Clone Sequence Records
BO18061.3prime Sequence
682 bp (462 high quality bases) assembled on 2006-10-13
> BO18061.3prime
ATGGTCTAGAAAGCTTGCCGCATTTATGCGGCCGTTGAGGAAAAGCTCCA
TCATCGGCCAGATCTCCTTTGTCTGTTTTCCCTTGAAAGTGGCAACCAGA
CCCTTCTTTTCGTACCAGGCTATTACCGGGCTCATCACCTCATCGTAGAG
CTCCAGTCGCTTGGCCACCACATGGGGTTTATCATCTTCGCGTTGCATCA
GCGGCTCCCCCGTCACATCATCTTTGCCAGGCACTTTGGGATTCTTGAAG
CCAATATTGTACACCCTGCCGGAGGGCGCATGGATCCAGCGATTCTTGAC
CCGGTCGATAATCACACTATGTGGAACGTCCAGCGTGATCACGGCATCGA
TTTGCTCGCGTGCAGCCAGTGCCTCGGCCTGGGCTATATTGCGCGGGAAT
CCGTCTAGGATGTACGACCTGTTGCCTACCTCGGTTATCCGGGCCAGCAT
CGTCTTGGTCACAATCGCGTCGGGCACCAGTTTACCTTCAGCAATGTACT
GCTTGGCCTTTTTTCCAAGTTCTGTGTTTTTTATGATGTTCTGGCGCAGA
ATGTCCCCCCGTGGAGATGTGCACACATCCATGGTTCTTGCAGATCAATT
CCGAAAATAGTTCCTTTGCCCGAGCCGGGGCTCCGATTATCACAGCGCGA
AAGATTTTTCCATAACATGTCGACTGATAACT
BO18061.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:18:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6612-PB | 651 | Adk3-RB | 108..648 | 559..19 | 2680 | 99.8 | Minus |
CG6612-PA | 651 | Adk3-RA | 108..648 | 559..19 | 2680 | 99.8 | Minus |
CG6612-PB | 651 | Adk3-RB | 62..112 | 606..556 | 255 | 100 | Minus |
CG6612-PA | 651 | Adk3-RA | 62..112 | 606..556 | 255 | 100 | Minus |
CG6612-PB | 651 | Adk3-RB | 10..41 | 658..627 | 160 | 100 | Minus |
CG6612-PA | 651 | Adk3-RA | 10..41 | 658..627 | 160 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:34:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adk3-RD | 1215 | CG6612-RD | 259..897 | 658..19 | 3115 | 99.4 | Minus |
Adk3-RC | 1515 | CG6612-RC | 559..1197 | 658..19 | 3115 | 99.4 | Minus |
Adk3-RA | 1301 | CG6612-RA | 566..1204 | 658..19 | 3115 | 99.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:34:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10887663..10888301 | 19..658 | 3040 | 99.4 | Plus |
Blast to na_te.dros performed on 2015-02-03 06:34:40 has no hits.
BO18061.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:17:42 Download gff for
BO18061.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6612-PA | 1..651 | 15..668 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:29:09 Download gff for
BO18061.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk3-RA | 554..1207 | 15..671 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:37:35 Download gff for
BO18061.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk3-RA | 554..1207 | 15..671 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:37:35 Download gff for
BO18061.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10887660..10888313 | 15..671 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:29:09 Download gff for
BO18061.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6713382..6714035 | 15..671 | 98 | | Plus |
BO18061.5prime Sequence
681 bp (674 high quality bases) assembled on 2006-10-13
> BO18061.5prime
GAAGTTATCAGTCGACATGTTTACGAAAATCTTTCGCGCTGTGATAATCG
GAGCCCCCGGCTCGGGCAAAGGAACTATTTCGGAATTGATCTGCAAGAAC
CATGGATGTGTGCACATCTCCACGGGGGACATTCTGCGCCAGAACATCAT
AAAAAACACAGAACTTGGAAAAAAGGCCAAGCAGTACATTGCTGAAGGTA
AACTGGTGCCCGACGCGATTGTGACCAAGACGATGCTGGCCCGGATAACC
GAGGTAGGCAACAGGTCGTACATCCTAGACGGATTCCCGCGCAATATAGC
CCAGGCCGAGGCACTGGCTGCACGCGAGCAAATCGATGCCGTGATCACGC
TGGACGTTCCACATAGTGTGATTATCGACCGGGTCAAGAATCGCTGGATC
CATGCGCCCTCCGGCAGGGTGTACAATATTGGCTTCAAGAATCCCAAAGT
GCCTGGCAAAGATGATGTGACGGGGGAGCCGCTGATGCAACGCGAAGATG
ATAAACCCCATGTGGTGGCCAAGCGACTGGAGCTCTACGATGAGGTGATG
AAGCCCGGAAATAGCCTGGTACGAAAAGAAGGGTCTGGTTGCCACTTTCA
AGGGAAAACAGACAAAGGAGATCTGGCCGATGATGGAGCTTTTCCTCAAC
GACCGCATAAATGCGGGCAGCTTTCCAAACC
BO18061.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:18:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6612-PB | 651 | Adk3-RB | 1..535 | 17..551 | 2675 | 100 | Plus |
CG6612-PA | 651 | Adk3-RA | 1..535 | 17..551 | 2675 | 100 | Plus |
CG6612-PB | 651 | Adk3-RB | 535..648 | 552..665 | 545 | 99.1 | Plus |
CG6612-PA | 651 | Adk3-RA | 535..648 | 552..665 | 545 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:14:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adk3-RD | 1215 | CG6612-RD | 247..897 | 14..665 | 3220 | 99.7 | Plus |
Adk3-RC | 1515 | CG6612-RC | 547..1197 | 14..665 | 3220 | 99.7 | Plus |
Adk3-RA | 1301 | CG6612-RA | 554..1204 | 14..665 | 3220 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:14:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10887663..10888313 | 665..14 | 3195 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-06 10:14:33 has no hits.
