Clone Sequence Records
BO17666.3prime Sequence
694 bp (620 high quality bases) assembled on 2006-10-13
> BO17666.3prime
ATGGTCTAGAAAGCTTGCAGTGAAAACGAATGCCACTTTATTTAGCAGCT
CCAGCAAATGTGTCCAGGAATTGGGGGGTAGTTGGGCACGCAGCTGCTGG
GCGAACTGCCGGCGACATATGGATCCGGTGGCCAGCATCAGGTAGGTTAT
GTATGTGGCCTCGTTCACGGGCAGCTGCGAGACAGCCGTGACTGGTGCAT
CAGCGGTCAATTGCATCTCATCCAAGTCTAGGTAGGGCAGGTGGCGATTC
CAATGGTCGATTAGGTAGGCAATAAGGCTGCCGGCCAGACGTACATGCTC
CATACTGGCCCAGAATCTCATCTCATTGGCGGATTGCGATACGAACAGAA
AGATATTGTGCAGGAAGCCGGTGCAAGCGGTAGATCCGCCCTCCGATAAA
GTGTCACAGATCATGTGGCGCATTAGGTAGCAATCCTTGTGAATTTCGCT
GTCCTTTGGCTCCCTAAAAAGCTGCAGCCACACCTGGTACTCAATCAGCT
CCATGGAGCGCTTTATTGCGGTCTGCATGTCCTCAAGGCTGGATAAGCGG
CCAATCCGCTTGACTAGCCGTCGCATCTGCTGAAGATCGGGATTGATAAA
ATCGCTGGAAGAAGCGCATCCGATTGGCGTATTGCCGACCAGTCCAATCA
CCGATCTCACTCCACGCAGGCTGAATCTCGGCCAACGTTCGATG
BO17666.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:16:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8191-PA | 1038 | CG8191-RA | 441..1035 | 613..19 | 2975 | 100 | Minus |
| CG8191-PA | 1038 | CG8191-RA | 358..406 | 694..646 | 245 | 100 | Minus |
| CG8191-PA | 1038 | CG8191-RA | 406..441 | 647..612 | 180 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:57:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8191-RA | 1486 | CG8191-RA | 371..1048 | 694..19 | 3340 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:57:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15732548..15733225 | 694..19 | 3290 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-12 17:57:54 has no hits.
BO17666.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:11:23 Download gff for
BO17666.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-PA | 358..1038 | 15..694 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:45:48 Download gff for
BO17666.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 371..1053 | 12..694 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:59:56 Download gff for
BO17666.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 371..1053 | 12..694 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:59:56 Download gff for
BO17666.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15732548..15733230 | 12..694 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:45:48 Download gff for
BO17666.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15626581..15627263 | 12..694 | 99 | | Minus |
BO17666.5prime Sequence
747 bp (674 high quality bases) assembled on 2006-10-13
> BO17666.5prime
GAAGTTATCAGTCGACATGGATTTGTTTATCCGAAAAGAACTGAGCCTAT
CCACGAGCAGCGTGCTTGAAGATGTGGCGCCGCACTGTCTCAAGCTACTC
ACATGGCTGCACGATTGTCAGGAGGAGATGCACTCCGAGCACCGCCATCT
GCGACTGAGCCAATCCGTTGTGGAATCCCTGCTAAAGGCTCACCTGTACC
TGTTCGAGTGCTATGATCGCTTCGGGCAATCGCTGGCCGAACGCTGCGAT
TGCCGTGGCTTCTTCGCTAGCTGCTCTGCATTGGTGGATCGACGGAAGTG
TATTCGTGAGCTGTGTACCACCATCGTGAACACACGAAAGGGAGAAACTC
ATGCACCACTGCTTCATCTTTCGCATCGAACGTTGGCCGAGATTCAGCCT
GCGTGGAGTGAGATCGGTGATTTGGACTGGTCGGCAATACGCCAATCGGA
TGCGCTTTCTTCCAGCGATTTTATCAATCCCGATCTTCAGCAGATGCGAC
GGCTAGTCAAGCGGATTGGCCGCTTATCCAGCCTTGAGGACATGCAGACC
GCAATAAAGCGCTCCATGGAGCTGATTGAGTACCAGGTGTGGCTGCAGCT
TTTTAGGGAGCCAAAGGACAGCGAAATTCACAAGGATTGCTACCTAATGC
GCCACATGATCTGTGACACTTTATCGGAGGGCGGATCTACCGCTTGCACC
GGCTTCCTGCACAATATCTTTCTGTTCGTATCGCAATCCGCCAATGA
BO17666.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:16:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8191-PA | 1038 | CG8191-RA | 1..731 | 17..747 | 3655 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:25:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8191-RA | 1486 | CG8191-RA | 14..744 | 17..747 | 3655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:25:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15732191..15732921 | 17..747 | 3655 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:25:56 has no hits.
