Clone BO17467 Report

Search the DGRC for BO17467

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:174
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG14694-RA
Protein status:BO17467.pep: validated full length
Sequenced Size:1372

Clone Sequence Records

BO17467.3prime Sequence

813 bp (780 high quality bases) assembled on 2006-10-13

> BO17467.3prime
ATGGTCTAGAAAGCTTGCATTCGCCTCCTGAATTGCTTTTGGTTTCTTCG
AAATTGACCATATATATTGCAATATAACAGCAATAGAATAGACTATTCCA
ATAACTATAAAATAGAATGCGTAGACGGAAAACTGTTGAAAAACATTCAA
ATTCAGATTGGCCTTTTCCGAGACGACGACAAATGTGAGGATGCACTGCA
GGAGGAGTCCCACGAACGTGTTGAAACCAAACACCAGAGCGAAGCTATCC
TCCTCCAAGCTGCTGGCCAACTCCGAGCTGGCCACTGTTATGGTGAAGGC
AAACAGGCCTCCATACAGCACATAGCCAAGATAGGACAGATATATATCAT
CGGTCCAGCAGGAAAGCAAAACACAACCTCCTTCCAGGACCGACAGCAGA
GCCATCGAGAGCAGGCTGCTCCTGGTGTTCAGACGTCCAGCATGGAAATA
ACCGGCGAGAAGGGCGAACACAGCGCTTAGAAGCGTCAGGGCCACGTCCA
CAGCTCCATTCCAGGCTATTGTTGGTTCGTTCTCGAAGGACTTCCATACC
ACCTGCATATAGGTGGTGATTTGCAGAAATCCAGCCAAACTGATGGCATA
CCACAAGCTCCATTGTATCACCAAGGGATTAGTGTAGGCACTACGGAAGT
GGGACCAAAGGAGCTGCAACGCTGGTATCTTCTTTTCTTGGCTCGCTTCC
TCGTTACTGGGTTGCTCTGAACCCTTCTCCAGGTTACCACCATCCGATTT
GGTTCCACCTTCTATGGCCTCGCTTCGATTGTGAAAGTACAAACTCTTCT
CCACCTTTGGCAA

BO17467.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:15:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG14694-PA 1341 CG14694-RA 544..1338 813..19 3975 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:08:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG14694-RA 1369 CG14694-RA 554..1348 813..19 3975 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:08:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10858840..10859133 520..813 1470 100 Plus
3R 32079331 3R 10858223..10858483 19..279 1305 100 Plus
3R 32079331 3R 10858544..10858785 278..519 1210 100 Plus
Blast to na_te.dros performed on 2015-01-30 18:08:05 has no hits.

BO17467.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:07:58 Download gff for BO17467.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14694-PA 546..1341 15..811 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:54:24 Download gff for BO17467.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 556..1351 15..811 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:08:39 Download gff for BO17467.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 556..1351 15..811 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:08:39 Download gff for BO17467.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 10858220..10858481 15..277 99 <- Plus
3R 10858544..10858785 278..519 100 <- Plus
3R 10858840..10859131 520..811 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:54:24 Download gff for BO17467.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6683942..6684203 15..277 99 <- Plus
arm_3R 6684266..6684507 278..519 100 <- Plus
arm_3R 6684562..6684853 520..811 100   Plus

BO17467.5prime Sequence

857 bp (838 high quality bases) assembled on 2006-10-13

> BO17467.5prime
GAAGTTATCAGTCGACATGGAGTCGTGGCTGAAGATATCGTGCCTGCTAT
GCATATTCGGGTTTCTCCGGGAACTTCGACCCTCGGAGCCATACCACGCG
GAAATCCTGATGGGCGAGTGGTATCACGTCACCCAGGACGAGGTCAACCG
ATCCGTTTACCCGGTGGGCACATACTCCTACCTGGCGCTCCTAATCTTCG
TCTTCCTCATTACGGACCTGCTCAGATACAAGCCCGTGATCATCGCCAAT
GCCACTACAGGCATCTGCATCTGGGGCACACTGATTTGGACGACCACTTT
GAGCGGCCTGCAGGCGGTGGAGGTTTTCTATGGCTTCTACCAGGCGGGCG
AGGTGGCCTACTACTCGTACATCTACGCCAAGGTGGACAAACAGTACTAT
CCCAGGGTGACCTCGCACACCAGGGCAGCCATGTTCGTGGGCAAGCTAGT
TGCGGGAATCCTGGCTCAGATGGTCATTGGAATGAGGTGGATGAACTACA
AGCAACTGTTTTACATCACCGTCACCTCTCAAGTTGCTGCGCTGCTCTGG
GCATTCTTTTTGCCAAAGGTGGAGAAGAGTTTGTACTTTCACAATCGAAG
CGAGGCCATAGAAGGTGGAACCAAATCGGATGGTGGTAACCTGGAGAAGG
GTTCAGAGCAACCCAGTAACGAGGAAGCGAGCCAAGAAAAGAAGATACCA
GCGTTGCAGCTCCTTTGGTCCCACTTCCGTAGTGCCTACACTAATCCCTT
GGTGATACAATGGAGCTTGTGGTATGCCATCAGTTTGGCTGGATTTCTGC
AAATCACCACCTATATGCAGGTGGTATGGAAGTCCTTCGAGAACGAACCA
CAATAGC

