Clone BO17914 Report

Search the DGRC for BO17914

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:179
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptCG12728-RA
Protein status:BO17914.pep: validated full length
Sequenced Size:1465

Clone Sequence Records

BO17914.3prime Sequence

806 bp (692 high quality bases) assembled on 2006-10-13

> BO17914.3prime
ATGGTCTAGAAAGCTTGCTTTTTGCGCTAACTTATTGATATAGCTCTGGA
TCGCTTTTTCGATGCGTTCAGTTGAGTAAATCAGTACGGCTTTGATATCT
TCCAGCACAGTTCGAAGAATTAAATCCCAATTCTGATCGGACTTTCCGAC
TTTGGGTTCTTGGATGAGTTCCCTTGGGGCATCGTAAAACTCTTTTAAAG
ATTCAACCTTCTTTATGACGAAATTGAAAGCGTTCGATGCCTCCCTAGTG
ACCTCTTCATATTCAGAAGAAGCATCCTCATCTTTAGAAGAAGTATCCTC
ATCTTTAGACGGAGCATCCTCATCTTTAGAAGAAGTATTCTCATCTTTGG
AAGAAGCATCCTCATCTTTAGAAGAAGCATCCTCATATTTAGAAGAAGTA
TCCCCATTTTTAGAAGAAGCATCCTCATCTTCAGAAGAAGCATACTGTTC
CTGAGATGCAAGTTCATATACACCACTTCCGACGGTTGGATTAAATTTGG
TTAGTTTGGCCGACCATCCTTGGGAAAGCCCCGAAGATGTGGATGACTCT
TCGTCATCATCAGTGAGATCATTCTTGGTGTCCATTGGCGCTAGCTCTAC
TTTTAAGATTAAATTTACGTTTGTCTCTTGGGAACTCTGCGAGCTTTTGT
ACTCGACAAGCGGATTGGAGCGGCGCTGCATTACCTTGCGCTCCATATGA
TTGGTATTGAATTCAAGAGCCTTGCGCTTCCTAATGCGAGGAGCTTCTTT
TGGGCTTGATGCCTTCGAAGAAGCAAAGTAACCGTTTGACGAAGAAAAGG
GCGCGA

