Clone Sequence Records
BO17749.3prime Sequence
335 bp (335 high quality bases) assembled on 2006-10-13
> BO17749.3prime
ATGGTCTAGAAAGCTTGCCATGGGAAACCAGTCTGTGTTGGTGGGCAGTC
CGTGGAGTGCTCCGTGGGACTCGATAATCTCGTCGCAATGGTCGTGGGCA
CGACAGCACTTGTCCGTCTCCCGTTCGCGGCCCAAATCCTCGAAGTTCGC
CGCCGTGTTGCCCGGTCCGCACCACTTGGTTCCGGGCACCGTGATGCCCG
TATGGGGAACTGGTGGCAGTGCCTGGTTGTAGATGTCCTCGTCCTCAAAG
ATAGCCTCGTCGCCGAAGGCCCAAGCCATGGCCAGTAGCCCAAAAAAGAA
CGCTTCGCGCAGCAGCCACATGTCGACTGATAACT
BO17749.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 18:09:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11124-PB | 306 | sPLA2-RB | 1..303 | 321..19 | 1515 | 100 | Minus |
CG11124-PA | 561 | sPLA2-RA | 1..302 | 321..20 | 1510 | 100 | Minus |
CG11124-PC | 561 | sPLA2-RC | 1..302 | 321..20 | 1510 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:48:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
sPLA2-RB | 725 | CG11124-RB | 29..334 | 324..19 | 1530 | 100 | Minus |
sPLA2-RC | 897 | CG11124-RC | 208..512 | 324..20 | 1525 | 100 | Minus |
sPLA2-RA | 718 | CG11124-RA | 29..333 | 324..20 | 1525 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:48:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7443071..7443376 | 324..19 | 1530 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 17:48:22 has no hits.
BO17749.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:12:26 Download gff for
BO17749.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11124-PB | 1..306 | 15..321 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 20:14:24 Download gff for
BO17749.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 29..343 | 8..324 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:19:14 Download gff for
BO17749.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 29..343 | 8..324 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:19:14 Download gff for
BO17749.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7443071..7443381 | 13..324 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 20:14:24 Download gff for
BO17749.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3330576..3330886 | 13..324 | 99 | | Minus |
BO17749.5prime Sequence
335 bp (335 high quality bases) assembled on 2006-10-13
> BO17749.5prime
GAAGTTATCAGTCGACATGTGGCTGCTGCGCGAAGCGTTCTTTTTTGGGC
TACTGGCCATGGCTTGGGCCTTCGGCGACGAGGCTATCTTTGAGGACGAG
GACATCTACAACCAGGCACTGCCACCAGTTCCCCATACGGGCATCACGGT
GCCCGGAACCAAGTGGTGCGGACCGGGCAACACGGCGGCGAACTTCGAGG
ATTTGGGCCGCGAACGGGAGACGGACAAGTGCTGTCGTGCCCACGACCAT
TGCGACGAGATTATCGAGTCCCACGGAGCACTCCACGGACTGCCCACCAA
CACAGACTGGTTTCCCATGGCAAGCTTTCTAGACC
BO17749.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 18:09:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11124-PB | 306 | sPLA2-RB | 1..303 | 17..319 | 1515 | 100 | Plus |
CG11124-PA | 561 | sPLA2-RA | 1..302 | 17..318 | 1510 | 100 | Plus |
CG11124-PC | 561 | sPLA2-RC | 1..302 | 17..318 | 1510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:09:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
sPLA2-RB | 725 | CG11124-RB | 29..334 | 14..319 | 1530 | 100 | Plus |
sPLA2-RC | 897 | CG11124-RC | 208..512 | 14..318 | 1525 | 100 | Plus |
sPLA2-RA | 718 | CG11124-RA | 29..333 | 14..318 | 1525 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:08:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7443071..7443376 | 14..319 | 1530 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 06:09:03 has no hits.
BO17749.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:12:27 Download gff for
BO17749.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11124-PB | 1..306 | 17..323 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:11:00 Download gff for
BO17749.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 29..343 | 14..330 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:00:51 Download gff for
BO17749.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 29..343 | 14..330 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:00:51 Download gff for
BO17749.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7443071..7443381 | 14..325 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:11:00 Download gff for
BO17749.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3330576..3330886 | 14..325 | 99 | | Plus |
BO17749.complete Sequence
337 bp assembled on 2007-10-17
GenBank Submission: FJ634200
> BO17749.complete
GAAGTTATCAGTCGACATGTGGCTGCTGCGCGAAGCGTTCTTTTTTGGGC
TACTGGCCATGGCTTGGGCCTTCGGCGACGAGGCTATCTTTGAGGACGAG
GACATCTACAACCAGGCACTGCCACCAGTTCCCCATACGGGCATCACGGT
GCCCGGAACCAAGTGGTGCGGACCGGGCAACACGGCGGCGAACTTCGAGG
ATTTGGGCCGCGAACGGGAGACGGACAAGTGCTGTCGTGCCCACGACCAT
TGCGACGAGATTATCGAGTCCCACGGAGCACTCCACGGACTGCCCACCAA
CACAGACTGGTTTCCCATGGCAAGCTTTCTAGACCAT
BO17749.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:39:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
sPLA2-RB | 306 | CG11124-PB | 1..303 | 17..319 | 1515 | 100 | Plus |
sPLA2-RC | 561 | CG11124-PC | 1..302 | 17..318 | 1510 | 100 | Plus |
sPLA2-RA | 561 | CG11124-PA | 1..302 | 17..318 | 1510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:39:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
sPLA2-RB | 725 | CG11124-RB | 29..334 | 14..319 | 1530 | 100 | Plus |
sPLA2-RC | 897 | CG11124-RC | 208..512 | 14..318 | 1525 | 100 | Plus |
sPLA2-RA | 718 | CG11124-RA | 29..333 | 14..318 | 1525 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:39:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7443071..7443376 | 14..319 | 1530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:39:32 has no hits.
BO17749.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:03:33 Download gff for
BO17749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 1..306 | 17..323 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:01:31 Download gff for
BO17749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 27..341 | 14..330 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:34:43 Download gff for
BO17749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 32..334 | 17..321 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:29:38 Download gff for
BO17749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 30..332 | 17..321 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:05:35 Download gff for
BO17749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 32..334 | 17..321 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:05:35 Download gff for
BO17749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7443074..7443376 | 17..321 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:34:43 Download gff for
BO17749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3330579..3330881 | 17..321 | 99 | | Plus |
BO17749.pep Sequence
Translation from 16 to 337
> BO17749.pep
MWLLREAFFFGLLAMAWAFGDEAIFEDEDIYNQALPPVPHTGITVPGTKW
CGPGNTAANFEDLGRERETDKCCRAHDHCDEIIESHGALHGLPTNTDWFP
MASFLDH
BO17749.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:33:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
sPLA2-PB | 101 | CG11124-PB | 1..101 | 1..101 | 578 | 100 | Plus |
sPLA2-PC | 186 | CG11124-PC | 1..101 | 1..101 | 574 | 99 | Plus |
sPLA2-PA | 186 | CG11124-PA | 1..101 | 1..101 | 574 | 99 | Plus |
CG30503-PB | 173 | CG30503-PB | 26..85 | 43..103 | 201 | 62.3 | Plus |
CG30503-PA | 173 | CG30503-PA | 26..85 | 43..103 | 201 | 62.3 | Plus |