BO17467.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:15:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG14694-PA 1341 CG14694-RA 1..834 17..850 4170 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:32:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG14694-RA 1369 CG14694-RA 11..852 17..857 4185 99.9 Plus
CG6574-RA 1962 CG6574-RA 709..810 350..451 255 83.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:32:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10858843..10859165 850..528 1615 100 Minus
3R 32079331 3R 10859229..10859533 527..223 1525 100 Minus
3R 32079331 3R 10859595..10859803 225..17 1045 100 Minus
3R 32079331 3R 10861801..10861902 451..350 255 83.3 Minus
Blast to na_te.dros performed on 2015-02-10 17:32:37 has no hits.

BO17467.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:07:59 Download gff for BO17467.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14694-PA 1..842 17..857 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:26:41 Download gff for BO17467.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 7..852 13..857 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:10:04 Download gff for BO17467.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 7..852 13..857 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:10:04 Download gff for BO17467.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10858834..10859165 528..857 98 <- Minus
3R 10859229..10859530 226..527 100 <- Minus
3R 10859595..10859807 13..225 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:26:41 Download gff for BO17467.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6685317..6685529 13..225 99   Minus
arm_3R 6684556..6684887 528..857 98 <- Minus
arm_3R 6684951..6685252 226..527 100 <- Minus

BO17467.complete Sequence

1372 bp assembled on 2006-10-11

GenBank Submission: FJ634136

> BO17467.complete
GAAGTTATCAGTCGACATGGAGTCGTGGCTGAAGATATCGTGCCTGCTAT
GCATATTCGGGTTTCTCCGGGAACTTCGACCCTCGGAGCCATACCACGCG
GAAATCCTGATGGGCGAGTGGTATCACGTCACCCAGGACGAGGTCAACCG
ATCCGTTTACCCGGTGGGCACATACTCCTACCTGGCGCTCCTAATCTTCG
TCTTCCTCATTACGGACCTGCTCAGATACAAGCCCGTGATCATCGCCAAT
GCCACTACAGGCATCTGCATCTGGGGCACACTGATTTGGACGACCACTTT
GAGCGGCCTGCAGGCGGTGGAGGTTTTCTATGGCTTCTACCAGGCGGGCG
AGGTGGCCTACTACTCGTACATCTACGCCAAGGTGGACAAACAGTACTAT
CCCAGGGTGACCTCGCACACCAGGGCAGCCATGTTCGTGGGCAAGCTAGT
TGCGGGAATCCTGGCTCAGATGGTCATTGGAATGAGGTGGATGAACTACA
AGCAACTGTTTTACATCACCGTCACCTCTCAAGTTGCTGCGCTGCTCTGG
GCATTCTTTTTGCCAAAGGTGGAGAAGAGTTTGTACTTTCACAATCGAAG
CGAGGCCATAGAAGGTGGAACCAAATCGGATGGTGGTAACCTGGAGAAGG
GTTCAGAGCAACCCAGTAACGAGGAAGCGAGCCAAGAAAAGAAGATACCA
GCGTTGCAGCTCCTTTGGTCCCACTTCCGTAGTGCCTACACTAATCCCTT
GGTGATACAATGGAGCTTGTGGTATGCCATCAGTTTGGCTGGATTTCTGC
AAATCACCACCTATATGCAGGTGGTATGGAAGTCCTTCGAGAACGAACCA
ACAATAGCCTGGAATGGAGCTGTGGACGTGGCCCTGACGCTTCTAAGCGC
TGTGTTCGCCCTTCTCGCCGGTTATTTCCATGCTGGACGTCTGAACACCA
GGAGCAGCCTGCTCTCGATGGCTCTGCTGTCGGTCCTGGAAGGAGGTTGT
GTTTTGCTTTCCTGCTGGACCGATGATATATATCTGTCCTATCTTGGCTA
TGTGCTGTATGGAGGCCTGTTTGCCTTCACCATAACAGTGGCCAGCTCGG
AGTTGGCCAGCAGCTTGGAGGAGGATAGCTTCGCTCTGGTGTTTGGTTTC
AACACGTTCGTGGGACTCCTCCTGCAGTGCATCCTCACATTTGTCGTCGT
CTCGGAAAAGGCCAATCTGAATTTGAATGTTTTTCAACAGTTTTCCGTCT
ACGCATTCTATTTTATAGTTATTGGAATAGTCTATTCTATTGCTGTTATA
TTGCAATATATATGGTCAATTTCGAAGAAACCAAAAGCAATTCAGGAGGC
GAATGCAAGCTTTCTAGACCAT