BO17914.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 18:29:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG12728-PA 1434 CG12728-RA 644..1431 806..19 3865 99.6 Minus
CG32756-PA 1380 CG32756-RA 644..938 806..512 1375 98.6 Minus
CG32756-PA 1380 CG32756-RA 947..1112 506..341 705 96.9 Minus
CG32756-PA 1380 CG32756-RA 1010..1202 422..227 335 86.7 Minus
CG32756-PA 1380 CG32756-RA 1031..1118 443..356 215 89.7 Minus
CG32756-PA 1380 CG32756-RA 1302..1339 106..69 140 94.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:02:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG12728-RB 2374 CG12728-RB 721..1508 806..19 3895 99.6 Minus
CG12728-RA 1746 CG12728-RA 721..1508 806..19 3895 99.6 Minus
CG32756-RB 2397 CG32756-RB 723..1438 806..49 2240 87.3 Minus
CG12728-RB 2374 CG12728-RB 1087..1228 398..257 455 88 Minus
CG12728-RB 2374 CG12728-RB 1129..1270 440..299 455 88 Minus
CG12728-RA 1746 CG12728-RA 1087..1228 398..257 455 88 Minus
CG12728-RA 1746 CG12728-RA 1129..1270 440..299 455 88 Minus
CG12728-RB 2374 CG12728-RB 1084..1207 380..257 410 88.7 Minus
CG12728-RB 2374 CG12728-RB 1147..1270 443..320 410 88.7 Minus
CG12728-RA 1746 CG12728-RA 1084..1207 380..257 410 88.7 Minus
CG12728-RA 1746 CG12728-RA 1147..1270 443..320 410 88.7 Minus
CG12728-RB 2374 CG12728-RB 1084..1177 359..266 305 88.3 Minus
CG12728-RB 2374 CG12728-RB 1168..1261 443..350 305 88.3 Minus
CG12728-RA 1746 CG12728-RA 1084..1177 359..266 305 88.3 Minus
CG12728-RA 1746 CG12728-RA 1168..1261 443..350 305 88.3 Minus
CG12728-RB 2374 CG12728-RB 1087..1165 335..257 275 89.9 Minus
CG12728-RB 2374 CG12728-RB 1192..1270 440..362 275 89.9 Minus
CG12728-RA 1746 CG12728-RA 1087..1165 335..257 275 89.9 Minus
CG12728-RA 1746 CG12728-RA 1192..1270 440..362 275 89.9 Minus
CG12728-RB 2374 CG12728-RB 1084..1144 317..257 185 86.9 Minus
CG12728-RB 2374 CG12728-RB 1210..1270 443..383 185 86.9 Minus
CG12728-RA 1746 CG12728-RA 1084..1144 317..257 185 86.9 Minus
CG12728-RA 1746 CG12728-RA 1210..1270 443..383 185 86.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:02:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5943671..5944384 732..19 3555 99.9 Minus
X 23542271 X 5946753..5947210 732..275 1800 93.7 Minus
X 23542271 X 5943963..5944104 398..257 455 88 Minus
X 23542271 X 5944005..5944146 440..299 455 88 Minus
X 23542271 X 5947045..5947157 380..268 415 91.2 Minus
X 23542271 X 5944023..5944146 443..320 410 88.7 Minus
X 23542271 X 5943960..5944083 380..257 410 88.7 Minus
X 23542271 X 5947048..5947394 398..49 390 75 Minus
X 23542271 X 5943536..5943612 806..730 355 97.4 Minus
X 23542271 X 5946618..5946694 806..730 355 97.4 Minus
X 23542271 X 5947085..5947210 445..317 325 85.3 Minus
X 23542271 X 5947045..5947147 359..257 320 87.4 Minus
X 23542271 X 5943960..5944053 359..266 305 88.3 Minus
X 23542271 X 5944044..5944137 443..350 305 88.3 Minus
X 23542271 X 5943963..5944041 335..257 275 89.9 Minus
X 23542271 X 5944068..5944146 440..362 275 89.9 Minus
X 23542271 X 5947048..5947126 335..257 275 89.9 Minus
X 23542271 X 5943960..5944020 317..257 185 86.9 Minus
X 23542271 X 5944086..5944146 443..383 185 86.9 Minus
X 23542271 X 5947045..5947105 317..257 185 86.9 Minus
Blast to na_te.dros performed 2015-02-13 16:02:16
Subject Length Description Subject Range Query Range Score Percent Strand
invader1 4032 invader1 INVADER 4032bp 409..437 542..570 109 86.2 Plus

BO17914.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:15:19 Download gff for BO17914.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12728-PA 645..1434 15..805 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 12:38:58 Download gff for BO17914.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 722..1514 10..805 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:41:14 Download gff for BO17914.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 722..1514 10..805 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:41:14 Download gff for BO17914.3prime
Subject Subject Range Query Range Percent Splice Strand
X 5943537..5943611 731..805 97 -> Minus
X 5943673..5944390 10..730 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 12:38:58 Download gff for BO17914.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 5837570..5837644 731..805 97 -> Minus
arm_X 5837706..5838423 10..730 99   Minus

