Clone Sequence Records
BO17894.5prime Sequence
182 bp (182 high quality bases) assembled on 2006-10-13
> BO17894.5prime
GAAGTTATCAGTCGACATGCCGAAAGCGGAGTGCGAGATGCTCGTGGTTA
AGGTCATGGCAACTACGGACATGGCAACTACGGACATGGCAACTACGGAC
ATGGTCATCACGGGGGTGGTGGTCATGGACATGGACATTATGGTCGCTAG
TGTATTTATACATTTTGCAAGCTTTCTAGACC
BO17894.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 18:27:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30029-PA | 153 | CG30029-RA | 1..150 | 17..166 | 750 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-11 22:08:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:08:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11246289..11246440 | 15..166 | 760 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 22:08:11 has no hits.
BO17894.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:14:59 Download gff for
BO17894.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30029-PA | 1..153 | 17..170 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:44:49 Download gff for
BO17894.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11246285..11246446 | 9..173 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:44:49 Download gff for
BO17894.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11246285..11246446 | 9..173 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 04:23:39 Download gff for
BO17894.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7133790..7133951 | 9..173 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 04:23:39 Download gff for
BO17894.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7133790..7133951 | 9..173 | 96 | | Plus |
BO17894.3prime Sequence
182 bp (182 high quality bases) assembled on 2006-10-13
> BO17894.3prime
ATGGTCTAGAAAGCTTGCAAAATGTATAAATACACTAGCGACCATAATGT
CCATGTCCATGACCACCACCCCCGTGATGACCATGTCCGTAGTTGCCATG
TCCGTAGTTGCCATGTCCGTAGTTGCCATGACCTTAACCACGAGCATCTC
GCACTCCGCTTTCGGCATGTCGACTGATAACT
BO17894.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 18:26:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30029-PA | 153 | CG30029-RA | 1..150 | 168..19 | 750 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 11:05:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:05:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11246289..11246440 | 170..19 | 760 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:05:28 has no hits.
BO17894.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:14:57 Download gff for
BO17894.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30029-PA | 1..153 | 15..168 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:20:13 Download gff for
BO17894.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11246285..11246446 | 12..176 | 96 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:20:13 Download gff for
BO17894.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11246285..11246446 | 12..176 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 21:34:44 Download gff for
BO17894.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7133790..7133951 | 12..176 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 21:34:44 Download gff for
BO17894.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7133790..7133951 | 12..176 | 96 | | Minus |
BO17894.complete Sequence
184 bp assembled on 2007-12-19
> BO17894.complete
GAAGTTATCAGTCGACATGCCGAAAGCGGAGTGCGAGATGCTCGTGGTTA
AGGTCATGGCAACTACGGACATGGCAACTACGGACATGGCAACTACGGAC
ATGGTCATCACGGGGGTGGTGGTCATGGACATGGACATTATGGTCGCTAG
TGTATTTATACATTTTGCAAGCTTTCTAGACCAT
BO17894.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 13:41:38 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 13:41:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:41:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11246289..11246440 | 15..166 | 760 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:41:37 has no hits.
BO17894.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:03:38 Download gff for
BO17894.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34226-RA | 104..144 | 9..51 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:30:12 Download gff for
BO17894.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34226-RA | 173..322 | 17..168 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:03:38 Download gff for
BO17894.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34226-RA | 167..328 | 9..173 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:53:46 Download gff for
BO17894.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11246291..11246440 | 17..168 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:53:46 Download gff for
BO17894.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11246291..11246440 | 17..168 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:22:19 Download gff for
BO17894.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7133796..7133945 | 17..168 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:22:19 Download gff for
BO17894.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7133796..7133945 | 17..168 | 98 | | Plus |
BO17894.pep Sequence
Translation from 16 to 184
> BO17894.pep
MPKAECEMLVVKVMATTDMATTDMATTDMVITGVVVMDMDIMVASVFIHF
ASFLDH
Sequence BO17894.pep has no blast hits.