Clone BO17057 Report

Search the DGRC for BO17057

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:170
Well:57
Vector:pDNR-Dual
Associated Gene/TranscriptCG3777-RA
Protein status:BO17057.pep: Imported from assembly
Sequenced Size:2671

Clone Sequence Records

BO17057.complete Sequence

2671 bp assembled on 2009-10-20

GenBank Submission: KX794978

> BO17057.complete
GAAGTTATCAGTCGACATGCTTCTCAAGGTATTTTTACTGGTCTTCATCG
CCACCCACCACTTGGTAGACTCAGCGGGTCCCCTTTCCAATATAGCCAGC
GAAAGTAAACCAAAATCGTTCGAGGAGATTTTGCCTTCGGCGGTTCCCTT
TGAGACCTCACACAAACATCCGGGTGCCGGGGAGTGGGTGGAGGGATTTC
AAACCTCCCATAAAATAAGCATAAGGGCCACCGATTCCGCTGACTATTCG
ATGAATCTGCTGCCTACTAAAGAGCGACCCGAATTGAACCCCGTTTTGAG
TGCACTTATCAACGAAGATGTTATGAAGAGCATCGAGGCCAAAAGAGCCA
TAGAAGAAGAGGAGCTGGCCGAGGTTAGGCGTGAAATTGAGCAGGCCGCC
GTGTTAGAGTTGGCCCAGAAGAGGGGCTTTACCACTACTGAGACACCTGC
TCTTCTGTTGACGACTTTGCCCACAGCTGGCAAGAAGCTCGATAACTTGG
ATGAGGACATAGTCCTGGATCCTCACGAAGATTTTATCAACCAAAATTTT
GCCCTGGAGAGTGCGGGTAGTGAGAACAGCAAGAAATCCCGAATAGAGAT
TAAAAAGGGACCCAATGGCCAGGACTACGAGTACGAGTATGTCTATTACT
ATGAAGAGGACGATGACTCAAGCAAGGTGGATCCATCTGCAGAGCCCGAC
ACGCGTGGTAAGACTAGATATACCAATATCGAGAGGAGCACGACGGCCAC
TCCGAGTGGAAATAGCCTACAGAGTGACAAGGCCAAAGGAAGATCATCTG
ATACCTCTGAAGATATAGAGGCTGAACGGCTTCCGATGATCACTCGGTTT
CCCAGTCGTGGCAAGAACATTGAAGTGCCACCAACAGCAGCTCTTGATTC
TTTGGAAATCGCTGCCGAGCGCAAGAAGATTAGTGTTAAGCGCCCCAGTT
TGGAGTTGGTGGATAGTGCTACCTTCAACACGGATGAGAAACAGACCAAG
GCAGCTCGCAAGGGTGAAAATGAATTAAAACCAGTAATTGCTATCGAACA
GGAGGAGGCAGCCAGAAAGAAAATGCAACAGGTTAAGGAGGAGCAGGCAA
GGAAAGAGAAGGAGACCGAAATGTCAATCGATCAGGAGGATTTTGAGCAG
ACCACGCCGTCCATGGAGAAGGCCGCTCTAGATCTTTATGCCATATTGAC
CAATGAAAACCTCAATAACGAACAAACTACTGTAATTCCGGATACCGTAG
GTTCAGAGGGTTTCACCACTTTGGCAACAGAAACTGCAAGTACTGATGAG
GATGAGGCCGGTGTCATGACCACGCTGATTAATGAGATTTCATCGAGTAC
CAGCACCACTACGACGGCAGCAACAACCACCACGACTACAACAACAACGG
AACCACCTACAACAACCTCCACCACTACAACAACCACGGCTGCTCCCTCT
CTTTTTGGTGGAAGGAGAGCCGGCTTGAGTGGTTTGGGCGGACGTAATCG
CTTTAAGTTAACCAGGGCTGAAGGTGGCAGCACCACCACTAGCACCACTG
AGGCATCGGTGGCTGCAGAAACAAACAAGACTGGTAGAAATCGTTTTTCG
CGCCCCTCGATAGGAGGGCGTTCTCGACCCGGAGCTCGTACCACCACAGC
ACCAGATGCCACATCAGTAGCTGCCCCTGACGCCGAGGAGGGTATAGTGG
TTGCCAAGGAAGTCAAGCCTGTCAGTACGTCCTTCGCACGAGGAAGACCT
CGCAACCGCTTCAGCTTGCGCGTCTCAACCACGACTGCGCGACCCAGCGA
GGAATCTCCAGCTGAAGATGACGCCCCCGCCGAATCTTCATCAACGACTA
CAAGAAGCACATTGAGGGGTCGTCCCGGACTTGGATTACGTGGACGCAGT
CGTACAACCACTACAAAGGCACCCGCTAGTTCAGAGGGTGCCGAAGCGGT
AGAGCCTAATGCCACTGCTAGTTCCGAAGACGTCAAGTCCGGGTTGATTT
CGCCTTCTACCGGGGAATCAGGGCGTCCGTCCCGTTTTAACATTCACCGC
GCTGGTAGCAATCGTCTGTTATCCCGCGGAAAACTGGGAAGATCGGGAGT
AAGCACGGAAGCACCCAAGGAAAGTCAAACTGCCGAGGATTCCGCCGCCG
AAAGCAGTAGTCACCTCAACGACGTCAAAGAGGAGCAGATGTCCGCTGGC
GAGTTTAGCGAAAAGACGAACGAAGCAGGTGATTCCGCTGCCGTCGTTCC
AGCGGCTCCTGTATCCGGGTTAAATCGTCTTAGAACTCGACCACGTCTCA
ACGCCCTAACGCATAAGACTGATGCGGTTAAGCCTAAGGCATCCGCAGCC
CCCGCCCCCGCGCCAAGGAAGATTAATCCTCTGTTGGCAAAGCGACGACT
CCAACTGGGAGCCACTTCCACCACAGAGTCCCCCGCTGAGGAGGAGCATT
TAGCGCTGGACTCCTCCGCGGAGCAGTCCGACAAAGAGGAGTCGTTTGCC
GGAGGAAGCAACGAGACGGGCGGAGAAGGCCCCGGAAAGCCGGAGCATGA
AACTACGGAAGCGACGGAGGCAACAACTAAGCAGCAGCCCCGCGGTCTTG
GACTTTTAGGACAGCGTCGTCGTCTGCCGCTCCGCAAACCCGGAACGATC
CTGGCAAGCTTTCTAGACCAT