BO17914.5prime Sequence

813 bp (706 high quality bases) assembled on 2006-10-13

> BO17914.5prime
GAAGTTATCAGTCGACATGCTATTGAAAGTAGTGAATATAAATGGCTTGC
AGCACCTGTTCGCCTGCACTGAGGGGCAGCATGATGAAACCCTAACTATT
CACGTTTTCCGTCCTCGCGAGAAGTGGACTTACTCCGAGACTTTGATGAA
ACGCGATTACCAGCAGCGTTTGAAAACGCTCAACGCGCGTGTGAAGTTTC
CCGAGGAATTGGTGCGCCAGGTCCTGCTCAACAAGGATCCATTGCATGTC
GAACAGGATTACCAGCACCCATTGAACGTCCTGAAACTGAAGTATGCCAT
GGCGAATTTCAAAGTTTTCCTCAAGTGGGAATGGCACCTGAGACCCATGG
ATGCCGCACAGTTGTATAGCCAAATGTTCTTGAACACAATGTCCACGGCT
TTGGGACTACGGGTTCAGATACCCCTTCTGCTAGGGATTATCCATGCCAA
GGACAAGGAGCTGAACCAGTATCGCACCGAGGGATGCCAGCTGCGCAAAG
TGACTGTGGAAACCAAGCCCTTTGATCTCGAGGCTTTTATGAATAAGCAC
AAGCAATTGCTGGACTGTTCCGCTGCCTACCAGAAGGCGCAGAGTACTTT
TTTTGCTGATAAGCCATCGCCTAATTGGACATCGCTTTCTTCGCCATGGG
CACGGGATGTCGCGCCCTATTCTTCGTCAAACGGCTACTTTGCTTCTTCG
AAGGCATCAAGCCCAAAAGAAGCTCCTCGCATTANGAAGCGCAAGGCTCT
TGAAATCATACCAATCATATGGAGCGCAAGGTAATGCAGCGCCGCTCCCA
TCCGCTTGTCAAG

BO17914.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 18:30:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG12728-PA 1434 CG12728-RA 1..795 17..810 3891 99.6 Plus
CG32756-PA 1380 CG32756-RA 1..795 17..810 3766 98.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:30:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG12728-RB 2374 CG12728-RB 78..872 17..810 3924 99.6 Plus
CG12728-RA 1746 CG12728-RA 78..872 17..810 3924 99.6 Plus
CG32756-RB 2397 CG32756-RB 80..874 17..810 3849 99 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:30:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5943375..5943610 499..734 1180 100 Plus
X 23542271 X 5946457..5946692 499..734 1135 98.7 Plus
X 23542271 X 5942903..5943088 176..361 930 100 Plus
X 23542271 X 5945981..5946166 176..361 930 100 Plus
X 23542271 X 5942683..5942841 17..175 795 100 Plus
X 23542271 X 5945761..5945919 17..175 795 100 Plus
X 23542271 X 5943153..5943293 360..500 705 100 Plus
X 23542271 X 5946231..5946368 360..497 675 99.3 Plus
X 23542271 X 5943673..5943748 736..810 315 97.4 Plus
X 23542271 X 5946755..5946830 736..810 315 97.4 Plus
Blast to na_te.dros performed on 2015-02-13 06:30:21 has no hits.

BO17914.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:15:20 Download gff for BO17914.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12728-PA 1..798 17..813 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 19:21:55 Download gff for BO17914.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 73..875 12..813 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:42:16 Download gff for BO17914.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 73..875 12..813 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:42:16 Download gff for BO17914.5prime
Subject Subject Range Query Range Percent Splice Strand
X 5942678..5942841 12..175 98 -> Plus
X 5942903..5943088 176..361 100 -> Plus
X 5943155..5943293 362..500 100 -> Plus
X 5943377..5943611 501..735 99 -> Plus
X 5943673..5943751 736..813 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 19:21:55 Download gff for BO17914.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 5836711..5836874 12..175 98 -> Plus
arm_X 5836936..5837121 176..361 100 -> Plus
arm_X 5837188..5837326 362..500 100 -> Plus
arm_X 5837410..5837644 501..735 99 -> Plus
arm_X 5837706..5837784 736..813 96   Plus

