Clone BO17094 Report

Search the DGRC for BO17094

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:170
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG31798-RA
Protein status:BO17094.pep: validated full length
Sequenced Size:1507

Clone Sequence Records

BO17094.3prime Sequence

840 bp (769 high quality bases) assembled on 2006-10-13

> BO17094.3prime
ATGGTCTAGAAAGCTTGCGATATCTCCCTCAGCCAGTTTGAATGTCTTGA
GATCGATATCGTCATAGGGAGCCACATCGTGACCAGGATCCTCCTTCTCC
TCATCCAGCAGACAGTATATGCTATCCGTTTCCTGTTTGATGATCTCGTC
ACCCAGTCGCTTCCAAAAAGGACGACAGCGGTTCTTCCACTGACGCAGGT
TGAAAAAGGCGCAATAGCGAGTGGTAGACGACTTAAGCATGGCCATATAA
AGTGGTGTGATTTCATCCGCCATTAACTTGGCCTGCAGATAGTTGGCCAT
CTTGCGGCTGTGCAGATCGTTAAAGTCGACGTAGATGCGCTTGGCATGCT
CATAGCATTTCTTAGCGATACTTGTCATCTGTGTGTCCTTGGCAAAGATC
TTTCCCAGATGCAAAAGTATCTCTGCCTCCAAATCGCGGTGGGTATAGAG
TCGGGATAAGCGAAGAGCTCTCTTGTAACACGAAGTGGCCTTCTCCACGT
GCTCAAAAATCTCGGAACATTGCCCTTGGATCAGGTAGTACTTAATGTTG
AGCTTAACGAATCGATATTCGGTGCAGGCCAGGATCTGGGTTTTGATCTG
CTCAAGGCACTGCTGCGCCGAGTTAAAGTTACCAATCTCCATTAGAAAGT
AGGCACGCTCCAGAAAAGTGTCACAGAAAATCTCCATGTTCTTATCCCTG
CCAATTTCGGCTATTAGTACAGTGGCTCGTCGGGCCATGGCCACCGCATC
CTCGGGATGCTGGCGTACAATGGACTTGCCCTGGATGAGGAGCTGCCTGG
CGAGATTCTGGGCCACAGCTCGTGAAGCGTAAGACTGCCT

BO17094.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:12:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG31798-PA 1476 CG31798-RA 676..1473 816..19 3990 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:31:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG31798-RB 1643 CG31798-RB 720..1542 840..19 4075 99.8 Minus
CG31798-RA 1913 CG31798-RA 720..1542 840..19 4075 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:31:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19395323..19395819 515..19 2455 99.6 Minus
2L 23513712 2L 19395076..19395271 704..509 980 100 Minus
2L 23513712 2L 19394879..19395015 840..705 620 98.5 Minus
Blast to na_te.dros performed on 2015-02-06 10:31:36 has no hits.

BO17094.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:02:20 Download gff for BO17094.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31798-PA 651..1476 15..840 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:42:33 Download gff for BO17094.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 720..1548 11..840 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:27:05 Download gff for BO17094.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 720..1548 11..840 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:27:05 Download gff for BO17094.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 19394879..19395015 705..840 98 -> Minus
2L 19395076..19395271 509..704 100 -> Minus
2L 19395330..19395825 11..508 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:42:33 Download gff for BO17094.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19394879..19395015 705..840 98 -> Minus
arm_2L 19395076..19395271 509..704 100 -> Minus
arm_2L 19395330..19395825 11..508 99   Minus

