Clone BO18031 Report

Search the DGRC for BO18031

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:180
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptGstE5-RA
Protein status:BO18031.pep: validated full length
Sequenced Size:700

Clone Sequence Records

BO18031.3prime Sequence

698 bp (698 high quality bases) assembled on 2006-10-13

> BO18031.3prime
ATGGTCTAGAAAGCTTGCGGTTGCAAAGGTGAAATTAGTGGACTTTAGAA
TGGTCTCCAACTCCCGGGCTCCCTTCGCATTGGCCTCCTCGTAGTAAGGC
AGCTTCTCCAAACGCCTGACCCATTCGATGATCCTGGGATATTTCAACCT
ATCGATCTCCACGAACGCCACCAGCGAGGTAATCGACGAGATCAGGCTAA
AATCGGCAATGGTCAACTGATCCCCAGCAATGTAATCATGTCCAGCGAGG
AAGGTCTCCACAAAGTCATAGATCTCGACAATGGCATCGTAGCGTTCCTT
GGGAATCCTGTTCAGGCCATTAAAGAATAACGGCTTGGTAATGGCCTTAA
TGCCATTGGCGAAAACCACTCCTGTCTCGAAGTGCAGTCGTTGATCCACC
ACAGCTCGCTGGAGCAGATCTCTGGGATACAGGGCATCCGAATCTGCATA
TTTGGACACCAGATACGCGATAATGGCATGCGAGTCCCAAATGTAGTTAC
CATCATCCTCCAGTGTTGGCACCGTGTGCTCTGGATTCTTTTTTAGATAT
TCCTCAGAAAGCTGCTCCTGACCCGAAATATTAACGTTTACAAACTCATA
GGGCAGCTGGAGGGCAGCCAGAGTGAGTTTGACGGCACGAACTGGTGGAC
TGGGATTCACACCATATAGAGTTAACTTGACCATGTCGACTGATAACT

BO18031.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:18:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG17527-PA 669 GstE5-RA 1..666 684..19 3330 100 Minus
CG17530-PA 669 GstE6-RA 145..254 540..431 175 86.3 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:55:10
Subject Length Description Subject Range Query Range Score Percent Strand
GstE5-RA 734 CG17527-RA 28..695 686..19 3340 100 Minus
GstE6-RA 751 CG17530-RA 32..687 684..29 790 74.9 Minus
GstE7-RA 765 CG17531-RA 65..519 651..197 595 76.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:55:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18404632..18405299 686..19 3340 100 Minus
2R 25286936 2R 18406042..18406697 684..29 790 74.7 Minus
2R 25286936 2R 18406988..18407442 651..197 565 74.9 Minus
2R 25286936 2R 18408004..18408394 540..150 545 76 Minus
2R 25286936 2R 18397155..18397321 374..540 280 77.8 Plus
2R 25286936 2R 18403419..18403502 540..457 210 83.3 Minus
Blast to na_te.dros performed on 2015-02-10 15:55:07 has no hits.

BO18031.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:17:19 Download gff for BO18031.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17527-PA 1..669 18..684 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:08:08 Download gff for BO18031.3prime
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 21..702 11..691 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:40:06 Download gff for BO18031.3prime
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 21..702 11..691 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:40:06 Download gff for BO18031.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 18404625..18405306 11..691 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:08:08 Download gff for BO18031.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14292130..14292811 11..691 98   Minus

BO18031.5prime Sequence

698 bp (698 high quality bases) assembled on 2006-10-13

> BO18031.5prime
GAAGTTATCAGTCGACATGGTCAAGTTAACTCTATATGGTGTGAATCCCA
GTCCACCAGTTCGTGCCGTCAAACTCACTCTGGCTGCCCTCCAGCTGCCC
TATGAGTTTGTAAACGTTAATATTTCGGGTCAGGAGCAGCTTTCTGAGGA
ATATCTAAAAAAGAATCCAGAGCACACGGTGCCAACACTGGAGGATGATG
GTAACTACATTTGGGACTCGCATGCCATTATCGCGTATCTGGTGTCCAAA
TATGCAGATTCGGATGCCCTGTATCCCAGAGATCTGCTCCAGCGAGCTGT
GGTGGATCAACGACTGCACTTCGAGACAGGAGTGGTTTTCGCCAATGGCA
TTAAGGCCATTACCAAGCCGTTATTCTTTAATGGCCTGAACAGGATTCCC
AAGGAACGCTACGATGCCATTGTCGAGATCTATGACTTTGTGGAGACCTT
CCTCGCTGGACATGATTACATTGCTGGGGATCAGTTGACCATTGCCGATT
TTAGCCTGATCTCGTCGATTACCTCGCTGGTGGCGTTCGTGGAGATCGAT
AGGTTGAAATATCCCAGGATCATCGAATGGGTCAGGCGTTTGGAGAAGCT
GCCTTACTACGAGGAGGCCAATGCGAAGGGAGCCCGGGAGTTGGAGACCA
TTCTAAAGTCCACTAATTTCACCTTTGCAACCGCAAGCTTTCTAGACC

BO18031.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:18:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG17527-PA 669 GstE5-RA 1..666 17..682 3330 100 Plus
CG17530-PA 669 GstE6-RA 145..254 161..270 175 86.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:24:25
Subject Length Description Subject Range Query Range Score Percent Strand
GstE5-RA 734 CG17527-RA 28..695 15..682 3340 100 Plus
GstE6-RA 751 CG17530-RA 32..687 17..672 790 74.9 Plus
GstE7-RA 765 CG17531-RA 65..519 50..504 595 76.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:24:16
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18404632..18405299 15..682 3340 100 Plus
2R 25286936 2R 18406042..18406697 17..672 790 74.7 Plus
2R 25286936 2R 18406988..18407442 50..504 565 74.9 Plus
2R 25286936 2R 18408004..18408394 161..551 545 76 Plus
2R 25286936 2R 18397155..18397321 327..161 280 77.8 Minus
2R 25286936 2R 18403419..18403502 161..244 210 83.3 Plus
Blast to na_te.dros performed on 2015-02-10 17:24:21 has no hits.

