Clone Sequence Records
BO18057.3prime Sequence
817 bp (683 high quality bases) assembled on 2006-10-13
> BO18057.3prime
ATGGTCTAGAAAGCTTGCATACATCAGACACTTGTTTGGGGGATTCATCT
TGGACGAGTTGCTGCACTGGAATGCCTCGGCGAAGGCTGGGCTGTTGATC
ATCATGGCGAATACCCTGGCCTCATATGGCGGATGGAAATTGTTTCGGAC
GAAGTTCGCTCGTCTTTCTGGATAGATATCCGAGCACATGAACTGAGCCG
CGCTGAGGAAGAAAAGCTGTTCCGGCGACTGCGTCATGTGCGGCAGGCTT
TCCGTTTCCTCCATCTCTACTTGATCCAACCATTTCCAGTACGCCGACTG
CGCAATGCGAATACCCACATTGTCCGCTATACTCTCAGCTTGCGACTTCA
ATCTTCGCAATCGCAAGTTGCCGTACAGCATCCCACTGAACTGGTCCGCC
AGGCAATTTTTGACCAGCTCAAAACCCACCTTGGTCTGGGTGCTCCAGTT
GTCGTTGAGGTTTCCCCTGCTGTCGTAGAGCCGGTTCAGATCATCGAATC
CGTGGGCCATCTCGTGAGCCATGGTGAAACCCAGAGTGCCGTACTTAAGA
GCTGCCGGATAAATATCGTCCCAAAGATAGCGATGCTGCATATAGCTGAC
CGGTAGCACCACCAGATTTGTTTCCGTCTCATAGATAGGAGTCGCGGTTA
CACCGTGGTAGTAGTATACGCTGCTGGACTCCCGCAAAAGATCCGTGCGG
AGAATTCTGGCCTTTACCTCCAGCAAGCGTTGGATATTGCCTTAATAATC
GGCGGAGCTGAACACCAGATCGCCGAACTGCTCCTCGAAATTGACCGCCT
GACCGCCGGCTATCTCG
BO18057.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 18:48:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14529-PA | 2046 | CG14529-RA | 1245..2043 | 817..19 | 3895 | 99.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:56:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14529-RA | 2127 | CG14529-RA | 1255..2053 | 817..19 | 3935 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:56:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28874159..28874957 | 817..19 | 3935 | 99.5 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:56:23 has no hits.
BO18057.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:17:39 Download gff for
BO18057.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-PA | 1245..2046 | 16..817 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 07:26:00 Download gff for
BO18057.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-RA | 1255..2063 | 9..817 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:38:24 Download gff for
BO18057.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-RA | 1255..2063 | 9..817 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:38:24 Download gff for
BO18057.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28874159..28874967 | 9..817 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 07:26:00 Download gff for
BO18057.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24699881..24700689 | 9..817 | 99 | | Minus |
BO18057.5prime Sequence
829 bp (760 high quality bases) assembled on 2006-10-13
> BO18057.5prime
GAAGTTATCAGTCGACATGGAACGCCTCCCAGCTTCCGCCTGCCTAATCT
TTGTCACCTTGGCCGTCGGTTCATTGGCCATCCAGGGTGGAGTCTTCAAG
GAGCTAACCACGCCTCTGGGTCAGCAGATCATGCGTATAGCCAAGTCGGC
GGAGATGTGCTCCTTTATGGACACCTCTGTGAGTCCCTGCGACGATTTCT
ATGGCTATGCCTGCGGGAATTATGCGACAATAAATGCGGCAACCTCGCAG
AAAGACACCAATATCCGGCAGCTTATGTTTGCCAACTATCTGCGTCGGGT
GAGGCAGGTGCTTAACGAGCCCCGGATAAGTACAGATCGGCCGATGGAGG
TGCGCGTGAAGTATTTCTACGAATCCTGCCTGGACACAGCGGCTTTAAGG
ACTAAACAGCGATCCCATCTGCTCAGTGTTCTAAGGGAGTTTGGTGGAAT
GCCGGCGGTGGAGGGCAAGTCCTGGGACTACGTCGGTTTCGACGCCATTG
AAATGATGGCTCAGTTGCTCCGCCGCTACGGAAAGTTGACTCTACTGGGT
GTCTATGTGGTTCCGGATCACTTCAACTCCCAGATTAAACGCCTACAGTT
GGGCCAAAGGCTCGATCTCGCTGAGAGCGATGAGTTTGCCAGTCTGTGGA
AGAAGTATGCGCTGAAGATGCGTCTGCGGAACCTCCTGNGTCTGTCGGAG
GAGCTAGCTAGAAAGACTGCTGAGGAGATAATAGAGCTGGAGTTGGAACT
ATCGCGCAGTGCTTTTGACCATAGAATGAACCGTGATCCGCGACTGATGC
GCCCTCTGAACATGCTGTCCAACATGAAC
BO18057.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 18:48:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14529-PA | 2046 | CG14529-RA | 1..811 | 17..827 | 3986 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:37:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14529-RA | 2127 | CG14529-RA | 11..821 | 17..827 | 4014 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:37:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28872915..28873725 | 17..827 | 4014 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-13 13:37:09 has no hits.
