Clone Sequence Records
BO18031.3prime Sequence
698 bp (698 high quality bases) assembled on 2006-10-13
> BO18031.3prime
ATGGTCTAGAAAGCTTGCGGTTGCAAAGGTGAAATTAGTGGACTTTAGAA
TGGTCTCCAACTCCCGGGCTCCCTTCGCATTGGCCTCCTCGTAGTAAGGC
AGCTTCTCCAAACGCCTGACCCATTCGATGATCCTGGGATATTTCAACCT
ATCGATCTCCACGAACGCCACCAGCGAGGTAATCGACGAGATCAGGCTAA
AATCGGCAATGGTCAACTGATCCCCAGCAATGTAATCATGTCCAGCGAGG
AAGGTCTCCACAAAGTCATAGATCTCGACAATGGCATCGTAGCGTTCCTT
GGGAATCCTGTTCAGGCCATTAAAGAATAACGGCTTGGTAATGGCCTTAA
TGCCATTGGCGAAAACCACTCCTGTCTCGAAGTGCAGTCGTTGATCCACC
ACAGCTCGCTGGAGCAGATCTCTGGGATACAGGGCATCCGAATCTGCATA
TTTGGACACCAGATACGCGATAATGGCATGCGAGTCCCAAATGTAGTTAC
CATCATCCTCCAGTGTTGGCACCGTGTGCTCTGGATTCTTTTTTAGATAT
TCCTCAGAAAGCTGCTCCTGACCCGAAATATTAACGTTTACAAACTCATA
GGGCAGCTGGAGGGCAGCCAGAGTGAGTTTGACGGCACGAACTGGTGGAC
TGGGATTCACACCATATAGAGTTAACTTGACCATGTCGACTGATAACT
BO18031.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:18:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17527-PA | 669 | GstE5-RA | 1..666 | 684..19 | 3330 | 100 | Minus |
CG17530-PA | 669 | GstE6-RA | 145..254 | 540..431 | 175 | 86.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:55:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE5-RA | 734 | CG17527-RA | 28..695 | 686..19 | 3340 | 100 | Minus |
GstE6-RA | 751 | CG17530-RA | 32..687 | 684..29 | 790 | 74.9 | Minus |
GstE7-RA | 765 | CG17531-RA | 65..519 | 651..197 | 595 | 76.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:55:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18404632..18405299 | 686..19 | 3340 | 100 | Minus |
2R | 25286936 | 2R | 18406042..18406697 | 684..29 | 790 | 74.7 | Minus |
2R | 25286936 | 2R | 18406988..18407442 | 651..197 | 565 | 74.9 | Minus |
2R | 25286936 | 2R | 18408004..18408394 | 540..150 | 545 | 76 | Minus |
2R | 25286936 | 2R | 18397155..18397321 | 374..540 | 280 | 77.8 | Plus |
2R | 25286936 | 2R | 18403419..18403502 | 540..457 | 210 | 83.3 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:55:07 has no hits.
BO18031.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:17:19 Download gff for
BO18031.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17527-PA | 1..669 | 18..684 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:08:08 Download gff for
BO18031.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 21..702 | 11..691 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:40:06 Download gff for
BO18031.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 21..702 | 11..691 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:40:06 Download gff for
BO18031.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18404625..18405306 | 11..691 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:08:08 Download gff for
BO18031.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14292130..14292811 | 11..691 | 98 | | Minus |
BO18031.5prime Sequence
698 bp (698 high quality bases) assembled on 2006-10-13
> BO18031.5prime
GAAGTTATCAGTCGACATGGTCAAGTTAACTCTATATGGTGTGAATCCCA
GTCCACCAGTTCGTGCCGTCAAACTCACTCTGGCTGCCCTCCAGCTGCCC
TATGAGTTTGTAAACGTTAATATTTCGGGTCAGGAGCAGCTTTCTGAGGA
ATATCTAAAAAAGAATCCAGAGCACACGGTGCCAACACTGGAGGATGATG
GTAACTACATTTGGGACTCGCATGCCATTATCGCGTATCTGGTGTCCAAA
TATGCAGATTCGGATGCCCTGTATCCCAGAGATCTGCTCCAGCGAGCTGT
GGTGGATCAACGACTGCACTTCGAGACAGGAGTGGTTTTCGCCAATGGCA
TTAAGGCCATTACCAAGCCGTTATTCTTTAATGGCCTGAACAGGATTCCC
AAGGAACGCTACGATGCCATTGTCGAGATCTATGACTTTGTGGAGACCTT
CCTCGCTGGACATGATTACATTGCTGGGGATCAGTTGACCATTGCCGATT
TTAGCCTGATCTCGTCGATTACCTCGCTGGTGGCGTTCGTGGAGATCGAT
AGGTTGAAATATCCCAGGATCATCGAATGGGTCAGGCGTTTGGAGAAGCT
GCCTTACTACGAGGAGGCCAATGCGAAGGGAGCCCGGGAGTTGGAGACCA
TTCTAAAGTCCACTAATTTCACCTTTGCAACCGCAAGCTTTCTAGACC
BO18031.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:18:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17527-PA | 669 | GstE5-RA | 1..666 | 17..682 | 3330 | 100 | Plus |
CG17530-PA | 669 | GstE6-RA | 145..254 | 161..270 | 175 | 86.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:24:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE5-RA | 734 | CG17527-RA | 28..695 | 15..682 | 3340 | 100 | Plus |
GstE6-RA | 751 | CG17530-RA | 32..687 | 17..672 | 790 | 74.9 | Plus |
GstE7-RA | 765 | CG17531-RA | 65..519 | 50..504 | 595 | 76.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:24:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18404632..18405299 | 15..682 | 3340 | 100 | Plus |
2R | 25286936 | 2R | 18406042..18406697 | 17..672 | 790 | 74.7 | Plus |
2R | 25286936 | 2R | 18406988..18407442 | 50..504 | 565 | 74.9 | Plus |
2R | 25286936 | 2R | 18408004..18408394 | 161..551 | 545 | 76 | Plus |
2R | 25286936 | 2R | 18397155..18397321 | 327..161 | 280 | 77.8 | Minus |
2R | 25286936 | 2R | 18403419..18403502 | 161..244 | 210 | 83.3 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:24:21 has no hits.
