Clone Sequence Records
BO18088.3prime Sequence
719 bp (686 high quality bases) assembled on 2006-10-13
> BO18088.3prime
ATGGTCTAGAAAGCTTGCCTGCACCTTCGCCTTCGCAGACTCCGCCTCCG
GAGCTGCCGCCTTGGGCTCGCTGCCCGCCACGGCGGTATCCTGCTCATCA
CGCGGTCTCCTCTTCTGCAACGCATGGACATGGGCCAGGGCATGGGGATG
GGATTGACCCTCGATGGGTTGCAAATACGTGATACTACCGCCGCCGATGC
CTGTGGCCGTTTGCTGATGCAGCTCTCCGGCGGAAGGAGTGGACAGGATC
TTGACCGACGGCTCCGAGGGAGCGGCCAGCGATCTGTGTTGCTGATGTGC
AGCCAATTGCCGCGTGGCCAGGCGCATGATGTGAGCGTAGTCTACAGGCG
GGTGATTGCGGTACTCCGGATGATCCTTAACGTACTGCTCATACGGAACG
GGAACTGGCACGGGCACTGCCTTCACTGGATATCCCGCGTCCACAAGAGC
TTGGAATTCGGCCTGGGTCAGTGGCTTGCCATTGGGAGGCGGCAGATTCA
ATTGCTTCACTTCATCCAGAGTCCGTAGCTTCTGAATAGGAGCTGTAGTG
GGTGTGGGCCGGGATGGTGTGGCAATTCCAGTTCCCTGGGACACATAGAT
ACTGGACTGCGATGGAGACGGTGAGGGATATTCAGCGTGCAGCGGCAGAG
CAGTGGGTGTCACGGCTAGATTTCTCTGGGAATGCTTTAGCGGATCCGGC
GGACTGGGATAGAAGTTGG
BO18088.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 18:52:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14165-PA | 1983 | CG14165-RA | 1280..1980 | 719..19 | 3505 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:17:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34382-RF | 2858 | CG34382-RF | 2037..2737 | 719..19 | 3505 | 100 | Minus |
CG34382-RE | 2864 | CG34382-RE | 2043..2743 | 719..19 | 3505 | 100 | Minus |
CG34382-RD | 3085 | CG34382-RD | 2264..2964 | 719..19 | 3505 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:17:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9883672..9884372 | 719..19 | 3505 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:17:02 has no hits.
BO18088.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:18:06 Download gff for
BO18088.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14165-PA | 1280..1983 | 15..719 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:34:23 Download gff for
BO18088.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34382-RD | 2264..2967 | 15..719 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:27:02 Download gff for
BO18088.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34382-RD | 2264..2967 | 15..719 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:27:02 Download gff for
BO18088.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9883672..9884375 | 15..719 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:34:23 Download gff for
BO18088.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9876772..9877475 | 15..719 | 99 | | Minus |
BO18088.5prime Sequence
777 bp (708 high quality bases) assembled on 2006-10-13
> BO18088.5prime
GAAGTTATCAGTCGACATGAGAATCCAAATCTTGCTCCTGACACTCTTGC
TGGGCCTCGTCTGCGCCCAGGCCGTGGATGCGGAGGCCAAGAGCAGCCAA
GCCAAGCCAGCGGAAGACAGCAAGAGCTCCGCCTCCACGCCACTGGAATC
GGAGGCGACCAAAGACAAGCGACAAGTGAGCTCCAAGGAGACGTCTCTGT
ACCCCAACCACCGCAGCTCGGCGGCATCGTCAAGCGCCAACGATGATCCC
GAGGATGGTCAGGAAACCATCTACGGCTCCAAGCCGAATCAGTTCATCAT
TCGCCCCATTGCACCGCACCAGCATCAGCAGCACGAATCGCACCAGGAGC
CGCAGTTGAGGAACTTTGCGGCGGCCAATTCTCGACCCCATGCCGCCCAA
CTTCTCGAGCAGAGTCAGGAGGTGCAGCACTACGTGTATCTGCAAGATAT
AATGCGCCATCATCAGCCCAAGGCCCTGCTGGCCGCAGGTCAAGGCAAGG
GTGCGGCCAGTGCGCCCAAGAAGTCATCCACTCCGGTGGCCGAGGAGGAG
