Clone BO17551 Report

Search the DGRC for BO17551

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:175
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG15255-RA
Protein status:BO17551.pep: validated full length
Sequenced Size:817

Clone Sequence Records

BO17551.3prime Sequence

722 bp (560 high quality bases) assembled on 2006-10-13

> BO17551.3prime
ATGGTCTAGAAAGCTTGCCAGCAAAATGGGGCACTTGTACATAATGTTGA
TCTTATCGATGTCCTTGGAGCTAAGACCCACTCGCTGTCCAATTACCGCA
CTGGAATCTAGGGGAACTATAGTATCCTCGCCGTTGATAGAGAAGGCTCC
TGGTCGATAATGAAGACAGCTATCGTAGTCGTAACCAACTTCGAAATCGG
TCACGACTGTGTCGGCATACTTTTGGAAATTGAATTCCTTGCCCGGCACT
ATGTTTTCGTAGATCACGTTTATAAAATCATCTCGAATGGACGAGCTCTG
TTGGTGATAGAATCCCAAGGCGTGCATAAACTCATGCAGGATCGTTCCGG
GCCGGAAACAGCCTTCGCCGAGCGGGTATATTTCCAGATTCATTTCCTGC
GGGGCACCTTGGTAGCCGACGGCAGTGTAGCATCCTCCAGACTTGGCCGT
AACCGTCAAATAGGCCTTATCCTCATCGGTGGCTTCCCTAAACCTCAAAC
AAGTGTGCAGCTCCAAGGTATCGATGCCAGTTTGGATGGCCTTCTTGTGC
GCCGTGTCAAAGTCATCTGATATCCTGTAGACCACCACATTTCCAGGCCA
TCTCTTTTCCGTGTTGATAAGGCCATTGCGAGCCTTGGGAGCACCCTGCT
CCAGATTTCTTTGTTGCTCCTCCGTTAGCATCATATCACCCTCGACAAAT
CCACCTGCCTCCTCCGGATCGA

BO17551.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:16:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG15255-PA 786 CG15255-RA 81..783 721..19 3515 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:38:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG15255-RB 1549 CG15255-RB 115..817 721..19 3515 100 Minus
CG15255-RA 988 CG15255-RA 115..817 721..19 3515 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:38:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15610903..15611605 19..721 3515 100 Plus
Blast to na_te.dros performed on 2015-02-10 17:38:21 has no hits.

BO17551.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:09:40 Download gff for BO17551.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15255-PA 81..786 16..721 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:27:10 Download gff for BO17551.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15255-RA 115..817 19..721 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:10:24 Download gff for BO17551.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15255-RA 115..817 19..721 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:10:24 Download gff for BO17551.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 15610903..15611605 19..721 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:27:10 Download gff for BO17551.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15610903..15611605 19..721 100   Plus

BO17551.5prime Sequence

765 bp (665 high quality bases) assembled on 2006-10-13

> BO17551.5prime
GAAGTTATCAGTCGACATGTCGAGGTCTGGAATAATATATGTTCTTCTGC
TGCAAGTGGTGCTTAACTCTGGCAAACCCCTGCCAGCAGGTGTCTACGAT
CCGGAGGAGGCAGGTGGATTTGTCGAGGGTGATATGATGCTAACGGAGGA
GCAACAAAGAAATCTGGAGCAGGGTGCTCCCAAGGCTCGCAATGGCCTTA
TCAACACGGAAAAGAGATGGCCTGGAAATGTGGTGGTCTACAGGATATCA
GATGACTTTGACACGGCGCACAAGAAGGCCATCCAAACTGGCATCGATAC
CTTGGAGCTGCACACTTGTTTGAGGTTTAGGGAAGCCACCGATGAGGATA
AGGCCTATTTGACGGTTACGGCCAAGTCTGGAGGATGCTACACTGCCGTC
GGCTACCAAGGTGCCCCGCAGGAAATGAATCTGGAAATATACCCGCTCGG
CGAAGGCTGTTTCCGGCCCGGAACGATCCTGCATGAGTTTATGCACGCCT
TGGGATTCTATCACCAACAGAGCTCGTCCATTCGAGATGATTTTATAAAC
GTGATCTACGAAAACATAGTGCCGGGCAAGGAATTCAATTTCCAAAAGTA
TGCCGACACAGTCGTGACCGATTTCGAAGTTGGTTACGACTACGATAGCT
GTCTTCATTATCGACCAGGAGCCTTCTCTATCAACGGCGAGGATACTATA
GTTCCCCTAGATTCCAGTGCGGTAATTGGACAGCGAGTGGGTCTTACCTC
AAGGACATCGATAAG

BO17551.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:16:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG15255-PA 786 CG15255-RA 1..730 17..746 3650 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:10:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG15255-RB 1549 CG15255-RB 35..784 17..765 3710 99.7 Plus
CG15255-RA 988 CG15255-RA 35..784 17..765 3710 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:10:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15610936..15611685 765..17 3685 99.7 Minus
Blast to na_te.dros performed on 2015-02-10 18:10:19 has no hits.

