Clone Sequence Records
BO18032.3prime Sequence
689 bp (634 high quality bases) assembled on 2006-10-13
> BO18032.3prime
ATGGTCTAGAAAGCTTGCACTATTAACTAGCTTATAGTACAGGGCAAAAA
CGAGCATGCAGGAGAGTAGAAAAATAAAGTGTAGGTAAATGCCATTGGCG
CAATCCGCAGTCTCCCCATAAGGCACCTGCTGCAGCCTTCCACAAATGAA
ACGAGCCTGAAATGGAGCCATGAATGCGATCAGGATGACGAACACTATGG
CAAGTGCCAGGAGATACCGCATATCATTGATGATCAGGAAGAGTATTAGC
AGGACGATCATGGTGACGGTGAGCAGCAGAAAAATGCAGCAAGTACAGAT
AATGTTGGGTAGCAGAACCTCCGGACTTTTGGCCCCATACAAATGCAGCA
GGGCCAGCAGGGATCCGGCAACCAAAATGGCAATCAAAAGGACCCAGACG
CGCACTAGATGCATATAATACGCTCCGAACAGGGTGAGAAAGAACAAGGA
TCCCAGCACCAATCCCCAGCATAACAAGGTCAATGCTGGAGTCTGTGCGA
TGCAGCCGAGCACTGAGAGAATGATGAAAGCTAATATCAGCCAAACGAAC
GGCGGCACTGGAATTGCCTTGTAGACCCTCACAGCGAGTGCCGACAGTAT
GATCCACGAAATGGAAGACAGCAGGCACAGCACTACGGAGGATAGGTACA
CCCGGAAGATGAAGGCCCGCAACTCCCGCTCGTTGATGA
BO18032.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:18:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32988-PA | 768 | CG32988-RA | 95..765 | 689..19 | 3355 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:04:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32988-RA | 829 | CG32988-RA | 135..805 | 689..19 | 3355 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:03:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8864998..8865668 | 689..19 | 3355 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:03:58 has no hits.
BO18032.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:17:20 Download gff for
BO18032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-PA | 96..768 | 16..688 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:43:38 Download gff for
BO18032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 136..809 | 15..688 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:17:29 Download gff for
BO18032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 136..809 | 15..688 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:17:29 Download gff for
BO18032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8864999..8865672 | 15..688 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:43:38 Download gff for
BO18032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8864999..8865672 | 15..688 | 99 | | Minus |
BO18032.5prime Sequence
737 bp (729 high quality bases) assembled on 2006-10-13
> BO18032.5prime
GAAGTTATCAGTCGACATGAATAATCGCAATCGGGGTTGGGGTCGTTATG
GCCTTAGAACCGGAAGACCTGGTGGCGAGCCAGTTCCTGCGGAGGGACCG
GAGGTCTTAGTCATCAACGAGCGGGAGTTGCGGGCCTTCATCTTCCGGGT
GTACCTATCCTCCGTAGTGCTGTGCCTGCTGTCTTCCATTTCGTGGATCA
TACTGTCGGCACTCGCTGTGAGGGTCTACAAGGCAATTCCAGTGCCGCCG
TTCGTTTGGCTGATATTAGCTTTCATCATTCTCTCAGTGCTCGGCTGCAT
CGCACAGACTCCAGCATTGACCTTGTTATGCTGGGGATTGGTGCTGGGAT
CCTTGTTCTTTCTCACCCTGTTCGGAGCGTATTATATGCATCTAGTGCGC
GTCTGGGTCCTTTTGATTGCCATTTTGGTTGCCGGATCCCTGCTGGCCCT
GCTGCATTTGTATGGGGCCAAAAGTCCGGAGGTTCTGCTACCCAACATTA
TCTGTACTTGCTGCATTTTTCTGCTGCTCACCGTCACCATGATCGTCCTG
CTAATACTCTTCCTGATCATCAATGATATGCGGTATCTCCTGGCACTTGC
CATAGTGTTCGTCATCCTGATCGCATTCATGGCTCCATTTCAGGCTCGTT
TCATTTGTGGAAGGCTGCAGCAGGTGCCTTATGGGGAGACTGCGGATTGC
GCCAATGGCATTTACCTACACTTTATTTTTCTACTCT
BO18032.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:18:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32988-PA | 768 | CG32988-RA | 1..721 | 17..737 | 3605 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:18:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32988-RA | 829 | CG32988-RA | 39..761 | 15..737 | 3615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:18:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8864902..8865624 | 15..737 | 3615 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:18:53 has no hits.