BO17057.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:06:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG3777-RE 2640 CG3777-PE 1..2637 17..2653 13185 100 Plus
CG3777-RD 2640 CG3777-PD 1..2637 17..2653 13185 100 Plus
CG3777-RC 2640 CG3777-PC 1..2637 17..2653 13185 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:07:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG3777-RE 3428 CG3777-RE 260..2896 17..2653 13185 100 Plus
CG3777-RD 4130 CG3777-RD 660..3296 17..2653 13185 100 Plus
CG3777-RC 3402 CG3777-RC 234..2870 17..2653 13185 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:06:57
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 346149..347707 31..1589 7795 100 Plus
X 23542271 X 348647..349324 1749..2426 3390 100 Plus
X 23542271 X 349440..349670 2423..2653 1155 100 Plus
X 23542271 X 348080..348238 1590..1748 795 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:06:58 has no hits.

BO17057.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-20 10:49:41 Download gff for BO17057.complete
Subject Subject Range Query Range Percent Splice Strand
CG3777-RC 230..2866 17..2655 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:05:40 Download gff for BO17057.complete
Subject Subject Range Query Range Percent Splice Strand
CG3777-RA 208..2844 17..2655 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:03:19 Download gff for BO17057.complete
Subject Subject Range Query Range Percent Splice Strand
CG3777-RC 234..2870 17..2655 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:03:19 Download gff for BO17057.complete
Subject Subject Range Query Range Percent Splice Strand
X 346149..347707 31..1589 100 -> Plus
X 348080..348238 1590..1748 100 -> Plus
X 348647..349324 1749..2426 100 -> Plus
X 349444..349670 2427..2655 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:05:40 Download gff for BO17057.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 240182..241740 31..1589 100 -> Plus
arm_X 242113..242271 1590..1748 100 -> Plus
arm_X 242680..243357 1749..2426 100 -> Plus
arm_X 243477..243703 2427..2655 99   Plus