BO17551.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:09:40 Download gff for BO17551.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15255-PA 1..750 17..765 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:45:15 Download gff for BO17551.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15255-RA 35..784 17..765 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:28:58 Download gff for BO17551.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15255-RA 35..784 17..765 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:28:58 Download gff for BO17551.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 15610936..15611685 17..765 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:45:15 Download gff for BO17551.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15610936..15611685 17..765 99   Minus

BO17551.complete Sequence

817 bp assembled on 2006-10-11

GenBank Submission: FJ634170

> BO17551.complete
GAAGTTATCAGTCGACATGTCGAGGTCTGGAATAATATATGTTCTTCTGC
TGCAAGTGGTGCTTAACTCTGGCAAACCCCTGCCAGCAGGTGTCTACGAT
CCGGAGGAGGCAGGTGGATTTGTCGAGGGTGATATGATGCTAACGGAGGA
GCAACAAAGAAATCTGGAGCAGGGTGCTCCCAAGGCTCGCAATGGCCTTA
TCAACACGGAAAAGAGATGGCCTGGAAATGTGGTGGTCTACAGGATATCA
GATGACTTTGACACGGCGCACAAGAAGGCCATCCAAACTGGCATCGATAC
CTTGGAGCTGCACACTTGTTTGAGGTTTAGGGAAGCCACCGATGAGGATA
AGGCCTATTTGACGGTTACGGCCAAGTCTGGAGGATGCTACACTGCCGTC
GGCTACCAAGGTGCCCCGCAGGAAATGAATCTGGAAATATACCCGCTCGG
CGAAGGCTGTTTCCGGCCCGGAACGATCCTGCATGAGTTTATGCACGCCT
TGGGATTCTATCACCAACAGAGCTCGTCCATTCGAGATGATTTTATAAAC
GTGATCTACGAAAACATAGTGCCGGGCAAGGAATTCAATTTCCAAAAGTA
TGCCGACACAGTCGTGACCGATTTCGAAGTTGGTTACGACTACGATAGCT
GTCTTCATTATCGACCAGGAGCCTTCTCTATCAACGGCGAGGATACTATA
GTTCCCCTAGATTCCAGTGCGGTAATTGGACAGCGAGTGGGTCTTAGCTC
CAAGGACATCGATAAGATCAACATTATGTACAAGTGCCCCATTTTGCTGG
CAAGCTTTCTAGACCAT

BO17551.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:58:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG15255-RB 786 CG15255-PB 1..783 17..799 3915 100 Plus
CG15255-RA 786 CG15255-PA 1..783 17..799 3915 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:58:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG15255-RB 1549 CG15255-RB 35..817 17..799 3915 100 Plus
CG15255-RA 988 CG15255-RA 35..817 17..799 3915 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:58:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15610903..15611685 799..17 3915 100 Minus
Blast to na_te.dros performed on 2014-11-27 14:58:38 has no hits.

BO17551.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:23:16 Download gff for BO17551.complete
Subject Subject Range Query Range Percent Splice Strand
CG15255-RA 1..786 17..802 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:43:11 Download gff for BO17551.complete
Subject Subject Range Query Range Percent Splice Strand
CG15255-RA 407..1192 17..802 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:27 Download gff for BO17551.complete
Subject Subject Range Query Range Percent Splice Strand
CG15255-RA 35..817 17..801 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:23:16 Download gff for BO17551.complete
Subject Subject Range Query Range Percent Splice Strand
CG15255-RA 407..1192 17..802 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:57:07 Download gff for BO17551.complete
Subject Subject Range Query Range Percent Splice Strand
CG15255-RA 35..817 17..801 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:57:07 Download gff for BO17551.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15610900..15611685 17..801 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:27 Download gff for BO17551.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15610900..15611685 17..801 99   Minus

BO17551.pep Sequence

Translation from 16 to 817

> BO17551.pep
MSRSGIIYVLLLQVVLNSGKPLPAGVYDPEEAGGFVEGDMMLTEEQQRNL
EQGAPKARNGLINTEKRWPGNVVVYRISDDFDTAHKKAIQTGIDTLELHT
CLRFREATDEDKAYLTVTAKSGGCYTAVGYQGAPQEMNLEIYPLGEGCFR
PGTILHEFMHALGFYHQQSSSIRDDFINVIYENIVPGKEFNFQKYADTVV
TDFEVGYDYDSCLHYRPGAFSINGEDTIVPLDSSAVIGQRVGLSSKDIDK
INIMYKCPILLASFLDH

BO17551.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:57:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG15255-PB 261 CG15255-PB 1..261 1..261 1378 100 Plus
CG15255-PA 261 CG15255-PA 1..261 1..261 1378 100 Plus
CG15254-PB 254 CG15254-PB 30..251 28..258 591 48.9 Plus
CG15254-PA 254 CG15254-PA 30..251 28..258 591 48.9 Plus
CG15253-PA 253 CG15253-PA 7..249 9..258 548 44.1 Plus