Clone Sequence Records
BO16963.3prime Sequence
410 bp (410 high quality bases) assembled on 2006-10-13
> BO16963.3prime
ATGGTCTAGAAAGCTTGCCGGCTTCGAATCCGAGTCCAAAGCTACCGGAC
TTTTATCCATCATGTCCGCAATTGGTTCCGTGTCCGAAAACTGACGATGC
GGCCCTCGCACGGTATTGATTAAGAGGGTGCGGTGGGGCTGGAAACTTAG
CTCGTCCGTAACTCGTGTCATGTCCTTCCCGTAGTCGGCGTCCATGTGGC
GCAAGTTGAGGAAGCTCTTGACCAGCAGGAAGGGCGGCCTTTTTAGATCG
GTCCATGAACTCTTACGGTCCTGGAGCTTTACGGGCGCAGGTCTGCGATG
GTACGGAAGCCTGTGCTCTGACATTCGTCGCCTCTGCTGTAGCCGCATCT
TAGCCTCGAATATCGGGGACCCGATGAGAAGCCGACCGGTGAACATGTCG
ACTGATAACT
BO16963.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:12:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14759-PA | 381 | CG14759-RA | 1..378 | 396..19 | 1890 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:55:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14759-RB | 557 | CG14759-RB | 110..487 | 396..19 | 1890 | 100 | Minus |
CG14759-RA | 643 | CG14759-RA | 196..573 | 396..19 | 1890 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:55:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8260036..8260413 | 396..19 | 1890 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 16:55:09 has no hits.
BO16963.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:00:22 Download gff for
BO16963.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-PA | 1..381 | 16..396 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:21:13 Download gff for
BO16963.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 192..573 | 19..404 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:05:47 Download gff for
BO16963.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 192..573 | 19..404 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:05:47 Download gff for
BO16963.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8260032..8260413 | 19..404 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:21:13 Download gff for
BO16963.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4147537..4147918 | 19..404 | 98 | | Minus |
BO16963.5prime Sequence
410 bp (410 high quality bases) assembled on 2006-10-13
> BO16963.5prime
GAAGTTATCAGTCGACATGTTCACCGGTCGGCTTCTCATCGGGTCCCCGA
TATTCGAGGCTAAGATGCGGCTACAGCAGAGGCGACGAATGTCAGAGCAC
AGGCTTCCGTACCATCGCAGACCTGCGCCCGTAAAGCTCCAGGACCGTAA
GAGTTCATGGACCGATCTAAAAAGGCCGCCCTTCCTGCTGGTCAAGAGCT
TCCTCAACTTGCGCCACATGGACGCCGACTACGGGAAGGACATGACACGA
GTTACGGACGAGCTAAGTTTCCAGCCCCACCGCACCCTCTTAATCAATAC
CGTGCGAGGGCCGCATCGTCAGTTTTCGGACACGGAACCAATTGCGGACA
TGATGGATAAAAGTCCGGTAGCTTTGGACTCGGATTCGAAGCCGGCAAGC
TTTCTAGACC
BO16963.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:12:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14759-PA | 381 | CG14759-RA | 1..378 | 17..394 | 1890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:13:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14759-RB | 557 | CG14759-RB | 110..487 | 17..394 | 1890 | 100 | Plus |
CG14759-RA | 643 | CG14759-RA | 196..573 | 17..394 | 1890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:13:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8260036..8260413 | 17..394 | 1890 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 18:13:48 has no hits.
BO16963.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:00:23 Download gff for
BO16963.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-PA | 1..381 | 17..397 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:41:51 Download gff for
BO16963.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 192..573 | 9..394 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:14:14 Download gff for
BO16963.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 192..573 | 9..394 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:14:14 Download gff for
BO16963.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8260032..8260413 | 9..394 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:41:51 Download gff for
BO16963.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4147537..4147918 | 9..394 | 98 | | Plus |
BO16963.complete Sequence
412 bp assembled on 2006-10-11
GenBank Submission: FJ633999
> BO16963.complete
GAAGTTATCAGTCGACATGTTCACCGGTCGGCTTCTCATCGGGTCCCCGA
TATTCGAGGCTAAGATGCGGCTACAGCAGAGGCGACGAATGTCAGAGCAC
AGGCTTCCGTACCATCGCAGACCTGCGCCCGTAAAGCTCCAGGACCGTAA
GAGTTCATGGACCGATCTAAAAAGGCCGCCCTTCCTGCTGGTCAAGAGCT
TCCTCAACTTGCGCCACATGGACGCCGACTACGGGAAGGACATGACACGA
GTTACGGACGAGCTAAGTTTCCAGCCCCACCGCACCCTCTTAATCAATAC
CGTGCGAGGGCCGCATCGTCAGTTTTCGGACACGGAACCAATTGCGGACA
TGATGGATAAAAGTCCGGTAGCTTTGGACTCGGATTCGAAGCCGGCAAGC
TTTCTAGACCAT
BO16963.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:50:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14759-RB | 381 | CG14759-PB | 1..378 | 17..394 | 1890 | 100 | Plus |
CG14759-RA | 381 | CG14759-PA | 1..378 | 17..394 | 1890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:50:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14759-RB | 557 | CG14759-RB | 110..487 | 17..394 | 1890 | 100 | Plus |
CG14759-RA | 643 | CG14759-RA | 196..573 | 17..394 | 1890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:50:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8260036..8260413 | 17..394 | 1890 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:50:51 has no hits.
BO16963.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:05:46 Download gff for
BO16963.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 1..381 | 17..397 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:20:51 Download gff for
BO16963.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 1..381 | 17..397 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:57 Download gff for
BO16963.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 201..573 | 22..396 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:05:47 Download gff for
BO16963.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 1..381 | 17..397 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:54:02 Download gff for
BO16963.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14759-RA | 201..573 | 22..396 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:54:02 Download gff for
BO16963.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8260041..8260413 | 22..396 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:57 Download gff for
BO16963.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4147546..4147918 | 22..396 | 99 | | Plus |
BO16963.pep Sequence
Translation from 16 to 412
> BO16963.pep
MFTGRLLIGSPIFEAKMRLQQRRRMSEHRLPYHRRPAPVKLQDRKSSWTD
LKRPPFLLVKSFLNLRHMDADYGKDMTRVTDELSFQPHRTLLINTVRGPH
RQFSDTEPIADMMDKSPVALDSDSKPASFLDH
BO16963.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:47:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14759-PB | 126 | CG14759-PB | 1..126 | 1..126 | 662 | 100 | Plus |
CG14759-PA | 126 | CG14759-PA | 1..126 | 1..126 | 662 | 100 | Plus |