Clone BO17150 Report

Search the DGRC for BO17150

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:171
Well:50
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO17150.pep: Imported from assembly
Sequenced Size:2503

Clone Sequence Records

BO17150.complete Sequence

2503 bp assembled on 2008-11-10

> BO17150.complete
GAAGTTATCAGTCGACATGCGGCACACCGGAAGTAGGGCGGAAATCGATA
TGCTGGAACGCGAGACAAGCAGTCAGATCAGGAACTTGGATGTCTCGGCC
GGGGATTTGCTGAGTCGCACCCACGAGGAGCTGGTCCTTTTGCTGATTCA
GTTGAGGAGACAGAGTAGCCAGACTGCCAGGGCCATCGAGCAGTGCTGCA
GCGATATCCATGATGTGCAGAATCGCCTGCGAAGTGCCGAGGGTTTGACC
AGAGCCGAGAGTATCCAGCGTTTGGACTACTTGAAGCAGCACCTTTTGGA
CCTGGAGCGGCACTACGAGAAGAGCAAGCCGCTGGTCAATTTGGTGGACA
ACATGGTCAAGTTGGGCTCACTGTATCGCAACGATGCAAACGGCAGGGTC
CAACCAGCCACACTGGATCGCCTGGAGTTCAATCAGCGGATGCAGGAGCA
GCAAATGCTGCAAGAGGAGCAGCAGCAGTGGGAGCGTCTCAGTCCCAATC
AGGCAGAGTTGCAGGCCAAGGTGCGTGAGCTCTACCAACTGGATCAGCTG
CTGCAGGAGGAGTCGGGCACTTTGCAGAGTTTGCAGCGGGACAAGGAAGA
TCTCGAGCGAGCCTTGGGAGGATTGAGGGCTCGCATCCACGACAGCAATG
CCACGCCCATGGCCCTGGAGGCGGCCAAGAAGCAGCAGCACATCCTGGAG
CGTGAGCTGTCGCGGGTTCATCAGCTTCTGGCCGAGAACTCTAAGAAACT
GGAGCAGACAGTGGCGGGAAATGCTCGCCTGGAGCAGGAGTTACTCCTTC
TCCGTCAGAAGGTACAAGCCGTTCGAGGATCCACCACCAATGGAATGAAC
GGTGATGGCTCTCACATCAATGGTGACCAAACTGCCGCCGTTTTGGCCTC
GGAATTGGAGCGAGTGCAGTCCCTGGTGGGCGATATGCAAAGACAACGCC
ACGAACTCAGCTCCGCAGTTCGCCAGCTGACGGAGAACTCGACCAGGTTG
TACCAGGAGATTGGTAACAAGGAGATGAACGGCGGTGGCTCCACCAATGG
CAGTCTGAAGAAGCGAAGCAACTCAACTAGTTGGACGGAAACCGATTTGG
ATGCTAATATGCTGCGATGCGGATCCCGCCAGCAGTTGAATGATTCCACT
TTGAACCTATCCACTCCCCTCTATGTGGACACCAATAGTTCGACCAAACT
GAGTGACTACAATCGATACAATGGCAGTAGCGATGCCATCGAGATGAGTG
GAGTGGACAGTGATGGTTTCCTGGACAGCAATCCATTCGCGCTGGGCTTG
GAGAAGCAGGAGATTAAGACAGTGAGGATTGTCAAGCGAGAGTCTGAACG
TCGGAATCGCGATCGCAGTGAAAGGGGTCTAAGCAACTCCATTCAGAATC
TGGATCAGGTCCTGGAGGAGGAGCAATATGCCCAACAGCAGAGGGAACAG
CAGCTGTACGCTCAAAACTTGGAAGAACCGATGACCAACGGGCACCACAG
TCGATCCAAGTCATTGCCCCGAAACTACAGTGAGCCCCCGAAACAACGAC
ACAGTCGTCATCTGAATGGTGGCAAGCAGAATGGTCACCACTATAATGGT
GGCTACGATTACGATCGGAACAGCAACTACGAGCATCAGCCGCCACCACC
ACCGGCACCACAGAGCAATGGTCATCACCACAATCATCAGCAAAGGGAGC
AGCGGGAGCACCTTAATCCACTGGCCAATGCCTATTTCGCCAAGCAGCTC
CAGCAGCAGGCGAATCCCTCGAGGGACAGTGCCCGCGTGGCCTTGCGGAC
CAAGACCGATTCCCTGCAGAGCCTCAACAAAAGCCTTACGGACATCAGTC
CGGAGCCAGTGTTCCAGAGCGTTGCTGCCCGCCAGATCATCAACGAAATG
TCCGCCGGTTCGGCATCGGAGGACACCGAGAAGGTGGTGGAGAAGGTGCC
ACCGCACCACAAGCATCGCAGAGCGGTTCCAAGGGAGAAGAGGCGACACT
ACACTGCGCCAAACAATGTCAATCAGAAAGCCATGGAAAAGGTGCAGGCC
GAAAACGATATGAATCGAAATAACACCAACTGGAGAGCTCGCGATGATTT
GGATATGGAGGTGGCCCTGCGACCGCGAATGAATGCTCCTGATGTCGTTC
GTTCTGCTTTGGGACAGGGCGAAAAGATATCCGAGAACACCATAGACAAT
TTGCTGCTGGCACCGAACAAAATAGTCATACCCGAGCGTTACATACCTGA
AACAACGCCCGAGCTGTCGCCGGAGGAAAAGAAGCGTCGTCAGGAGAAGG
TCGAGTCCATCAAGAAAATGCTGGCTGAGGCGCCCATTAGCAGCAATGAA
AACGAAAGCCTGCCCCCGAGCAAAATCAACGCCGAGAAGAAGCAGCGCGA
GCACCTGCTGCAACTCAACCAAATCCTGGCCCAACAGGTGATGCAAGTCA
GCAAGATCGTGGCCGGAAATCCCACTAGTCACAACGCAAGCTTTCTAGAC
CAT