BO18031.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:17:20 Download gff for
BO18031.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17527-PA | 1..669 | 17..683 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:40:50 Download gff for
BO18031.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 21..702 | 10..690 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:57:01 Download gff for
BO18031.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 21..702 | 10..690 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:57:01 Download gff for
BO18031.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18404625..18405306 | 10..690 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:40:50 Download gff for
BO18031.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14292130..14292811 | 10..690 | 98 | | Plus |
BO18031.complete Sequence
700 bp assembled on 2006-10-11
GenBank Submission: FJ634288
> BO18031.complete
GAAGTTATCAGTCGACATGGTCAAGTTAACTCTATATGGTGTGAATCCCA
GTCCACCAGTTCGTGCCGTCAAACTCACTCTGGCTGCCCTCCAGCTGCCC
TATGAGTTTGTAAACGTTAATATTTCGGGTCAGGAGCAGCTTTCTGAGGA
ATATCTAAAAAAGAATCCAGAGCACACGGTGCCAACACTGGAGGATGATG
GTAACTACATTTGGGACTCGCATGCCATTATCGCGTATCTGGTGTCCAAA
TATGCAGATTCGGATGCCCTGTATCCCAGAGATCTGCTCCAGCGAGCTGT
GGTGGATCAACGACTGCACTTCGAGACAGGAGTGGTTTTCGCCAATGGCA
TTAAGGCCATTACCAAGCCGTTATTCTTTAATGGCCTGAACAGGATTCCC
AAGGAACGCTACGATGCCATTGTCGAGATCTATGACTTTGTGGAGACCTT
CCTCGCTGGACATGATTACATTGCTGGGGATCAGTTGACCATTGCCGATT
TTAGCCTGATCTCGTCGATTACCTCGCTGGTGGCGTTCGTGGAGATCGAT
AGGTTGAAATATCCCAGGATCATCGAATGGGTCAGGCGTTTGGAGAAGCT
GCCTTACTACGAGGAGGCCAATGCGAAGGGAGCCCGGGAGTTGGAGACCA
TTCTAAAGTCCACTAATTTCACCTTTGCAACCGCAAGCTTTCTAGACCAT
BO18031.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:58:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE5-RA | 669 | CG17527-PA | 1..666 | 17..682 | 3330 | 100 | Plus |
GstE6-RA | 669 | CG17530-PA | 1..656 | 17..672 | 790 | 74.7 | Plus |
GstE7-RA | 672 | CG17531-PA | 34..488 | 50..504 | 565 | 74.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE5-RA | 734 | CG17527-RA | 28..695 | 15..682 | 3340 | 100 | Plus |
GstE6-RA | 751 | CG17530-RA | 32..687 | 17..672 | 790 | 74.7 | Plus |
GstE7-RA | 765 | CG17531-RA | 65..519 | 50..504 | 565 | 74.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18404632..18405299 | 15..682 | 3340 | 100 | Plus |
2R | 25286936 | 2R | 18406042..18406697 | 17..672 | 790 | 74.7 | Plus |
2R | 25286936 | 2R | 18406988..18407442 | 50..504 | 565 | 74.9 | Plus |
2R | 25286936 | 2R | 18408004..18408394 | 161..551 | 545 | 76 | Plus |
2R | 25286936 | 2R | 18397155..18397321 | 327..161 | 280 | 77.8 | Minus |
2R | 25286936 | 2R | 18403419..18403502 | 161..244 | 210 | 83.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:58:38 has no hits.
BO18031.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:22:01 Download gff for
BO18031.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 1..669 | 17..683 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:41:27 Download gff for
BO18031.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 1..669 | 17..683 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:49:11 Download gff for
BO18031.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 30..695 | 17..684 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:22:01 Download gff for
BO18031.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 1..669 | 17..683 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:20 Download gff for
BO18031.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 30..695 | 17..684 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:20 Download gff for
BO18031.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18404634..18405299 | 17..684 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:49:11 Download gff for
BO18031.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14292139..14292804 | 17..684 | 99 | | Plus |
BO18031.pep Sequence
Translation from 16 to 700
> BO18031.pep
MVKLTLYGVNPSPPVRAVKLTLAALQLPYEFVNVNISGQEQLSEEYLKKN
PEHTVPTLEDDGNYIWDSHAIIAYLVSKYADSDALYPRDLLQRAVVDQRL
HFETGVVFANGIKAITKPLFFNGLNRIPKERYDAIVEIYDFVETFLAGHD
YIAGDQLTIADFSLISSITSLVAFVEIDRLKYPRIIEWVRRLEKLPYYEE
ANAKGARELETILKSTNFTFATASFLDH
BO18031.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:05:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE5-PA | 222 | CG17527-PA | 1..222 | 1..222 | 1136 | 100 | Plus |
GstE6-PA | 222 | CG17530-PA | 1..220 | 1..220 | 884 | 75.5 | Plus |
GstE8-PB | 222 | CG17533-PB | 1..222 | 1..222 | 846 | 71.2 | Plus |
GstE8-PA | 222 | CG17533-PA | 1..222 | 1..222 | 846 | 71.2 | Plus |
GstE7-PA | 223 | CG17531-PA | 1..222 | 1..222 | 846 | 69.8 | Plus |