BO17057.3prime Sequence

661 bp (581 high quality bases) assembled on 2006-10-13

> BO17057.3prime
ATGGTCTAGAAAGCTTGCCAGGATCGTTCCGGGTTTGCGGAGCGGCAGAC
GACGACGCTGTCCTAAAAGTCCAAGACCGCGGGGCTGCTGCTTAGTTGTT
GCCTCCGTCGCTTCCGTAGTTTCATGCTCCGGCTTTCCGGGGCCTTCTCC
GCCCGTCTCGTTGCTTCCTCCGGCAAACGACTCCTCTTTGTCGGACTGCT
CCGCGGAGGAGTCCAGCGCTAAATGCTCCTCCTCAGCGGGGGACTCTGTG
GTGGAAGTGGCTCCCAGTTGGAGTCGTCGCTTTGCCAACAGAGGATTAAT
CTTCCTTGGCGCGGGGGCGGGGGCTGCGGATGCCTTAGGCTTAACCGCAT
CAGTCTTATGCGTTAGGGCGTTGAGACGTGGTCGAGTTCTAAGACGATTT
AACCCGGATACAGGAGCCGCTGGAACGACGGCAGCGGAATCACCTGCTTC
GTTCGTCTTTTCGCTAAACTCGCCAGCGGACATCTGCTCCTCTTTGACGT
CGTTGAGGTGACTACTGCTTTCGGCGGCGGAATCCTCGGCAGTTTGACTT
TCCTTGGGTGCTTCCGTGCTTACTCCCGATCTTTCCAGTTTTCCGCGGGA
TAACAGACGATTGCTACCAGCGCGGTGAATGTTAAAACGGGACGGACGCC
CTGATTCCCCG

BO17057.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 17:02:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG3777-PB 2640 CG3777-RB 1995..2637 661..19 3190 99.8 Minus
CG3777-PA 2640 CG3777-RA 1995..2637 661..19 3190 99.8 Minus
CG3777-PC 2640 CG3777-RC 1995..2637 661..19 3190 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:45:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG3777-RE 3428 CG3777-RE 2254..2896 661..19 3200 99.8 Minus
CG3777-RD 4130 CG3777-RD 2654..3296 661..19 3200 99.8 Minus
CG3777-RC 3402 CG3777-RC 2228..2870 661..19 3200 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:45:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 348909..349324 661..246 2065 99.8 Minus
X 23542271 X 349440..349670 249..19 1155 100 Minus
Blast to na_te.dros performed on 2015-02-12 10:45:35 has no hits.

BO17057.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:02:01 Download gff for BO17057.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3777-PC 1995..2640 15..661 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 21:32:28 Download gff for BO17057.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3777-RA 2202..2847 15..661 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:16:29 Download gff for BO17057.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3777-RC 2228..2873 15..661 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:16:29 Download gff for BO17057.3prime
Subject Subject Range Query Range Percent Splice Strand
X 349444..349673 15..245 99   Minus
X 348909..349324 246..661 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 21:32:28 Download gff for BO17057.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 242942..243357 246..661 99 -> Minus
arm_X 243477..243706 15..245 99   Minus

BO17057.5prime Sequence

651 bp (527 high quality bases) assembled on 2006-10-13

> BO17057.5prime
GAAGTTATCAGTCGACATGCTTCTCAAGGTATTTTTACTGGTCTTCATCG
CCACCCACCACTTGGTAGACTCAGCGGGTCCCCTTTCCAATATAGCCAGC
GAAAGTAAACCAAAATCGTTCGAGGAGATTTTGCCTTCGGCGGTTCCCTT
TGAGACCTCACACAAACATCCGGGTGCCGGGGAGTGGGTGGAGGGATTTC
AAACCTCCCATAAAATAAGCATAAGGGCCACCGATTCCGCTGACTATTCG
ATGAATCTGCTGCCTACTAAAGAGCGACCCGAATTGAACCCCGTTTTGAG
TGCACTTATCAACGAAGATGTTATGAAGAGCATCGAGGCCAAAAGAGCCA
TAGAAGAAGAGGAGCTGGCCGAGGTTAGGCGTGAAATTGAGCAGGCCGCC
GTGTTAGAGTTGGCCCAGAAGAGGGGCTTTACCACTACTGAGACACCTGC
TCTTCTGTTGACGACTTTGCCCACAGCTGGCAAGAAGCTCGATAACTTGG
ATGAGGACATAGTCCTGGATCCTCACGAAGATTTTATCAACCAAAATTTT
GCCCTGAAGAGTGCGGGTAGTGAGAACAGCAAGAAATCCCGAATAAAGAT
TAAAAAGGGACCCAATGGCCAGGACTACGAGTACGAGTATGTCTATTACT
A