BO17150.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:45:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG34383-RK 6063 CG34383-PK 3592..6060 17..2485 12345 100 Plus
CG34383-RG 6129 CG34383-PG 3658..6126 17..2485 12345 100 Plus
CG34383-RF 6063 CG34383-PF 3592..6060 17..2485 12345 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:45:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG34383-RK 9215 CG34383-RK 4330..6798 17..2485 12345 100 Plus
CG34383-RJ 10048 CG34383-RJ 5163..7631 17..2485 12345 100 Plus
CG34383-RG 6710 CG34383-RG 3931..6399 17..2485 12345 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:45:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13758456..13759783 744..2071 6640 100 Plus
3R 32079331 3R 13757180..13757477 218..515 1490 100 Plus
3R 32079331 3R 13757551..13757783 513..745 1165 100 Plus
3R 32079331 3R 13759844..13760026 2072..2254 915 100 Plus
3R 32079331 3R 13756889..13757027 82..220 695 100 Plus
3R 32079331 3R 13760245..13760363 2348..2466 595 100 Plus
3R 32079331 3R 13760087..13760180 2255..2348 470 100 Plus
3R 32079331 3R 13756597..13756662 17..82 330 100 Plus
Blast to na_te.dros performed 2014-11-26 14:45:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 599..688 523..432 139 65.6 Minus
roo 9092 roo DM_ROO 9092bp 1062..1164 447..549 128 62.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6742..6840 378..477 119 60.4 Plus

BO17150.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:17:22 Download gff for BO17150.complete
Subject Subject Range Query Range Percent Splice Strand
CG34383-RF 4233..6716 9..2494 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:06 Download gff for BO17150.complete
Subject Subject Range Query Range Percent Splice Strand
CG34383-RG 3993..6461 17..2487 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:27:12 Download gff for BO17150.complete
Subject Subject Range Query Range Percent Splice Strand
CG34383-RF 4242..6710 17..2487 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:46 Download gff for BO17150.complete
Subject Subject Range Query Range Percent Splice Strand
CG34383-RG 3931..6399 17..2487 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:46 Download gff for BO17150.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13756597..13756662 17..82 100 -> Plus
3R 13756890..13757027 83..220 100 -> Plus
3R 13757183..13757476 221..514 100 -> Plus
3R 13757553..13757783 515..745 100 -> Plus
3R 13758458..13759783 746..2071 100 -> Plus
3R 13759844..13760026 2072..2254 100 -> Plus
3R 13760087..13760179 2255..2347 100 -> Plus
3R 13760245..13760362 2348..2465 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:06 Download gff for BO17150.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9582319..9582384 17..82 100 -> Plus
arm_3R 9582612..9582749 83..220 100 -> Plus
arm_3R 9582905..9583198 221..514 100 -> Plus
arm_3R 9583275..9583505 515..745 100 -> Plus
arm_3R 9584180..9585505 746..2071 100 -> Plus
arm_3R 9585566..9585748 2072..2254 100 -> Plus
arm_3R 9585809..9585901 2255..2347 100 -> Plus
arm_3R 9585967..9586084 2348..2465 100 -> Plus