BO17914.complete Sequence

1465 bp assembled on 2007-03-23

GenBank Submission: FJ634253

> BO17914.complete
GAAGTTATCAGTCGACATGCTATTGAAAGTAGTGAATATAAATGGCTTGC
AGCACCTGTTCGCCTGCACTGAGGGGCAGCATGATGAAACCCTAACTATT
CACGTTTTCCGTCCTCGCGAGAAGTGGACTTACTCCGAGACTTTGATGAA
ACGCGATTACCAGCAGCGTTTGAAAACGCTCAACGCGCGTGTGAAGTTTC
CCGAGGAATTGGTGCGCCAGGTCCTGCTCAACAAGGATCCATTGCATGTC
GAACAGGATTACCAGCACCCATTGAACGTCCTGAAACTGAAGTATGCCAT
GGCGAATTTCAAAGTTTTCCTCAAGTGGGAATGGCACCTGAGACCCATGG
ATGCCGCACAGTTGTATAGCCAAATGTTCTTGAACACAATGTCCACGGCT
TTGGGACTACGGGTTCAGATACCCCTTCTGCTAGGGATTATCCATGCCAA
GGACAAGGAGCTGAACCAGTATCGCACCGAGGGATGCCAGCTGCGCAAAG
TGACTGTGGAAACCAAGCCCTTTGATCTCGAGGCTTTTATGAATAAGCAC
AAGCAATTGCTGGACTGTTCCGCTGCCTACCAGAAGGCGCAGAGTACTTT
TTTTGCTGATAAGCCATCGCCTAATTGGACATCGCTTTCTTCGCCATGGG
CACGGGATGTCGCGCCCTATTCTTCGTCAAACGGCTACTTTGCTTCTTCG
AAGGCATCAAGCCCAAAAGAAGCTCCTCGCATTAGGAAGCGCAAGGCTCT
TGAAATCAATACCAATCATATGGAGCGCAAGGTAATGCAGCGCCGCTCCA
ATCCGCTTGTCGAGTACAAAAGCTCGCAGAGTTCCCAAGAGACAAACGTA
AATTTAATCTTAAAAGTAGAGCTAGCGCCAATGGACACCAAGAATGATCT
CACTGATGATGACGAAGAGTCATCCACATCTTCGGGGCTTTCCCAAGGAT
GGTCGGCCAAACTAACCAAATTTAATCCAACCGTCGGAAGTGGTGTATAT
GAACTTGCATCTCAGGAACAGTATGCTTCTTCTGAAGATGAGGATGCTTC
TTCTAAAAATGGGGATACTTCTTCTAAATATGAGGATGCTTCTTCTAAAG
ATGAGGATGCTTCTTCCAAAGATGAGAATACTTCTTCTAAAGATGAGGAT
GCTCCGTCTAAAGATGAGGATACTTCTTCTAAAGATGAGGATGCTTCTTC
TGAATATGAAGAGGTCACTAGGGAGGCATCGAACGCTTTCAATTTCGTCA
TAAAGAAGGTTGAATCTTTAAAAGAGTTTTACGATGCCCCAAGGGAACTC
ATCCAAGAACCCAAAGTCGGAAAGTCCGATCAGAATTGGGATTTAATTCT
TCGAACTGTGCTGGAAGATATCAAAGCCGTACTGATTTACTCAACTGAAC
GCATCGAAAAAGCGATCCAGAGCTATATCAATAAGTTAGCGCAAAAAGCA
AGCTTTCTAGACCAT

