Clone Sequence Records
BO18074.3prime Sequence
710 bp (703 high quality bases) assembled on 2006-10-13
> BO18074.3prime
ATGGTCTAGAAAGCTTGCGTTCGAGCAGAGCTGGCGGTACCAGCTTTTGC
TCTCCCTGCACTTTGGATTGGAGCACATGGGACAACGCATGAGGAACTTG
GGGTTGACTGCCTGCTGGGACTTCAGGTGGTCTGCCACAACGTTTGTCAG
GGCGTCGATGAACAGCGGGTGGTCGTTGGGGGTTGCAGCTCGACGGATTT
CCTCTACGCCTACCTCCTTGGCCAGTTCGTCGCAGTACTCGATGTCGAGC
TCATGCAGCGTCTCGATGTGCTCGTTCACGAAGGCAATGGGCACAAGGAT
GAAGTTCTTCAGGCCTTGCTTAACATAGCCCTTAATGGCATCATCAGTTG
CGGGCGCCAGCCAGGGTAGCGGGCCCACCTTGGATTGCCATGCCAGGCTG
TAGGGATTCGTCTGACCAAGTTCCTGCATCACCATGTGTACGCTAGCACC
AATCTCCGAGGGATACGCGTCACCCCGGTTCACAGCCTTAAGGGGAAGGG
AGTGGGCAGTGAAGAGGATGACCACATCATTTCGTTTCGTTTCCACAAAT
TTGGCCAGCTCGTCGCGAATTCGCTGGGCAAACGTTTTGATTAGAAGTGG
ATGAGTGCCCCACCTGTCGATAATGCTCCATTTGATATCCGAGGGCAGAT
TACTAAAGAGGTAGAGGGGATCAAATAAATAGCTGCAATTGTGCATGTCG
ACTGAAAACT
BO18074.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:18:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2098-PB | 681 | ferrochelatase-RB | 1..678 | 696..19 | 3390 | 100 | Minus |
CG2098-PA | 1155 | ferrochelatase-RA | 519..1152 | 652..19 | 3170 | 100 | Minus |
CG2098-PC | 846 | ferrochelatase-RC | 519..841 | 652..330 | 1615 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:42:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FeCH-RB | 1338 | CG2098-RB | 492..1169 | 696..19 | 3390 | 100 | Minus |
FeCH-RA | 1407 | CG2098-RA | 605..1238 | 652..19 | 3170 | 100 | Minus |
FeCH-RC | 1466 | CG2098-RC | 605..927 | 652..330 | 1615 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:42:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31810999..31811365 | 330..696 | 1835 | 100 | Plus |
3R | 32079331 | 3R | 31810629..31810942 | 19..332 | 1570 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 17:42:35 has no hits.
BO18074.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:17:57 Download gff for
BO18074.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2098-PB | 1..681 | 15..696 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:40:40 Download gff for
BO18074.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RB | 489..1174 | 13..699 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:54:17 Download gff for
BO18074.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RB | 489..1174 | 13..699 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:54:17 Download gff for
BO18074.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31810624..31810940 | 13..330 | 99 | <- | Plus |
3R | 31811000..31811368 | 331..699 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:40:40 Download gff for
BO18074.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27636346..27636662 | 13..330 | 99 | <- | Plus |
arm_3R | 27636722..27637090 | 331..699 | 99 | | Plus |
BO18074.5prime Sequence
710 bp (710 high quality bases) assembled on 2006-10-13
> BO18074.5prime
GAAGTTATCAGTCGACATGCACAATTGCAGCTATTTATTTGATCCCCTCT
ACCTCTTTAGTAATCTGCCCTCGGATATCAAATGGAGCATTATCGACAGG
TGGGGCACTCATCCACTTCTAATCAAAACGTTTGCCCAGCGAATTCGCGA
CGAGCTGGCCAAATTTGTGGAAACGAAACGAAATGATGTGGTCATCCTCT
TCACTGCCCACTCCCTTCCCCTTAAGGCTGTGAACCGGGGTGACGCGTAT
CCCTCGGAGATTGGTGCTAGCGTACACATGGTGATGCAGGAACTTGGTCA
GACGAATCCCTACAGCCTGGCATGGCAATCCAAGGTGGGCCCGCTACCCT
GGCTGGCGCCCGCAACTGATGATGCCATTAAGGGCTATGTTAAGCAAGGC
CTGAAGAACTTCATCCTTGTGCCCATTGCCTTCGTGAACGAGCACATCGA
GACGCTGCATGAGCTCGACATCGAGTACTGCGACGAACTGGCCAAGGAGG
TAGGCGTAGAGGAAATCCGTCGAGCTGCAACCCCCAACGACCACCCGCTG
TTCATCGACGCCCTGACAAACGTTGTGGCAGACCACCTGAAGTCCCAGCA
GGCAGTCAACCCCAAGTTCCTCATGCGTTGTCCCATGTGCTCCAATCCAA
AGTGCAGGGAGAGCAAAAGCTGGTACCGCCAGCTCTGCTCGAACGCAAGC
TTTCTAGACC
BO18074.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:18:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2098-PB | 681 | ferrochelatase-RB | 1..678 | 17..694 | 3390 | 100 | Plus |
CG2098-PA | 1155 | ferrochelatase-RA | 519..1152 | 61..694 | 3170 | 100 | Plus |
CG2098-PC | 846 | ferrochelatase-RC | 519..841 | 61..383 | 1615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:13:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FeCH-RB | 1338 | CG2098-RB | 492..1169 | 17..694 | 3390 | 100 | Plus |
FeCH-RA | 1407 | CG2098-RA | 605..1238 | 61..694 | 3170 | 100 | Plus |
FeCH-RC | 1466 | CG2098-RC | 605..927 | 61..383 | 1615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:13:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31810999..31811365 | 383..17 | 1835 | 100 | Minus |
3R | 32079331 | 3R | 31810629..31810942 | 694..381 | 1570 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:13:54 has no hits.