BO18061.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:17:42 Download gff for
BO18061.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6612-PA | 1..651 | 17..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:39:24 Download gff for
BO18061.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk3-RA | 554..1204 | 14..665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:24:51 Download gff for
BO18061.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk3-RA | 554..1204 | 14..665 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:24:51 Download gff for
BO18061.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10887663..10888313 | 14..665 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:39:24 Download gff for
BO18061.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6713385..6714035 | 14..665 | 99 | | Minus |
BO18061.complete Sequence
682 bp assembled on 2006-10-11
GenBank Submission: FJ634303
> BO18061.complete
GAAGTTATCAGTCGACATGTTTACGAAAATCTTTCGCGCTGTGATAATCG
GAGCCCCCGGCTCGGGCAAAGGAACTATTTCGGAATTGATCTGCAAGAAC
CATGGATGTGTGCACATCTCCACGGGGGACATTCTGCGCCAGAACATCAT
AAAAAACACAGAACTTGGAAAAAAGGCCAAGCAGTACATTGCTGAAGGTA
AACTGGTGCCCGACGCGATTGTGACCAAGACGATGCTGGCCCGGATAACC
GAGGTAGGCAACAGGTCGTACATCCTAGACGGATTCCCGCGCAATATAGC
CCAGGCCGAGGCACTGGCTGCACGCGAGCAAATCGATGCCGTGATCACGC
TGGACGTTCCACATAGTGTGATTATCGACCGGGTCAAGAATCGCTGGATC
CATGCGCCCTCCGGCAGGGTGTACAATATTGGCTTCAAGAATCCCAAAGT
GCCTGGCAAAGATGATGTGACGGGGGAGCCGCTGATGCAACGCGAAGATG
ATAAACCCCATGTGGTGGCCAAGCGACTGGAGCTCTACGATGAGGTGATG
AGCCCGGTAATAGCCTGGTACGAAAAGAAGGGTCTGGTTGCCACTTTCAA
GGGAAAACAGACAAAGGAGATCTGGCCGATGATGGAGCTTTTCCTCAACG
ACCGCATAAATGCGGCAAGCTTTCTAGACCAT
BO18061.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:41:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adk3-RD | 651 | CG6612-PD | 1..648 | 17..664 | 3240 | 100 | Plus |
Adk3-RC | 651 | CG6612-PC | 1..648 | 17..664 | 3240 | 100 | Plus |
Adk3-RA | 651 | CG6612-PA | 1..648 | 17..664 | 3240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:41:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adk3-RD | 1215 | CG6612-RD | 247..897 | 14..664 | 3255 | 100 | Plus |
Adk3-RC | 1515 | CG6612-RC | 547..1197 | 14..664 | 3255 | 100 | Plus |
Adk3-RA | 1301 | CG6612-RA | 554..1204 | 14..664 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:41:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10887663..10888313 | 664..14 | 3255 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:41:11 has no hits.
BO18061.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:21:56 Download gff for
BO18061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk3-RA | 1..651 | 17..668 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:41:20 Download gff for
BO18061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk3-RA | 79..732 | 14..668 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:20:25 Download gff for
BO18061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk3-RA | 563..1204 | 23..666 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:21:56 Download gff for
BO18061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk3-RA | 79..732 | 14..668 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:15:13 Download gff for
BO18061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk3-RA | 563..1204 | 23..666 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:15:13 Download gff for
BO18061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10887661..10888304 | 23..666 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:20:25 Download gff for
BO18061.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6713383..6714026 | 23..666 | 99 | | Minus |
BO18061.pep Sequence
Translation from 16 to 682
> BO18061.pep
MFTKIFRAVIIGAPGSGKGTISELICKNHGCVHISTGDILRQNIIKNTEL
GKKAKQYIAEGKLVPDAIVTKTMLARITEVGNRSYILDGFPRNIAQAEAL
AAREQIDAVITLDVPHSVIIDRVKNRWIHAPSGRVYNIGFKNPKVPGKDD
VTGEPLMQREDDKPHVVAKRLELYDEVMSPVIAWYEKKGLVATFKGKQTK
EIWPMMELFLNDRINAASFLDH
BO18061.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:06:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adk3-PD | 216 | CG6612-PD | 1..216 | 1..216 | 1119 | 100 | Plus |
Adk3-PC | 216 | CG6612-PC | 1..216 | 1..216 | 1119 | 100 | Plus |
Adk3-PA | 216 | CG6612-PA | 1..216 | 1..216 | 1119 | 100 | Plus |
Adk3-PB | 216 | CG6612-PB | 1..216 | 1..216 | 1119 | 100 | Plus |
Adk2-PA | 240 | CG3140-PA | 21..209 | 8..190 | 345 | 39.2 | Plus |