BO17914.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG12728-RB 1434 CG12728-PB 1..1431 17..1447 7155 100 Plus
CG12728-RA 1434 CG12728-PA 1..1431 17..1447 7155 100 Plus
CG32756-RB 1380 CG32756-PB 1..1175 17..1191 5325 97.2 Plus
CG12728-RB 1434 CG12728-PB 1010..1151 1068..1209 455 88 Plus
CG12728-RB 1434 CG12728-PB 1052..1193 1026..1167 455 88 Plus
CG12728-RA 1434 CG12728-PA 1010..1151 1068..1209 455 88 Plus
CG12728-RA 1434 CG12728-PA 1052..1193 1026..1167 455 88 Plus
CG12728-RB 1434 CG12728-PB 1007..1130 1086..1209 410 88.7 Plus
CG12728-RB 1434 CG12728-PB 1070..1193 1023..1146 410 88.7 Plus
CG12728-RA 1434 CG12728-PA 1007..1130 1086..1209 410 88.7 Plus
CG12728-RA 1434 CG12728-PA 1070..1193 1023..1146 410 88.7 Plus
CG12728-RB 1434 CG12728-PB 1007..1100 1107..1200 305 88.3 Plus
CG12728-RB 1434 CG12728-PB 1091..1184 1023..1116 305 88.3 Plus
CG12728-RA 1434 CG12728-PA 1007..1100 1107..1200 305 88.3 Plus
CG12728-RA 1434 CG12728-PA 1091..1184 1023..1116 305 88.3 Plus
CG12728-RB 1434 CG12728-PB 1010..1088 1131..1209 275 89.9 Plus
CG12728-RB 1434 CG12728-PB 1115..1193 1026..1104 275 89.9 Plus
CG12728-RA 1434 CG12728-PA 1010..1088 1131..1209 275 89.9 Plus
CG12728-RA 1434 CG12728-PA 1115..1193 1026..1104 275 89.9 Plus
CG12728-RB 1434 CG12728-PB 1007..1067 1149..1209 185 86.9 Plus
CG12728-RB 1434 CG12728-PB 1133..1193 1023..1083 185 86.9 Plus
CG12728-RA 1434 CG12728-PA 1007..1067 1149..1209 185 86.9 Plus
CG12728-RA 1434 CG12728-PA 1133..1193 1023..1083 185 86.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:20:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG12728-RB 2374 CG12728-RB 78..1508 17..1447 7155 100 Plus
CG12728-RA 1746 CG12728-RA 78..1508 17..1447 7155 100 Plus
CG32756-RB 2397 CG32756-RB 80..1254 17..1191 5325 97.2 Plus
CG12728-RB 2374 CG12728-RB 1087..1228 1068..1209 455 88 Plus
CG12728-RB 2374 CG12728-RB 1129..1270 1026..1167 455 88 Plus
CG12728-RA 1746 CG12728-RA 1087..1228 1068..1209 455 88 Plus
CG12728-RA 1746 CG12728-RA 1129..1270 1026..1167 455 88 Plus
CG12728-RB 2374 CG12728-RB 1084..1207 1086..1209 410 88.7 Plus
CG12728-RB 2374 CG12728-RB 1147..1270 1023..1146 410 88.7 Plus
CG12728-RA 1746 CG12728-RA 1084..1207 1086..1209 410 88.7 Plus
CG12728-RA 1746 CG12728-RA 1147..1270 1023..1146 410 88.7 Plus
CG12728-RB 2374 CG12728-RB 1084..1177 1107..1200 305 88.3 Plus
CG12728-RB 2374 CG12728-RB 1168..1261 1023..1116 305 88.3 Plus
CG12728-RA 1746 CG12728-RA 1084..1177 1107..1200 305 88.3 Plus
CG12728-RA 1746 CG12728-RA 1168..1261 1023..1116 305 88.3 Plus
CG12728-RB 2374 CG12728-RB 1087..1165 1131..1209 275 89.9 Plus
CG12728-RB 2374 CG12728-RB 1192..1270 1026..1104 275 89.9 Plus
CG12728-RA 1746 CG12728-RA 1087..1165 1131..1209 275 89.9 Plus
CG12728-RA 1746 CG12728-RA 1192..1270 1026..1104 275 89.9 Plus
CG12728-RB 2374 CG12728-RB 1084..1144 1149..1209 185 86.9 Plus
CG12728-RB 2374 CG12728-RB 1210..1270 1023..1083 185 86.9 Plus
CG12728-RA 1746 CG12728-RA 1210..1270 1023..1083 185 86.9 Plus
CG12728-RA 1746 CG12728-RA 1084..1144 1149..1209 185 86.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:20:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5943671..5944384 734..1447 3570 100 Plus
X 23542271 X 5946753..5947210 734..1191 1815 93.9 Plus
X 23542271 X 5943375..5943612 499..736 1190 100 Plus
X 23542271 X 5946457..5946694 499..736 1145 98.7 Plus
X 23542271 X 5942903..5943088 176..361 930 100 Plus
X 23542271 X 5945981..5946166 176..361 930 100 Plus
X 23542271 X 5942683..5942841 17..175 795 100 Plus
X 23542271 X 5945761..5945919 17..175 795 100 Plus
X 23542271 X 5943153..5943293 360..500 705 100 Plus
X 23542271 X 5946231..5946368 360..497 675 99.3 Plus
X 23542271 X 5943963..5944104 1068..1209 455 88 Plus
X 23542271 X 5944005..5944146 1026..1167 455 88 Plus
X 23542271 X 5947045..5947157 1086..1198 415 91.2 Plus
X 23542271 X 5943960..5944083 1086..1209 410 88.7 Plus
X 23542271 X 5944023..5944146 1023..1146 410 88.7 Plus
X 23542271 X 5947048..5947394 1068..1417 390 75 Plus
X 23542271 X 5947085..5947210 1021..1149 325 85.3 Plus
X 23542271 X 5947045..5947147 1107..1209 320 87.4 Plus
X 23542271 X 5943960..5944053 1107..1200 305 88.3 Plus
X 23542271 X 5944044..5944137 1023..1116 305 88.3 Plus
X 23542271 X 5943963..5944041 1131..1209 275 89.9 Plus
X 23542271 X 5944068..5944146 1026..1104 275 89.9 Plus
X 23542271 X 5947048..5947126 1131..1209 275 89.9 Plus
X 23542271 X 5943960..5944020 1149..1209 185 86.9 Plus
X 23542271 X 5944086..5944146 1023..1083 185 86.9 Plus
X 23542271 X 5947045..5947105 1149..1209 185 86.9 Plus
Blast to na_te.dros performed on 2014-11-27 13:20:16 has no hits.