BO17150.3prime Sequence

654 bp (605 high quality bases) assembled on 2006-10-13

> BO17150.3prime
ATGGTCTAGAAAGCTTGCGTTGTGACTAGTGGGATTTCCGGCCACGATCT
TGCTGACTTGCATCACCTGTTGGGCCAGGATTTGGTTGAGTTGCAGCAGG
TGCTCGCGCTGCTTCTTCTCGGCGTTGATTTTGCTCGGGGGCAGGCTTTC
GTTTTCATTGCTGCTAATGGGCGCCTCAGCCAGCATTTTCTTGATGGACT
CGACCTTCTCCTGACGACGCTTCTTTTCCTCCGGCGACAGCTCGGGCGTT
GTTTCAGGTATGTAACGCTCGGGTATGACTATTTTGTTCGGTGCCAGCAG
CAAATTGTCTATGGTGTTCTCGGATATCTTTTCGCCCTGTCCCAAAGCAG
AACGAACGACATCAGGAGCATTCATTCGCGGTCGCAGGGCCACCTCCATA
TCCAAATCATCGCGAGCTCTCCAGTTGGTGTTATTTCGATTCATATCGTT
TTCGGCCTGCACCTTTTCCATGGCTTTCTGATTGACATTGTTTGGCGCAG
TGTAGTGTCGCCTCTTCTCCCTTGGAACCGCTCTGCGATGCTTGTGGTGC
GGTGGCACCTTCTCCACCACCTTCTCGGTGTCCTCCGATGCCGAACCGGC
GGACATTTCGTTGGAGATCTGGCGGGCAGCAACGCTCTGGGACACTGGCT
CCGG

BO17150.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 17:11:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG9322-PA 2472 CG9322-RA 1834..2469 654..19 3105 99.5 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:51:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG34383-RK 9215 CG34383-RK 6163..6798 654..19 3135 99.5 Minus
CG34383-RJ 10048 CG34383-RJ 6996..7631 654..19 3135 99.5 Minus
CG34383-RH 9067 CG34383-RH 6025..6660 654..19 3135 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:51:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13759562..13759783 654..433 1065 98.6 Minus
3R 32079331 3R 13759844..13760026 432..250 915 100 Minus
3R 32079331 3R 13760245..13760363 156..38 595 100 Minus
3R 32079331 3R 13760087..13760180 249..156 470 100 Minus
Blast to na_te.dros performed on 2015-02-13 15:51:52 has no hits.

BO17150.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:03:23 Download gff for BO17150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9322-PA 1834..2472 15..654 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 12:34:59 Download gff for BO17150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG34383-RH 6025..6666 10..654 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:23:15 Download gff for BO17150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG34383-RH 6025..6666 10..654 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:23:15 Download gff for BO17150.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 13759562..13759783 433..654 98 -> Minus
3R 13759844..13760026 250..432 100 -> Minus
3R 13760087..13760179 157..249 100 -> Minus
3R 13760245..13760362 39..156 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 12:34:59 Download gff for BO17150.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9585284..9585505 433..654 98 -> Minus
arm_3R 9585566..9585748 250..432 100 -> Minus
arm_3R 9585809..9585901 157..249 100 -> Minus
arm_3R 9585967..9586084 39..156 100 -> Minus

BO17150.5prime Sequence

617 bp (560 high quality bases) assembled on 2006-10-13

> BO17150.5prime
GAAGTTATCAGTCGACATGCGGCACACCGGAAGTAGGGCGGAAATCGATA
TGCTGGAACGCGAGACAAGCAGTCAGATCAGGAACTTGGATGTCTCGGCC
GGGGATTTGCTGAGTCGCACCCACGAGGAGCTGGTCCTTTTGCTGATTCA
GTTGAGGAGACAGAGTAGCCAGACTGCCAGGGCCATCGAGCAGTGCTGCA
GCGATATCCATGATGTGCAGAATCGCCTGCGAAGTGCCGAGGGTTTGACC
AGAGCCGAGAGTATCCAGCGTTTGGACTACTTGAAGCAGCACCTTTTGGA
CCTGGAGCGGCACTACGAGAAGAGCAAGCCGCTGGTCAATTTGGTGGACA
ACATGGTCAAGTTGGGCTCACTGTATCGCAACGATGCAAACGGCAGGGTC
CAACCAGCCACACTGGATCGCCTGGAGTTCAATCAGCGGATGCAGGAGCA
GCAAATGCTGCAAGAGGAGCAGCAGCAGTGGGAGCGTCTCAGTCCCAATC
AGGCAGAGTTGCAGGCCAAGGTGCGTGAGCTCTACCACCTGGATCAGCTG
CTGCAGGAGGAGTCGGGCACTTTGCAGAGTTTGCAGCGGGACAAGGAAGA
TCTCGAGCGAGCCTTGG