BO17467.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:01:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG14694-RA 1341 CG14694-PA 1..1338 17..1354 6690 100 Plus
CG6574-RA 1335 CG6574-PA 334..435 350..451 255 83.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:01:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG14694-RA 1369 CG14694-RA 11..1348 17..1354 6690 100 Plus
CG6574-RA 1962 CG6574-RA 709..810 350..451 255 83.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:00:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10858840..10859165 853..528 1630 100 Minus
3R 32079331 3R 10859229..10859533 527..223 1525 100 Minus
3R 32079331 3R 10858223..10858483 1354..1094 1305 100 Minus
3R 32079331 3R 10858544..10858785 1095..854 1210 100 Minus
3R 32079331 3R 10859595..10859803 225..17 1045 100 Minus
3R 32079331 3R 10861801..10861902 451..350 255 83.3 Minus
Blast to na_te.dros performed on 2014-11-28 01:01:00 has no hits.

BO17467.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:23:38 Download gff for BO17467.complete
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 1..1341 17..1358 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:43:33 Download gff for BO17467.complete
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 7..1351 13..1358 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:04:38 Download gff for BO17467.complete
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 11..1348 17..1356 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:23:39 Download gff for BO17467.complete
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 7..1351 13..1358 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:31:04 Download gff for BO17467.complete
Subject Subject Range Query Range Percent Splice Strand
CG14694-RA 11..1348 17..1356 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:31:04 Download gff for BO17467.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10858221..10858481 1096..1356 99 <- Minus
3R 10858544..10858785 854..1095 100 <- Minus
3R 10858840..10859165 528..853 100 <- Minus
3R 10859229..10859530 226..527 100 <- Minus
3R 10859595..10859803 17..225 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:04:38 Download gff for BO17467.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6683943..6684203 1096..1356 99 <- Minus
arm_3R 6684266..6684507 854..1095 100 <- Minus
arm_3R 6684562..6684887 528..853 100 <- Minus
arm_3R 6684951..6685252 226..527 100 <- Minus
arm_3R 6685317..6685525 17..225 100   Minus

BO17467.pep Sequence

Translation from 16 to 1372

> BO17467.pep
MESWLKISCLLCIFGFLRELRPSEPYHAEILMGEWYHVTQDEVNRSVYPV
GTYSYLALLIFVFLITDLLRYKPVIIANATTGICIWGTLIWTTTLSGLQA
VEVFYGFYQAGEVAYYSYIYAKVDKQYYPRVTSHTRAAMFVGKLVAGILA
QMVIGMRWMNYKQLFYITVTSQVAALLWAFFLPKVEKSLYFHNRSEAIEG
GTKSDGGNLEKGSEQPSNEEASQEKKIPALQLLWSHFRSAYTNPLVIQWS
LWYAISLAGFLQITTYMQVVWKSFENEPTIAWNGAVDVALTLLSAVFALL
AGYFHAGRLNTRSSLLSMALLSVLEGGCVLLSCWTDDIYLSYLGYVLYGG
LFAFTITVASSELASSLEEDSFALVFGFNTFVGLLLQCILTFVVVSEKAN
LNLNVFQQFSVYAFYFIVIGIVYSIAVILQYIWSISKKPKAIQEANASFL
DH

BO17467.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG14694-PA 446 CG14694-PA 1..446 1..446 2308 100 Plus
CG6574-PA 444 CG6574-PA 1..429 1..432 1354 58.3 Plus
CG17036-PB 432 CG17036-PB 1..416 1..429 915 44.1 Plus
CG17036-PA 432 CG17036-PA 1..416 1..429 915 44.1 Plus