Clone Sequence Records
BO16850.complete Sequence
352 bp assembled on 2008-11-10
GenBank Submission: KX797424
> BO16850.complete
GAAGTTATCAGTCGACATGTCTGCCTTTAAAATTGCTTATGCCTGTCGTT
ATTGTGGCAATATCGTCAGCTACAAGTCAGCCAAAGTGAATGAGACGCCC
TACGACTTGCTCCTGAGCCGTACCTTCAACCTAATCCAAGAGGACAGGAT
CAGGGAGACAAATGGGGAGCGATTCCAGAATCTGCACTGCTCCAAGTGCC
GCATGGAACTGGGTCTGCTGTGCTTGCAGAGCGAAAGGAATGTCCAACTG
AAGGGACTTTCGCTGTTGGAGAAGGTTCATCTGGTGGTGTACGACTCGTA
CGAGGTGCCATTCGAGATGGCCTCACTTCGTGACGCAAGCTTTCTAGACC
AT
BO16850.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:47:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13171-RA | 321 | CG13171-PA | 1..318 | 17..334 | 1590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:47:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13171-RA | 386 | CG13171-RA | 21..338 | 17..334 | 1590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:47:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12214030..12214347 | 17..334 | 1590 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:47:04 has no hits.
BO16850.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:17:20 Download gff for
BO16850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 1..321 | 17..337 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:14:02 Download gff for
BO16850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 27..344 | 17..336 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:27:15 Download gff for
BO16850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 1..318 | 17..336 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:11 Download gff for
BO16850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 21..338 | 17..336 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:11 Download gff for
BO16850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12214030..12214347 | 17..336 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:14:02 Download gff for
BO16850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8101535..8101852 | 17..336 | 99 | | Plus |
BO16850.5prime Sequence
350 bp (350 high quality bases) assembled on 2006-10-13
> BO16850.5prime
GAAGTTATCAGTCGACATGTCTGCCTTTAAAATTGCTTATGCCTGTCGTT
ATTGTGGCAATATCGTCAGCTACAAGTCAGCCAAAGTGAATGAGACGCCC
TACGACTTGCTCCTGAGCCGTACCTTCAACCTAATCCAAGAGGACAGGAT
CAGGGAGACAAATGGGGAGCGATTCCAGAATCTGCACTGCTCCAAGTGCC
GCATGGAACTGGGTCTGCTGTGCTTGCAGAGCGAAAGGAATGTCCAACTG
AAGGGACTTTCGCTGTTGGAGAAGGTTCATCTGGTGGTGTACGACTCGTA
CGAGGTGCCATTCGAGATGGCCTCACTTCGTGACGCAAGCTTTCTAGACC
BO16850.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 16:40:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13171-PA | 321 | CG13171-RA | 1..318 | 17..334 | 1590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 09:58:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13171-RA | 386 | CG13171-RA | 21..338 | 17..334 | 1590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 09:58:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12214030..12214347 | 17..334 | 1590 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-31 09:58:54 has no hits.
BO16850.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:57:53 Download gff for
BO16850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-PA | 1..321 | 17..337 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:30:50 Download gff for
BO16850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 23..344 | 12..334 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:40:49 Download gff for
BO16850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 17..338 | 12..334 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:40:49 Download gff for
BO16850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12214026..12214347 | 12..334 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:30:50 Download gff for
BO16850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8101531..8101852 | 12..334 | 99 | | Plus |
BO16850.pep Sequence
Translation from 16 to 352
> BO16850.pep
MSAFKIAYACRYCGNIVSYKSAKVNETPYDLLLSRTFNLIQEDRIRETNG
ERFQNLHCSKCRMELGLLCLQSERNVQLKGLSLLEKVHLVVYDSYEVPFE
MASLRDASFLDH
BO16850.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:08:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13171-PA | 106 | CG13171-PA | 1..106 | 1..106 | 550 | 100 | Plus |