BO17094.5prime Sequence

812 bp (761 high quality bases) assembled on 2006-10-13

> BO17094.5prime
GAAGTTATCAGTCGACATGTCCTTGCAGTGGCAAAATGAGGTGGTGCGGA
TTACGCGCCAAGTGAAGCGCAATCTACCGCACCGAAATTTCCGAGAGATT
AACTTTGATCGCGAGACCATAAGGCAAGGAATCACCCCCCTGACCTACGA
TGAGGCGCGCCGTCTTAAGGGACCAGTTTTCGAGGCTCTGGAGGATGAGT
TGCGTCGAGCAGGATGCACCATGCTGCCGGAGTTTCTCCACTGCCTGGCC
ACCAAGGAGAATGCTCTTTTCGAGAGCCTAAATATCCGGGAACGTCTATC
CGATGACTCGGAATTGCTCTACGGAATGGTGGATCGACTCCGGGATGCCG
AACTGGCTGTTTGCCTGAACAAGCACCGGGGTCTCAAAAAGTGTTTTGGC
CTATTCTTCGAGACCATGCAGCTGCTGGAGCCGTATCGTCAGAAATACGC
ATACGCCCTGGTGGCCCTCAATGAGCACATCATCTCGTTGTGCCGCAACA
TTGCCGGCCAGGAACATGATGCCGCCGAGTACATATCCCGCATCTACTAC
ATCTATTCCATGTACCTGGTGAACACAGGCCAGCGAACCTCGGCCATCAA
TTTCCTACAAATTGCCATGGATCTGGTGCGTGGTCACGTGTGGACCGCCG
AGGTGGGAATGCCCGCAGGCAGTCTTACGCTCCACGAGCTGGTGGCCCAG
AATCTCGCCAGGCAGCTCCTCATCCAGGGCAAGTCCATTGTACGCCAGCA
TCCCGAGGATGCGGTGGCCATGGCCCGACGAGCCACTGTACTAATAGCCG
AAATTGGCAGGG

BO17094.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:12:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG31798-PA 1476 CG31798-RA 1..796 17..812 3980 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:11:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG31798-RB 1643 CG31798-RB 69..865 16..812 3985 100 Plus
CG31798-RA 1913 CG31798-RA 69..865 16..812 3985 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:11:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19394228..19395015 16..803 3940 100 Plus
Blast to na_te.dros performed on 2015-02-11 09:11:57 has no hits.

BO17094.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:02:20 Download gff for BO17094.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31798-PA 1..796 17..812 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:03:16 Download gff for BO17094.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 65..865 10..812 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:22:40 Download gff for BO17094.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 65..865 10..812 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:22:40 Download gff for BO17094.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19394224..19395020 10..810 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:03:16 Download gff for BO17094.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19394224..19395020 10..810 99   Plus

BO17094.complete Sequence

1507 bp assembled on 2006-10-11

GenBank Submission: FJ634023

> BO17094.complete
GAAGTTATCAGTCGACATGTCCTTGCAGTGGCAAAATGAGGTGGTGCGGA
TTACGCGCCAAGTGAAGCGCAATCTACCGCACCGAAATTTCCGAGAGATT
AACTTTGATCGCGAGACCATAAGGCAAGGAATCACCCCCCTGACCTACGA
TGAGGCGCGCCGTCTTAAGGGACCAGTTTTCGAGGCTCTGGAGGATGAGT
TGCGTCGAGCAGGATGCACCATGCTGCCGGAGTTTCTCCACTGCCTGGCC
ACCAAGGAGAATGCTCTTTTCGAGAGCCTAAATATCCGGGAACGTCTATC
CGATGACTCGGAATTGCTCTACGGAATGGTGGATCGACTCCGGGATGCCG
AACTGGCTGTTTGCCTGAACAAGCACCGGGGTCTCAAAAAGTGTTTTGGC
CTATTCTTCGAGACCATGCAGCTGCTGGAGCCGTATCGTCAGAAATACGC
ATACGCCCTGGTGGCCCTCAATGAGCACATCATCTCGTTGTGCCGCAACA
TTGCCGGCCAGGAACATGATGCCGCCGAGTACATATCCCGCATCTACTAC
ATCTATTCCATGTACCTGGTGAACACAGGCCAGCGAACCTCGGCCATCAA
TTTCCTACAAATTGCCATGGATCTGGTGCGTGGTCACGTGTGGACCGCCG
AGGTGGGAATGCCCGCAGGCAGTCTTACGCTCCACGAGCTGGTGGCCCAG
AATCTCGCCAGGCAGCTCCTCATCCAGGGCAAGTCCATTGTACGCCAGCA
TCCCGAGGATGCGGTGGCCATGGCCCGACGAGCCACTGTACTAATAGCCG
AAATTGGCAGGGATAAGAACATGGAGATTTTCTGTGACACTTTTCTGGAG
CGTGCCTACTTTCTAATGGAGATTGGTAACTTTAACTCGGCGCAGCAGTG
CCTTGAGCAGATCAAAACCCAGATCCTGGCCTGCACCGAATATCGATTCG
TTAAGCTCAACATTAAGTACTACCTGATCCAAGGGCAATGTTCCGAGATT
TTTGAGCACGTGGAGAAGGCCACTTCGTGTTACAAGAGAGCTCTTCGCTT
ATCCCGACTCTATACCCACCGCGATTTGGAGGCAGAGATACTTTTGCATC
TGGGAAAGATCTTTGCCAAGGACACACAGATGACAAGTATCGCTAAGAAA
TGCTATGAGCATGCCAAGCGCATCTACGTCGACTTTAACGATCTGCACAG
CCGCAAGATGGCCAACTATCTGCAGGCCAAGTTAATGGCGGATGAAATCA
CACCACTTTATATGGCCATGCTTAAGTCGTCTACCACTCGCTATTGCGCC
TTTTTCAACCTGCGTCAGTGGAAGAACCGCTGTCGTCCTTTTTGGAAGCG
ACTGGGTGACGAGATCATCAAACAGGAAACGGATAGCATATACTGTCTGC
TGGATGAGGAGAAGGAGGATCCTGGTCACGATGTGGCTCCCTATGACGAT
ATCGATCTCAAGACATTCAAACTGGCTGAGGGAGATATCGCAAGCTTTCT
AGACCAT