BO18074.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:17:57 Download gff for
BO18074.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2098-PB | 1..681 | 17..698 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 08:10:47 Download gff for
BO18074.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RB | 489..1174 | 14..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:47:16 Download gff for
BO18074.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RB | 489..1174 | 14..700 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:47:16 Download gff for
BO18074.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31810624..31810940 | 383..700 | 99 | <- | Minus |
3R | 31811000..31811368 | 14..382 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 08:10:47 Download gff for
BO18074.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27636346..27636662 | 383..700 | 99 | <- | Minus |
arm_3R | 27636722..27637090 | 14..382 | 99 | | Minus |
BO18074.complete Sequence
712 bp assembled on 2006-10-11
GenBank Submission: FJ634307
> BO18074.complete
GAAGTTATCAGTCGACATGCACAATTGCAGCTATTTATTTGATCCCCTCT
ACCTCTTTAGTAATCTGCCCTCGGATATCAAATGGAGCATTATCGACAGG
TGGGGCACTCATCCACTTCTAATCAAAACGTTTGCCCAGCGAATTCGCGA
CGAGCTGGCCAAATTTGTGGAAACGAAACGAAATGATGTGGTCATCCTCT
TCACTGCCCACTCCCTTCCCCTTAAGGCTGTGAACCGGGGTGACGCGTAT
CCCTCGGAGATTGGTGCTAGCGTACACATGGTGATGCAGGAACTTGGTCA
GACGAATCCCTACAGCCTGGCATGGCAATCCAAGGTGGGCCCGCTACCCT
GGCTGGCGCCCGCAACTGATGATGCCATTAAGGGCTATGTTAAGCAAGGC
CTGAAGAACTTCATCCTTGTGCCCATTGCCTTCGTGAACGAGCACATCGA
GACGCTGCATGAGCTCGACATCGAGTACTGCGACGAACTGGCCAAGGAGG
TAGGCGTAGAGGAAATCCGTCGAGCTGCAACCCCCAACGACCACCCGCTG
TTCATCGACGCCCTGACAAACGTTGTGGCAGACCACCTGAAGTCCCAGCA
GGCAGTCAACCCCAAGTTCCTCATGCGTTGTCCCATGTGCTCCAATCCAA
AGTGCAGGGAGAGCAAAAGCTGGTACCGCCAGCTCTGCTCGAACGCAAGC
TTTCTAGACCAT
BO18074.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:15:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FeCH-RB | 681 | CG2098-PB | 1..678 | 17..694 | 3390 | 100 | Plus |
FeCH-RA | 1155 | CG2098-PA | 519..1152 | 61..694 | 3170 | 100 | Plus |
FeCH-RC | 846 | CG2098-PC | 519..841 | 61..383 | 1615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:15:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FeCH-RB | 1338 | CG2098-RB | 492..1169 | 17..694 | 3390 | 100 | Plus |
FeCH-RA | 1407 | CG2098-RA | 605..1238 | 61..694 | 3170 | 100 | Plus |
FeCH-RC | 1466 | CG2098-RC | 605..927 | 61..383 | 1615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:15:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31810999..31811365 | 383..17 | 1835 | 100 | Minus |
3R | 32079331 | 3R | 31810629..31810942 | 694..381 | 1570 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:15:23 has no hits.
BO18074.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:21:57 Download gff for
BO18074.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ferrochelatase-RB | 1..681 | 17..698 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:41:21 Download gff for
BO18074.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ferrochelatase-RB | 489..1174 | 14..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:56:40 Download gff for
BO18074.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RB | 492..1169 | 17..696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:21:57 Download gff for
BO18074.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ferrochelatase-RB | 489..1174 | 14..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:14:09 Download gff for
BO18074.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RB | 492..1169 | 17..696 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:14:09 Download gff for
BO18074.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31810627..31810940 | 383..696 | 99 | <- | Minus |
3R | 31811000..31811365 | 17..382 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:56:40 Download gff for
BO18074.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27636349..27636662 | 383..696 | 99 | <- | Minus |
arm_3R | 27636722..27637087 | 17..382 | 100 | | Minus |
BO18074.pep Sequence
Translation from 16 to 712
> BO18074.pep
MHNCSYLFDPLYLFSNLPSDIKWSIIDRWGTHPLLIKTFAQRIRDELAKF
VETKRNDVVILFTAHSLPLKAVNRGDAYPSEIGASVHMVMQELGQTNPYS
LAWQSKVGPLPWLAPATDDAIKGYVKQGLKNFILVPIAFVNEHIETLHEL
DIEYCDELAKEVGVEEIRRAATPNDHPLFIDALTNVVADHLKSQQAVNPK
FLMRCPMCSNPKCRESKSWYRQLCSNASFLDH
BO18074.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:06:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FeCH-PB | 226 | CG2098-PB | 1..226 | 1..226 | 1210 | 100 | Plus |
FeCH-PA | 384 | CG2098-PA | 170..384 | 12..226 | 1127 | 98.6 | Plus |
FeCH-PC | 281 | CG2098-PC | 170..280 | 12..122 | 568 | 97.3 | Plus |