BO18031.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:17:20 Download gff for BO18031.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17527-PA 1..669 17..683 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:40:50 Download gff for BO18031.5prime
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 21..702 10..690 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:57:01 Download gff for BO18031.5prime
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 21..702 10..690 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:57:01 Download gff for BO18031.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 18404625..18405306 10..690 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:40:50 Download gff for BO18031.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14292130..14292811 10..690 98   Plus

BO18031.complete Sequence

700 bp assembled on 2006-10-11

GenBank Submission: FJ634288

> BO18031.complete
GAAGTTATCAGTCGACATGGTCAAGTTAACTCTATATGGTGTGAATCCCA
GTCCACCAGTTCGTGCCGTCAAACTCACTCTGGCTGCCCTCCAGCTGCCC
TATGAGTTTGTAAACGTTAATATTTCGGGTCAGGAGCAGCTTTCTGAGGA
ATATCTAAAAAAGAATCCAGAGCACACGGTGCCAACACTGGAGGATGATG
GTAACTACATTTGGGACTCGCATGCCATTATCGCGTATCTGGTGTCCAAA
TATGCAGATTCGGATGCCCTGTATCCCAGAGATCTGCTCCAGCGAGCTGT
GGTGGATCAACGACTGCACTTCGAGACAGGAGTGGTTTTCGCCAATGGCA
TTAAGGCCATTACCAAGCCGTTATTCTTTAATGGCCTGAACAGGATTCCC
AAGGAACGCTACGATGCCATTGTCGAGATCTATGACTTTGTGGAGACCTT
CCTCGCTGGACATGATTACATTGCTGGGGATCAGTTGACCATTGCCGATT
TTAGCCTGATCTCGTCGATTACCTCGCTGGTGGCGTTCGTGGAGATCGAT
AGGTTGAAATATCCCAGGATCATCGAATGGGTCAGGCGTTTGGAGAAGCT
GCCTTACTACGAGGAGGCCAATGCGAAGGGAGCCCGGGAGTTGGAGACCA
TTCTAAAGTCCACTAATTTCACCTTTGCAACCGCAAGCTTTCTAGACCAT

BO18031.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:58:39
Subject Length Description Subject Range Query Range Score Percent Strand
GstE5-RA 669 CG17527-PA 1..666 17..682 3330 100 Plus
GstE6-RA 669 CG17530-PA 1..656 17..672 790 74.7 Plus
GstE7-RA 672 CG17531-PA 34..488 50..504 565 74.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:42
Subject Length Description Subject Range Query Range Score Percent Strand
GstE5-RA 734 CG17527-RA 28..695 15..682 3340 100 Plus
GstE6-RA 751 CG17530-RA 32..687 17..672 790 74.7 Plus
GstE7-RA 765 CG17531-RA 65..519 50..504 565 74.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18404632..18405299 15..682 3340 100 Plus
2R 25286936 2R 18406042..18406697 17..672 790 74.7 Plus
2R 25286936 2R 18406988..18407442 50..504 565 74.9 Plus
2R 25286936 2R 18408004..18408394 161..551 545 76 Plus
2R 25286936 2R 18397155..18397321 327..161 280 77.8 Minus
2R 25286936 2R 18403419..18403502 161..244 210 83.3 Plus
Blast to na_te.dros performed on 2014-11-26 15:58:38 has no hits.

BO18031.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:22:01 Download gff for BO18031.complete
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 1..669 17..683 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:41:27 Download gff for BO18031.complete
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 1..669 17..683 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:49:11 Download gff for BO18031.complete
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 30..695 17..684 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:22:01 Download gff for BO18031.complete
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 1..669 17..683 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:20 Download gff for BO18031.complete
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 30..695 17..684 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:20 Download gff for BO18031.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18404634..18405299 17..684 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:49:11 Download gff for BO18031.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14292139..14292804 17..684 99   Plus

BO18031.pep Sequence

Translation from 16 to 700

> BO18031.pep
MVKLTLYGVNPSPPVRAVKLTLAALQLPYEFVNVNISGQEQLSEEYLKKN
PEHTVPTLEDDGNYIWDSHAIIAYLVSKYADSDALYPRDLLQRAVVDQRL
HFETGVVFANGIKAITKPLFFNGLNRIPKERYDAIVEIYDFVETFLAGHD
YIAGDQLTIADFSLISSITSLVAFVEIDRLKYPRIIEWVRRLEKLPYYEE
ANAKGARELETILKSTNFTFATASFLDH

BO18031.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:05:54
Subject Length Description Subject Range Query Range Score Percent Strand
GstE5-PA 222 CG17527-PA 1..222 1..222 1136 100 Plus
GstE6-PA 222 CG17530-PA 1..220 1..220 884 75.5 Plus
GstE8-PB 222 CG17533-PB 1..222 1..222 846 71.2 Plus
GstE8-PA 222 CG17533-PA 1..222 1..222 846 71.2 Plus
GstE7-PA 223 CG17531-PA 1..222 1..222 846 69.8 Plus