CAGGAGCAGGAACAGGAGGCGGAACAGCGATACGCGGTGTCCATTCAGCC
GCAGCCGCAGCAACAGCTCCAGCTCCAGCAACCACGTCCACGTCAGTACC
AGGGTCCCTATCAACTGCCATTGCCGCTGCCTGCTCCACAGCATCGATCG
GTGAATCCCCCGCAGCAGCAGCAGCAACATCAGCAGCCCTACCAAGTGAT
TCCCGAAGAACAGTTTCTTAAGATCCT
BO18088.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 18:52:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14166-PA | 486 | CG14166-RA | 1..405 | 17..421 | 2025 | 100 | Plus |
CG14165-PA | 1983 | CG14165-RA | 1..326 | 452..777 | 1580 | 99.3 | Plus |
CG33962-PA | 882 | Cp7Fa-RA | 601..627 | 539..565 | 135 | 100 | Plus |
CG8787-PB | 4683 | Asx-RB | 4578..4604 | 712..738 | 135 | 100 | Plus |
CG8787-PA | 5010 | Asx-RA | 4578..4604 | 712..738 | 135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:44:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34382-RE | 2864 | CG34382-RE | 329..1089 | 17..777 | 3775 | 99.7 | Plus |
CG34382-RC | 3091 | CG34382-RC | 556..1316 | 17..777 | 3775 | 99.7 | Plus |
CG34382-RF | 2858 | CG34382-RF | 329..1083 | 17..777 | 3675 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:44:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9880205..9880576 | 53..424 | 1860 | 100 | Plus |
3L | 28110227 | 3L | 9882300..9882616 | 420..736 | 1570 | 99.7 | Plus |
3L | 28110227 | 3L | 9882676..9882718 | 735..777 | 200 | 97.7 | Plus |
3L | 28110227 | 3L | 9879540..9879577 | 17..54 | 190 | 100 | Plus |
Blast to na_te.dros performed 2015-02-11 15:44:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..6869 | 596..737 | 224 | 62 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6923 | 543..725 | 201 | 59.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2326..2530 | 543..744 | 188 | 59.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2337..2478 | 596..737 | 170 | 57.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6689..6859 | 572..745 | 170 | 56.3 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1065..1160 | 543..638 | 164 | 66 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6749..6890 | 596..737 | 162 | 59.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2258..2430 | 553..737 | 160 | 57.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2322..2468 | 596..745 | 158 | 57.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1527..1578 | 686..737 | 134 | 73.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2322..2398 | 686..762 | 133 | 63.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2455..2538 | 549..635 | 130 | 64.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2766..2889 | 608..731 | 125 | 55.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2738..2889 | 600..761 | 121 | 56.2 | Plus |
TART-A | 13424 | TART-A 13424bp | 8606..8664 | 682..737 | 117 | 69.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1085..1154 | 596..665 | 116 | 62.9 | Plus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7922..7988 | 678..743 | 116 | 65.7 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 9366..9432 | 678..743 | 116 | 65.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6741..6826 | 660..745 | 115 | 59.3 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1085..1133 | 689..737 | 110 | 69.4 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 9181..9209 | 715..743 | 109 | 86.2 | Plus |