BO17094.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:47:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG31798-RB 1476 CG31798-PB 1..1473 17..1489 7365 100 Plus
CG31798-RA 1476 CG31798-PA 1..1473 17..1489 7365 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:47:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG31798-RB 1643 CG31798-RB 69..1542 16..1489 7370 100 Plus
CG31798-RA 1913 CG31798-RA 69..1542 16..1489 7370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:47:33
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19394228..19395015 16..803 3940 100 Plus
2L 23513712 2L 19395323..19395819 993..1489 2455 99.6 Plus
2L 23513712 2L 19395076..19395271 804..999 980 100 Plus
Blast to na_te.dros performed on 2014-11-27 23:47:34 has no hits.

BO17094.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:25:26 Download gff for BO17094.complete
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 1..1476 17..1493 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:45:45 Download gff for BO17094.complete
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 65..1548 10..1497 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:38:03 Download gff for BO17094.complete
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 70..1542 17..1491 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:25:26 Download gff for BO17094.complete
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 65..1548 10..1497 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:08:16 Download gff for BO17094.complete
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 70..1542 17..1491 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:08:16 Download gff for BO17094.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19394229..19395015 17..803 100 -> Plus
2L 19395076..19395271 804..999 100 -> Plus
2L 19395330..19395819 1000..1491 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:38:03 Download gff for BO17094.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19394229..19395015 17..803 100 -> Plus
arm_2L 19395076..19395271 804..999 100 -> Plus
arm_2L 19395330..19395819 1000..1491 99   Plus

BO17094.pep Sequence

Translation from 16 to 1507

> BO17094.pep
MSLQWQNEVVRITRQVKRNLPHRNFREINFDRETIRQGITPLTYDEARRL
KGPVFEALEDELRRAGCTMLPEFLHCLATKENALFESLNIRERLSDDSEL
LYGMVDRLRDAELAVCLNKHRGLKKCFGLFFETMQLLEPYRQKYAYALVA
LNEHIISLCRNIAGQEHDAAEYISRIYYIYSMYLVNTGQRTSAINFLQIA
MDLVRGHVWTAEVGMPAGSLTLHELVAQNLARQLLIQGKSIVRQHPEDAV
AMARRATVLIAEIGRDKNMEIFCDTFLERAYFLMEIGNFNSAQQCLEQIK
TQILACTEYRFVKLNIKYYLIQGQCSEIFEHVEKATSCYKRALRLSRLYT
HRDLEAEILLHLGKIFAKDTQMTSIAKKCYEHAKRIYVDFNDLHSRKMAN
YLQAKLMADEITPLYMAMLKSSTTRYCAFFNLRQWKNRCRPFWKRLGDEI
IKQETDSIYCLLDEEKEDPGHDVAPYDDIDLKTFKLAEGDIASFLDH

BO17094.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:01:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG31798-PB 491 CG31798-PB 1..491 1..491 2561 100 Plus
CG31798-PA 491 CG31798-PA 1..491 1..491 2561 100 Plus