BO17057.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 17:02:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG3777-PB 2640 CG3777-RB 1..635 17..651 3125 99.6 Plus
CG3777-PA 2640 CG3777-RA 1..635 17..651 3125 99.6 Plus
CG3777-PC 2640 CG3777-RC 1..635 17..651 3125 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:15:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG3777-RE 3428 CG3777-RE 260..894 17..651 3145 99.7 Plus
CG3777-RD 4130 CG3777-RD 660..1294 17..651 3145 99.7 Plus
CG3777-RC 3402 CG3777-RC 234..868 17..651 3145 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:15:45
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 346149..346769 31..651 3075 99.7 Plus
Blast to na_te.dros performed on 2015-02-13 06:15:46 has no hits.

BO17057.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:02:02 Download gff for BO17057.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3777-PC 1..634 17..650 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 19:14:58 Download gff for BO17057.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3777-RA 200..841 7..650 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:19:58 Download gff for BO17057.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3777-RC 226..867 7..650 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:19:58 Download gff for BO17057.5prime
Subject Subject Range Query Range Percent Splice Strand
X 346149..346768 31..650 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 19:14:58 Download gff for BO17057.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 240182..240801 31..650 99   Plus

BO17057.pep Sequence

Translation from 16 to 2671

> BO17057.pep
MLLKVFLLVFIATHHLVDSAGPLSNIASESKPKSFEEILPSAVPFETSHK
HPGAGEWVEGFQTSHKISIRATDSADYSMNLLPTKERPELNPVLSALINE
DVMKSIEAKRAIEEEELAEVRREIEQAAVLELAQKRGFTTTETPALLLTT
LPTAGKKLDNLDEDIVLDPHEDFINQNFALESAGSENSKKSRIEIKKGPN
GQDYEYEYVYYYEEDDDSSKVDPSAEPDTRGKTRYTNIERSTTATPSGNS
LQSDKAKGRSSDTSEDIEAERLPMITRFPSRGKNIEVPPTAALDSLEIAA
ERKKISVKRPSLELVDSATFNTDEKQTKAARKGENELKPVIAIEQEEAAR
KKMQQVKEEQARKEKETEMSIDQEDFEQTTPSMEKAALDLYAILTNENLN
NEQTTVIPDTVGSEGFTTLATETASTDEDEAGVMTTLINEISSSTSTTTT
AATTTTTTTTTEPPTTTSTTTTTTAAPSLFGGRRAGLSGLGGRNRFKLTR
AEGGSTTTSTTEASVAAETNKTGRNRFSRPSIGGRSRPGARTTTAPDATS
VAAPDAEEGIVVAKEVKPVSTSFARGRPRNRFSLRVSTTTARPSEESPAE
DDAPAESSSTTTRSTLRGRPGLGLRGRSRTTTTKAPASSEGAEAVEPNAT
ASSEDVKSGLISPSTGESGRPSRFNIHRAGSNRLLSRGKLGRSGVSTEAP
KESQTAEDSAAESSSHLNDVKEEQMSAGEFSEKTNEAGDSAAVVPAAPVS
GLNRLRTRPRLNALTHKTDAVKPKASAAPAPAPRKINPLLAKRRLQLGAT
STTESPAEEEHLALDSSAEQSDKEESFAGGSNETGGEGPGKPEHETTEAT
EATTKQQPRGLGLLGQRRRLPLRKPGTILASFLDH

BO17057.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:23:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG3777-PE 879 CG3777-PE 1..879 1..879 4394 100 Plus
CG3777-PD 879 CG3777-PD 1..879 1..879 4394 100 Plus
CG3777-PC 879 CG3777-PC 1..879 1..879 4394 100 Plus
CG3777-PA 879 CG3777-PA 1..879 1..879 4394 100 Plus
CG3777-PB 879 CG3777-PB 1..879 1..879 4394 100 Plus