BO18032.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:17:21 Download gff for
BO18032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-PA | 1..721 | 17..737 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:05:15 Download gff for
BO18032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 33..761 | 7..737 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:40:28 Download gff for
BO18032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 33..761 | 7..737 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:40:28 Download gff for
BO18032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8864896..8865624 | 7..737 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:05:15 Download gff for
BO18032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8864896..8865624 | 7..737 | 99 | | Plus |
BO18032.complete Sequence
799 bp assembled on 2006-10-11
GenBank Submission: FJ634289
> BO18032.complete
GAAGTTATCAGTCGACATGAATAATCGCAATCGGGGTTGGGGTCGTTATG
GCCTTAGAACCGGAAGACCTGGTGGCGAGCCAGTTCCTGCGGAGGGACCG
GAGGTCTTAGTCATCAACGAGCGGGAGTTGCGGGCCTTCATCTTCCGGGT
GTACCTATCCTCCGTAGTGCTGTGCCTGCTGTCTTCCATTTCGTGGATCA
TACTGTCGGCACTCGCTGTGAGGGTCTACAAGGCAATTCCAGTGCCGCCG
TTCGTTTGGCTGATATTAGCTTTCATCATTCTCTCAGTGCTCGGCTGCAT
CGCACAGACTCCAGCATTGACCTTGTTATGCTGGGGATTGGTGCTGGGAT
CCTTGTTCTTTCTCACCCTGTTCGGAGCGTATTATATGCATCTAGTGCGC
GTCTGGGTCCTTTTGATTGCCATTTTGGTTGCCGGATCCCTGCTGGCCCT
GCTGCATTTGTATGGGGCCAAAAGTCCGGAGGTTCTGCTACCCAACATTA
TCTGTACTTGCTGCATTTTTCTGCTGCTCACCGTCACCATGATCGTCCTG
CTAATACTCTTCCTGATCATCAATGATATGCGGTATCTCCTGGCACTTGC
CATAGTGTTCGTCATCCTGATCGCATTCATGGCTCCATTTCAGGCTCGTT
TCATTTGTGGAAGGCTGCAGCAGGTGCCTTATGGGGAGACTGCGGATTGC
GCCAATGGCATTTACCTACACTTTATTTTTCTACTCTCCTGCATGCTCGT
TTTTGCCCTGTACTATAAGCTAGTTAATAGTGCAAGCTTTCTAGACCAT
BO18032.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:41:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32988-RA | 768 | CG32988-PA | 1..765 | 17..781 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:41:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32988-RA | 829 | CG32988-RA | 39..805 | 15..781 | 3835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:41:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8864902..8865668 | 15..781 | 3835 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:41:15 has no hits.
BO18032.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:22:03 Download gff for
BO18032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 1..768 | 17..784 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:41:28 Download gff for
BO18032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 1..768 | 17..784 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:22:08 Download gff for
BO18032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 41..805 | 17..783 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:22:03 Download gff for
BO18032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 1..768 | 17..784 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:53:38 Download gff for
BO18032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 41..805 | 17..783 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:53:38 Download gff for
BO18032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8864904..8865668 | 17..783 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:22:08 Download gff for
BO18032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8864904..8865668 | 17..783 | 99 | | Plus |
BO18032.pep Sequence
Translation from 16 to 799
> BO18032.pep
MNNRNRGWGRYGLRTGRPGGEPVPAEGPEVLVINERELRAFIFRVYLSSV
VLCLLSSISWIILSALAVRVYKAIPVPPFVWLILAFIILSVLGCIAQTPA
LTLLCWGLVLGSLFFLTLFGAYYMHLVRVWVLLIAILVAGSLLALLHLYG
AKSPEVLLPNIICTCCIFLLLTVTMIVLLILFLIINDMRYLLALAIVFVI
LIAFMAPFQARFICGRLQQVPYGETADCANGIYLHFIFLLSCMLVFALYY
KLVNSASFLDH
BO18032.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:05:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32988-PA | 255 | CG32988-PA | 1..255 | 1..255 | 1306 | 100 | Plus |
| CG32983-PA | 250 | CG32983-PA | 22..227 | 41..247 | 281 | 31.4 | Plus |
| CG32987-PA | 257 | CG32987-PA | 23..233 | 41..248 | 204 | 22.3 | Plus |