BO18088.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:18:07 Download gff for
BO18088.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14166-PA | 1..413 | 17..429 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 20:15:33 Download gff for
BO18088.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34382-RC | 550..1316 | 9..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:41:55 Download gff for
BO18088.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34382-RC | 550..1316 | 9..777 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:41:55 Download gff for
BO18088.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9879534..9879576 | 9..53 | 91 | -> | Plus |
3L | 9880206..9880573 | 54..421 | 100 | -> | Plus |
3L | 9882302..9882616 | 422..736 | 99 | -> | Plus |
3L | 9882678..9882718 | 737..777 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 20:15:33 Download gff for
BO18088.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9872634..9872676 | 9..53 | 91 | -> | Plus |
arm_3L | 9873306..9873673 | 54..421 | 100 | -> | Plus |
arm_3L | 9875402..9875716 | 422..736 | 99 | -> | Plus |
arm_3L | 9875778..9875818 | 737..777 | 97 | | Plus |
BO18088.complete Sequence
2449 bp assembled on 2007-03-23
GenBank Submission: FJ634314
> BO18088.complete
GAAGTTATCAGTCGACATGAGAATCCAAATCTTGCTCCTGACACTCTTGC
TGGGCCTCGTCTGCGCCCAGGCCGTGGATGCGGAGGCCAAGAGCAGCCAA
GCCAAGCCAGCGGAAGACAGCAAGAGCTCCGCCTCCACGCCACTGGAATC
GGAGGCGACCAAAGACAAGCGACAAGTGAGCTCCAAGGAGACGTCTCTGT
ACCCCAACCACCGCAGCTCGGCGGCATCGTCAAGCGCCAACGATGATCCC
GAGGATGGTCAGGAAACCATCTACGGCTCCAAGCCGAATCAGTTCATCAT
TCGCCCCATTGCACCGCACCAGCATCAGCAGCACGAATCGCACCAGGAGC
CGCAGTTGAGGAACTTTGCGGCGGCCAATTCTCGACCCCATGCCGCCCAA
CTTCTCGAGCAGAGTCAGGAGGTGCAGCACTACGTGTATCTGCAAGATAT
AATGCGCCATCATCAGCCCAAGGCCCTGCTGGCCGCAGGTCAAGGCAAGG
GTGCGGCCAGTGCGCCCAAGAAGTCATCCACTCCGGTGGCCGAGGAGGAG
CAGGAGCAGGAACAGGAGGCGGAACAGCGATACGCGGTGTCCATTCAGCC
GCAGCCGCAGCAACAGCTCCAGCTCCAGCAACCACGTCCACGTCAGTACC
AGGGTCCCTATCAACTGCCATTGCCGCTGCCTGCTCCACAGCATCGATCG
GTGAATCCCCAGCAGCAGCAGCAGCAACATCAGCAGCCCTACCAAGTGAT
TCCCGAAGAGCAGTTTCTTAAGATCCTGGAGGAGGAGCTGCAGGCTAGAG
CCTATCATGAGCAACTTCGTCAGCAGCAGCAGCATCAACAGCAGCAGCAG
CAGCAGCAGCAACACCAACAGCAGCAGCAGCAACAGCACCACAAGCAACT
GCCCATCCACAGCACGGCTGCCACTCACAAAGTGTTGCAGCAGGCGGATC
CCTCGCTAGGATTAGGCGGCTATCGCGAGCGTTTTGTGGCCGAGCAGGAG
CTGGTGACACCAACTTATTCGCATCCCCGCGGTGGTCCCAAATATCTGCC
CTTGCCACAGGCGCAGCAAATCCAAGAGGATGATGAGCAACAACAGCAAC
AACCGCAGCGGGTGCAGCTCCACAAACCGATACCGCATCCCGGGCAGCAA
CTCATCCATGGACTGCCACCCCAGATTGCCTACTACCAGCCACAGATAAG
CTACAAGACCCTGCCCAACCATCCACTGGCGAAATCTTCTCTGGAAAGTG
AGATTGAGAAATTGCTGGCAGCCAATAAGCCAGGACAATCGTTGGCCTAC
GTTGACAGCAGCAATGAGCAGGTGGCGACAAGGCAGCCCGCTCCGCAGCA
CCCACCACCACCCACCTCGCATCCCGCGCTGAGGCAACCCAAGGCATACC
TGGCCAGTACGCCCAACTCCCTGCTGGATGCCAATAACCAACCGTTCGTT
CCATCGCTCTTCAAGTTCAGCAACTATCAGCAACCGACGCCAATTTATCC
CACGCCGGAACCCAAGCGACTGGGACCCGTCGTCTATCCCACACAGCAGG
CCAATCAGCCGCAACCCTCGCAGTATTACTACCAGGAGGCTACGCCCACC
GGGGCACCCAAGCCGAGTCCCATTCCCAAGCAGTACCACCGATCCAAGCA