BO17150.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 17:11:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG9322-PA 2472 CG9322-RA 1..601 17..617 2980 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:52:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG34383-RL 6840 CG34383-RL 3993..4593 17..617 2990 99.8 Plus
CG34383-RK 9215 CG34383-RK 4330..4930 17..617 2990 99.8 Plus
CG34383-RJ 10048 CG34383-RJ 5163..5763 17..617 2990 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:52:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13757180..13757477 218..515 1490 100 Plus
3R 32079331 3R 13756889..13757027 82..220 695 100 Plus
3R 32079331 3R 13757551..13757655 513..617 510 99 Plus
3R 32079331 3R 13756597..13756662 17..82 330 100 Plus
Blast to na_te.dros performed 2015-02-13 15:52:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 599..688 523..432 139 65.6 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6742..6840 378..477 119 60.4 Plus
roo 9092 roo DM_ROO 9092bp 1062..1164 447..549 119 61.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2311..2364 432..485 108 66.7 Plus

BO17150.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:03:23 Download gff for BO17150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9322-PA 1..601 17..617 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 12:35:05 Download gff for BO17150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34383-RJ 5154..5763 9..617 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:24:30 Download gff for BO17150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34383-RJ 5154..5763 9..617 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:24:30 Download gff for BO17150.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 13756588..13756662 9..82 94 -> Plus
3R 13756890..13757027 83..220 100 -> Plus
3R 13757183..13757476 221..514 100 -> Plus
3R 13757553..13757655 515..617 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 12:35:05 Download gff for BO17150.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9582310..9582384 9..82 94 -> Plus
arm_3R 9582612..9582749 83..220 100 -> Plus
arm_3R 9582905..9583198 221..514 100 -> Plus
arm_3R 9583275..9583377 515..617 99   Plus

BO17150.pep Sequence

Translation from 16 to 2503

> BO17150.pep
MRHTGSRAEIDMLERETSSQIRNLDVSAGDLLSRTHEELVLLLIQLRRQS
SQTARAIEQCCSDIHDVQNRLRSAEGLTRAESIQRLDYLKQHLLDLERHY
EKSKPLVNLVDNMVKLGSLYRNDANGRVQPATLDRLEFNQRMQEQQMLQE
EQQQWERLSPNQAELQAKVRELYQLDQLLQEESGTLQSLQRDKEDLERAL
GGLRARIHDSNATPMALEAAKKQQHILERELSRVHQLLAENSKKLEQTVA
GNARLEQELLLLRQKVQAVRGSTTNGMNGDGSHINGDQTAAVLASELERV
QSLVGDMQRQRHELSSAVRQLTENSTRLYQEIGNKEMNGGGSTNGSLKKR
SNSTSWTETDLDANMLRCGSRQQLNDSTLNLSTPLYVDTNSSTKLSDYNR
YNGSSDAIEMSGVDSDGFLDSNPFALGLEKQEIKTVRIVKRESERRNRDR
SERGLSNSIQNLDQVLEEEQYAQQQREQQLYAQNLEEPMTNGHHSRSKSL
PRNYSEPPKQRHSRHLNGGKQNGHHYNGGYDYDRNSNYEHQPPPPPAPQS
NGHHHNHQQREQREHLNPLANAYFAKQLQQQANPSRDSARVALRTKTDSL
QSLNKSLTDISPEPVFQSVAARQIINEMSAGSASEDTEKVVEKVPPHHKH
RRAVPREKRRHYTAPNNVNQKAMEKVQAENDMNRNNTNWRARDDLDMEVA
LRPRMNAPDVVRSALGQGEKISENTIDNLLLAPNKIVIPERYIPETTPEL
SPEEKKRRQEKVESIKKMLAEAPISSNENESLPPSKINAEKKQREHLLQL
NQILAQQVMQVSKIVAGNPTSHNASFLDH

BO17150.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:07:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG34383-PK 2020 CG34383-PK 1198..2020 1..823 4199 100 Plus
CG34383-PG 2042 CG34383-PG 1220..2042 1..823 4199 100 Plus
CG34383-PF 2020 CG34383-PF 1198..2020 1..823 4199 100 Plus
CG34383-PD 2020 CG34383-PD 1198..2020 1..823 4199 100 Plus
CG34383-PE 2050 CG34383-PE 1198..2021 1..824 4158 99.3 Plus