BO18057.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:17:39 Download gff for
BO18057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-PA | 1..813 | 17..829 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:46:08 Download gff for
BO18057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-RA | 2..823 | 12..829 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:01:03 Download gff for
BO18057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-RA | 2..823 | 12..829 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:01:03 Download gff for
BO18057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28872909..28873727 | 11..829 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:46:08 Download gff for
BO18057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24698631..24699449 | 11..829 | 99 | | Plus |
BO18057.complete Sequence
2077 bp assembled on 2007-03-23
GenBank Submission: FJ634301
> BO18057.complete
GAAGTTATCAGTCGACATGGAACGCCTCCCAGCTTCCGCCTGCCTAATCT
TTGTCACCTTGGCCGTCGGTTCATTGGCCATCCAGGGTGGAGTCTTCAAG
GAGCTAACCACGCCTCTGGGTCAGCAGATCATGCGTATAGCCAAGTCGGC
GGAGATGTGCTCCTTTATGGACACCTCTGTGAGTCCCTGCGACGATTTCT
ATGGCTATGCCTGCGGGAATTATGCGACAATAAATGCGGCAACCTCGCAG
AAAGACACCAATATCCGGCAGCTTATGTTTGCCAACTATCTGCGTCGGGT
GAGGCAGGTGCTTAACGAGCCCCGGATAAGTACAGATCGGCCGATGGAGG
TGCGCGTGAAGTATTTCTACGAATCCTGCCTGGACACAGCGGCTTTAAGG
ACTAAACAGCGATCCCATCTGCTCAGTGTTCTAAGGGAGTTTGGTGGAAT
GCCGGCGGTGGAGGGCAAGTCCTGGGACTACGTCGGTTTCGACGCCATTG
AAATGATGGCTCAGTTGCTCCGCCGCTACGGAAAGTTGACTCTACTGGGT
GTCTATGTGGTTCCGGATCACTTCAACTCCCAGATTAAACGCCTACAGTT
GGGCCAAAGGCTCGATCTCGCTGAGAGCGATGAGTTTGCCAGTCTGTGGA
AGAAGTATGCGCTGAAGATGCGTCTGCGGAACCTCCTGGGTCTGTCGGAG
GAGCTAGCTAGAAAGACTGCTGAGGAGATAATAGAGCTGGAGTTGGAACT
ATCGCGCAGTGCTTTTGACCATAGAATGAACCGTGATCCGCGACTGATGC
GCCATCTGACCATGCTGTCCAACATGAGCGATGCTTACGGACCGATTCTT
AACGTGACTCGCTTTGTGACCTCCTGGTTGGGTTCCGAATACAATCTTCC
GGTTTTTGAATCAGTTCCTAGCTACCTTTTCCAGGTAAAGAAGATCCTGC
TGAGCACTCCCAACCATGTGGTGGCCAACTATATGCTGTCCAGTCTGTTG
ACCGACTTTGAGATCACGGCGAATGAAGAGCAACAGAAAGTGATCTGTCA
CGAGCGGATCACCGAGCTTTTTCCCGATGTGGTGGACCATATGGTGTACC
ACTCATTAGAGCAGCAAAATCCCTACATAGCCAACGAGATGAGGAGTCTG
TGGGTGGAGCTGAAGTCCTCCTTCCGCGAAATGCTCAGTTCCCCGGACAT
CGAATGGCTGGAGAAGCAGACACGTGAGGAGTTACTGGAAAAACTCAATG
GTATGTCCTTCGAGATAGCCGGCGGTCAGGCGGTCAACTTCGAGGAGCAG
TTCGGCGATCTGGTGGTCAGCTCCGCCGATTATTATGGCAATATCCAACG
CCTGCTGGAGGTAAAGGCCAGAATTCTCCGCACGGATCTTTTGCGGGAGT
CCAGCAGCGTATACTACTACCACGGTGTAACCGCGACTCCTATCTATGAG
ACGGAAACAAATCTGGTGGTGCTACCGGTCAGCTATATGCAGCATCGCTA
TCTTTGGGACGATATTTATCCGGCAGCTCTTAAGTACGGCACTCTGGGTT
TCACCATGGCTCACGAGATGGCCCACGGATTCGATGATCTGAACCGGCTC
TACGACAGCAGGGGAAACCTCAACGACAACTGGAGCACCCAGACCAAGGT
GGGTTTTGAGCTGGTCAAAAATTGCCTGGCGGACCAGTTCAGTGGGATGC
TGTACGGCAACTTGCGATTGCGAAGATTGAAGTCGCAAGCTGAGAGTATA
GCGGACAATGTGGGTATTCGCATTGCGCAGTCGGCGTACTGGAAATGGTT
GGATCAAGTAGAGATGGAGGAAACGGAAAGCCTGCCGCACATGACGCAGT
CGCCGGAACAGCTTTTCTTCCTCAGCGCGGCTCAGTTCATGTGCTCGGAT
ATCTATCCAGAAAGACGAGCGAACTTCGTCCGAAACAATTTCCATCCGCC
ATATGAGGCCAGGGTATTCGCCATGATGATCAACAGCCCAGCCTTCGCCG
