAKRLVVCNVQI
HWHVGRMEDDPSLNPKPSRERSTAGGLGVFGKLRRAFANYFHASFLDH
BO16846.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:03:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-PA | 142 | CG32639-PA | 1..142 | 1..142 | 751 | 100 | Plus |