BO17666.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:11:25 Download gff for
BO17666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-PA | 1..730 | 17..746 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:48:58 Download gff for
BO17666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 6..743 | 9..746 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:38:05 Download gff for
BO17666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 6..743 | 9..746 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:38:05 Download gff for
BO17666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15732183..15732920 | 9..746 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:48:58 Download gff for
BO17666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15626216..15626953 | 9..746 | 99 | | Plus |
BO17666.complete Sequence
1069 bp assembled on 2006-10-11
GenBank Submission: FJ634189
> BO17666.complete
GAAGTTATCAGTCGACATGGATTTGTTTATCCGAAAAGAACTGAGCCTAT
CCACGAGCAGCGTGCTTGAAGATGTGGCGCCGCACTGTCTCAAGCTACTC
ACATGGCTGCACGATTGTCAGGAGGAGATGCACTCCGAGCACCGCCATCT
GCGACTGAGCCAATCCGTTGTGGAATCCCTGCTAAAGGCTCACCTGTACC
TGTTCGAGTGCTATGATCGCTTCGGGCAATCGCTGGCCGAACGCTGCGAT
TGCCGTGGCTTCTTCGCTAGCTGCTCTGCATTGGTGGATCGACGGAAGTG
TATTCGTGAGCTGTGTACCACCATCGTGAACACACGAAAGGGAGAAACTC
ATGCACCACTGCTTCATCTTTCGCATCGAACGTTGGCCGAGATTCAGCCT
GCGTGGAGTGAGATCGGTGATTTGGACTGGTCGGCAATACGCCAATCGGA
TGCGCTTTCTTCCAGCGATTTTATCAATCCCGATCTTCAGCAGATGCGAC
GGCTAGTCAAGCGGATTGGCCGCTTATCCAGCCTTGAGGACATGCAGACC
GCAATAAAGCGCTCCATGGAGCTGATTGAGTACCAGGTGTGGCTGCAGCT
TTTTAGGGAGCCAAAGGACAGCGAAATTCACAAGGATTGCTACCTAATGC
GCCACATGATCTGTGACACTTTATCGGAGGGCGGATCTACCGCTTGCACC
GGCTTCCTGCACAATATCTTTCTGTTCGTATCGCAATCCGCCAATGAGAT
GAGATTCTGGGCCAGTATGGAGCATGTACGTCTGGCCGGCAGCCTTATTG
CCTACCTAATCGACCATTGGAATCGCCACCTGCCCTACCTAGACTTGGAT
GAGATGCAATTGACCGCTGATGCACCAGTCACGGCTGTCTCGCAGCTGCC
CGTGAACGAGGCCACATACATAACCTACCTGATGCTGGCCACCGGATCCA
TATGTCGCCGGCAGTTCGCCCAGCAGCTGCGTGCCCAACTACCCCCCAAT
TCCTGGACACATTTGCTGGAGCTGCTAAATAAAGTGGCATTCGTTTTCAC
TGCAAGCTTTCTAGACCAT
BO17666.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:31:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8191-RA | 1038 | CG8191-PA | 1..1035 | 17..1051 | 5175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:31:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8191-RA | 1486 | CG8191-RA | 14..1048 | 17..1051 | 5175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:31:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15732191..15733225 | 17..1051 | 5175 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:31:22 has no hits.
BO17666.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:23:00 Download gff for
BO17666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 1..1038 | 17..1055 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:42:44 Download gff for
BO17666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 2..1049 | 9..1058 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:30 Download gff for
BO17666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 14..1048 | 17..1053 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:23:01 Download gff for
BO17666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 2..1049 | 9..1058 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:13:33 Download gff for
BO17666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 14..1048 | 17..1053 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:13:33 Download gff for
BO17666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15732191..15733225 | 17..1053 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:30 Download gff for
BO17666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15626224..15627258 | 17..1053 | 99 | | Plus |
BO17666.pep Sequence
Translation from 16 to 1069
> BO17666.pep
MDLFIRKELSLSTSSVLEDVAPHCLKLLTWLHDCQEEMHSEHRHLRLSQS
VVESLLKAHLYLFECYDRFGQSLAERCDCRGFFASCSALVDRRKCIRELC
TTIVNTRKGETHAPLLHLSHRTLAEIQPAWSEIGDLDWSAIRQSDALSSS
DFINPDLQQMRRLVKRIGRLSSLEDMQTAIKRSMELIEYQVWLQLFREPK
DSEIHKDCYLMRHMICDTLSEGGSTACTGFLHNIFLFVSQSANEMRFWAS
MEHVRLAGSLIAYLIDHWNRHLPYLDLDEMQLTADAPVTAVSQLPVNEAT
YITYLMLATGSICRRQFAQQLRAQLPPNSWTHLLELLNKVAFVFTASFLD
H
BO17666.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:04:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8191-PA | 345 | CG8191-PA | 1..345 | 1..345 | 1813 | 100 | Plus |