BO17914.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:09:54 Download gff for BO17914.complete
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 1..1434 17..1451 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:27:11 Download gff for BO17914.complete
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 71..1509 12..1451 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:31:20 Download gff for BO17914.complete
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 78..1503 17..1442 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:09:54 Download gff for BO17914.complete
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 71..1509 12..1451 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:16:08 Download gff for BO17914.complete
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 78..1503 17..1442 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:16:08 Download gff for BO17914.complete
Subject Subject Range Query Range Percent Splice Strand
X 5942683..5942841 17..175 100 -> Plus
X 5942903..5943088 176..361 100 -> Plus
X 5943155..5943293 362..500 100 -> Plus
X 5943377..5943611 501..735 100 -> Plus
X 5943673..5944379 736..1442 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:31:20 Download gff for BO17914.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 5836716..5836874 17..175 100 -> Plus
arm_X 5836936..5837121 176..361 100 -> Plus
arm_X 5837188..5837326 362..500 100 -> Plus
arm_X 5837410..5837644 501..735 100 -> Plus
arm_X 5837706..5838412 736..1442 100   Plus

BO17914.pep Sequence

Translation from 16 to 1465

> BO17914.pep
MLLKVVNINGLQHLFACTEGQHDETLTIHVFRPREKWTYSETLMKRDYQQ
RLKTLNARVKFPEELVRQVLLNKDPLHVEQDYQHPLNVLKLKYAMANFKV
FLKWEWHLRPMDAAQLYSQMFLNTMSTALGLRVQIPLLLGIIHAKDKELN
QYRTEGCQLRKVTVETKPFDLEAFMNKHKQLLDCSAAYQKAQSTFFADKP
SPNWTSLSSPWARDVAPYSSSNGYFASSKASSPKEAPRIRKRKALEINTN
HMERKVMQRRSNPLVEYKSSQSSQETNVNLILKVELAPMDTKNDLTDDDE
ESSTSSGLSQGWSAKLTKFNPTVGSGVYELASQEQYASSEDEDASSKNGD
TSSKYEDASSKDEDASSKDENTSSKDEDAPSKDEDTSSKDEDASSEYEEV
TREASNAFNFVIKKVESLKEFYDAPRELIQEPKVGKSDQNWDLILRTVLE
DIKAVLIYSTERIEKAIQSYINKLAQKASFLDH

BO17914.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:42:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG12728-PB 477 CG12728-PB 1..477 1..477 2449 100 Plus
CG12728-PA 477 CG12728-PA 1..477 1..477 2449 100 Plus
CG32756-PB 459 CG32756-PB 1..459 1..473 2037 85.7 Plus
CG32756-PA 459 CG32756-PA 1..459 1..473 2037 85.7 Plus
CG14692-PE 2851 CG14692-PE 1136..1386 182..442 164 26.3 Plus