Clone Sequence Records
BO16919.complete Sequence
307 bp assembled on 2008-11-10
GenBank Submission: KX796841
> BO16919.complete
GAAGTTATCAGTCGACATGGACAGCGCCGATGAGCAGCTGCAGCTGGATC
TGGACAGGATATCGATGGAGAGTCGCCAGGCCAGCAGTTTCGATGACCTC
ATCGAGCTGACCAACAACTCGGAGCGTCTGATGGCCAGAGTCAATTCCAG
CTTGGATGACCTAAACACCGCCCTCGACAACCTGGAGGCTCGAACGGACC
GGGTTCTGGTCGAGATTCGGAGGCTAATCAGCTCGGAAATGCCGGCACAA
GGTCCGCACGATGGATGTGGCGATCCAGATGCCAGGGCGGCAAGCTTTCT
AGACCAT
BO16919.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:47:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13838-RA | 276 | CG13838-PA | 1..273 | 17..289 | 1365 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:47:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13838-RA | 429 | CG13838-RA | 93..365 | 17..289 | 1365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:47:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23042333..23042605 | 17..289 | 1365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:47:50 has no hits.
BO16919.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:18:23 Download gff for
BO16919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 82..370 | 5..295 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:38:11 Download gff for
BO16919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 93..365 | 17..291 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-11 13:12:46 Download gff for
BO16919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 93..365 | 17..291 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:08:25 Download gff for
BO16919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 93..365 | 17..291 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:08:25 Download gff for
BO16919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23042333..23042605 | 17..291 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:38:11 Download gff for
BO16919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18868055..18868327 | 17..291 | 99 | | Plus |
BO16919.3prime Sequence
305 bp (305 high quality bases) assembled on 2006-10-13
> BO16919.3prime
ATGGTCTAGAAAGCTTGCCGCCCTGGCATCTGGATCGCCACATCCATCGT
GCGGACCTTGTGCCGGCATTTCCGAGCTGATTAGCCTCCGAATCTCGACC
AGAACCCGGTCCGTTCGAGCCTCCAGGTTGTCGAGGGCGGTGTTTAGGTC
ATCCAAGCTGGAATTGACTCTGGCCATCAGACGCTCCGAGTTGTTGGTCA
GCTCGATGAGGTCATCGAAACTGCTGGCCTGGCGACTCTCCATCGATATC
CTGTCCAGATCCAGCTGCAGCTGCTCATCGGCGCTGTCCATGTCGACTGA
TAACT
BO16919.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 16:46:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13838-PA | 276 | CG13838-RA | 1..273 | 291..19 | 1365 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:07:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13838-RA | 429 | CG13838-RA | 93..365 | 291..19 | 1365 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:07:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23042333..23042605 | 291..19 | 1365 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:07:42 has no hits.
BO16919.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:59:22 Download gff for
BO16919.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-PA | 1..276 | 18..291 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:04:09 Download gff for
BO16919.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 82..370 | 13..303 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:38:32 Download gff for
BO16919.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 82..370 | 13..303 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:38:32 Download gff for
BO16919.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23042322..23042610 | 13..303 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:04:09 Download gff for
BO16919.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18868044..18868332 | 13..303 | 97 | | Minus |
BO16919.5prime Sequence
305 bp (305 high quality bases) assembled on 2006-10-13
> BO16919.5prime
GAAGTTATCAGTCGACATGGGCAGCGCCGATGAGCGGCTGCAGCTGGATC
TGGACAGGATATCGATGGAGAGTCGCCAGGCCAGCAGTTTCGATGACCTC
ATCGAGCTGACCAACAACTCGGAGCGTCTGATGGCCAGAGTCAATTCCAG
CTTGGATGACCTAAACACCGCCCTCGACAACCTGGAGGCTCGAACGGACC
GGGTTCTGGTCGAGATTCGGAGGCTAATCAGCTCGGAAATGCCGGCACAA
GGTCCGCACGATGGATGTGGCGATCCAGATGCCAGGGCGGCAAGCTTTCT
AGACC
BO16919.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 16:46:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13838-PA | 276 | CG13838-RA | 6..273 | 22..289 | 1315 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:44:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13838-RA | 429 | CG13838-RA | 93..365 | 17..289 | 1335 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:44:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23042333..23042605 | 17..289 | 1335 | 99.3 | Plus |
Blast to na_te.dros performed on 2015-02-12 03:44:53 has no hits.
BO16919.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:59:23 Download gff for
BO16919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-PA | 1..276 | 17..290 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:29:18 Download gff for
BO16919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 86..370 | 10..295 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:48:54 Download gff for
BO16919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 86..370 | 10..295 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:48:54 Download gff for
BO16919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23042326..23042610 | 10..295 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:29:18 Download gff for
BO16919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18868048..18868332 | 10..295 | 97 | | Plus |
BO16919.pep Sequence
Translation from 16 to 307
> BO16919.pep
MDSADEQLQLDLDRISMESRQASSFDDLIELTNNSERLMARVNSSLDDLN
TALDNLEARTDRVLVEIRRLISSEMPAQGPHDGCGDPDARAASFLDH
BO16919.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:05:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13838-PA | 91 | CG13838-PA | 1..91 | 1..91 | 453 | 100 | Plus |