AGGCATTCCAGTGCAGCAACTCGTCCAAGATGAATCCCCCAAACAAGTGT
CTGATGTATGCAAGCTTTCTAGACCAT
BO18057.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:40:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14529-RA | 2046 | CG14529-PA | 1..2043 | 17..2059 | 10215 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14529-RA | 2127 | CG14529-RA | 11..2053 | 17..2059 | 10215 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:40:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28872915..28874957 | 17..2059 | 10215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:40:58 has no hits.
BO18057.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:09:46 Download gff for
BO18057.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-RA | 1..2046 | 17..2062 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:26:58 Download gff for
BO18057.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-RA | 1..2046 | 17..2062 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:07:02 Download gff for
BO18057.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-RA | 11..2053 | 17..2061 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:09:46 Download gff for
BO18057.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-RA | 1..2046 | 17..2062 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:24:56 Download gff for
BO18057.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-RA | 11..2053 | 17..2061 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:24:56 Download gff for
BO18057.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28872915..28874957 | 17..2061 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:07:02 Download gff for
BO18057.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24698637..24700679 | 17..2061 | 99 | | Plus |
BO18057.pep Sequence
Translation from 16 to 2077
> BO18057.pep
MERLPASACLIFVTLAVGSLAIQGGVFKELTTPLGQQIMRIAKSAEMCSF
MDTSVSPCDDFYGYACGNYATINAATSQKDTNIRQLMFANYLRRVRQVLN
EPRISTDRPMEVRVKYFYESCLDTAALRTKQRSHLLSVLREFGGMPAVEG
KSWDYVGFDAIEMMAQLLRRYGKLTLLGVYVVPDHFNSQIKRLQLGQRLD
LAESDEFASLWKKYALKMRLRNLLGLSEELARKTAEEIIELELELSRSAF
DHRMNRDPRLMRHLTMLSNMSDAYGPILNVTRFVTSWLGSEYNLPVFESV
PSYLFQVKKILLSTPNHVVANYMLSSLLTDFEITANEEQQKVICHERITE
LFPDVVDHMVYHSLEQQNPYIANEMRSLWVELKSSFREMLSSPDIEWLEK
QTREELLEKLNGMSFEIAGGQAVNFEEQFGDLVVSSADYYGNIQRLLEVK
ARILRTDLLRESSSVYYYHGVTATPIYETETNLVVLPVSYMQHRYLWDDI
YPAALKYGTLGFTMAHEMAHGFDDLNRLYDSRGNLNDNWSTQTKVGFELV
KNCLADQFSGMLYGNLRLRRLKSQAESIADNVGIRIAQSAYWKWLDQVEM
EETESLPHMTQSPEQLFFLSAAQFMCSDIYPERRANFVRNNFHPPYEARV
FAMMINSPAFAEAFQCSNSSKMNPPNKCLMYASFLDH
BO18057.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:43:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14529-PA | 681 | CG14529-PA | 1..681 | 1..681 | 3534 | 100 | Plus |
| CG14527-PA | 700 | CG14527-PA | 33..700 | 32..681 | 969 | 31.5 | Plus |
| CG14526-PC | 707 | CG14526-PC | 40..707 | 32..681 | 960 | 31.9 | Plus |
| CG14528-PA | 682 | CG14528-PA | 32..682 | 29..681 | 865 | 31.7 | Plus |
| CG14523-PA | 671 | CG14523-PA | 54..671 | 36..686 | 751 | 30.1 | Plus |