CTACAAGCTGGCTTCACCCGCTAAGGCATTGCTCTATGCCGATTATGAAC
GTCAGGGATCGCCATCTCCACCGCCGCCATCCAACTTCTATCCCAGTCCG
CCGGATCCGCTAAAGCATTCCCAGAGAAATCTAGCCGTGACACCCACTGC
TCTGCCGCTGCACGCTGAATATCCCTCACCGTCTCCATCGCAGTCCAGTA
TCTATGTGTCCCAGGGAACTGGAATTGCCACACCATCCCGGCCCACACCC
ACTACAGCTCCTATTCAGAAGCTACGGACTCTGGATGAAGTGAAGCAATT
GAATCTGCCGCCTCCCAATGGCAAGCCACTGACCCAGGCCGAATTCCAAG
CTCTTGTGGACGCGGGATATCCAGTGAAGGCAGTGCCCGTGCCAGTTCCC
GTTCCGTATGAGCAGTACGTTAAGGATCATCCGGAGTACCGCAATCACCC
GCCTGTAGACTACGCTCACATCATGCGCCTGGCCACGCGGCAATTGGCTG
CACATCAGCAACACAGATCGCTGGCCGCTCCCTCGGAGCCGTCGGTCAAG
ATCCTGTCCACTCCTTCCGCCGGAGAGCTGCATCAGCAAACGGCCACAGG
CATCGGCGGCGGTAGTATCACGTATTTGCAACCCATCGAGGGTCAATCCC
ATCCCCATGCCCTGGCCCATGTCCATGCGTTGCAGAAGAGGAGACCGCGT
GATGAGCAGGATACCGCCGTGGCGGGCAGCGAGCCCAAGGCGGCAGCTCC
GGAGGCGGAGTCTGCGAAGGCGAAGGTGCAGGCAAGCTTTCTAGACCAT
BO18088.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:36:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34382-RE | 2418 | CG34382-PE | 1..2415 | 17..2431 | 12075 | 100 | Plus |
CG34382-RC | 2418 | CG34382-PC | 1..2415 | 17..2431 | 12075 | 100 | Plus |
CG34382-RF | 2412 | CG34382-PF | 1..2409 | 17..2431 | 11950 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:36:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34382-RE | 2864 | CG34382-RE | 329..2743 | 17..2431 | 12075 | 100 | Plus |
CG34382-RC | 3091 | CG34382-RC | 556..2970 | 17..2431 | 12075 | 100 | Plus |
CG34382-RF | 2858 | CG34382-RF | 329..2737 | 17..2431 | 11950 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:36:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9882676..9884372 | 735..2431 | 8485 | 100 | Plus |
3L | 28110227 | 3L | 9880205..9880576 | 53..424 | 1860 | 100 | Plus |
3L | 28110227 | 3L | 9882300..9882616 | 420..736 | 1585 | 100 | Plus |
3L | 28110227 | 3L | 9879540..9879577 | 17..54 | 190 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 16:36:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..7132 | 596..994 | 319 | 57.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2347..2682 | 783..1127 | 300 | 58.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2329..2424 | 804..899 | 300 | 79.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2337..2653 | 596..914 | 274 | 56.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2322..2856 | 596..1127 | 206 | 53.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..7092 | 543..900 | 203 | 53.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6526..6899 | 830..1210 | 184 | 54.6 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1065..1160 | 543..638 | 164 | 66 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6533..6827 | 866..1151 | 159 | 54.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2766..3031 | 608..888 | 154 | 54.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6792..6947 | 1041..1199 | 149 | 56 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2406 | 1054..1151 | 147 | 62.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2411 | 1066..1174 | 142 | 60.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6888 | 1054..1205 | 141 | 55.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2348..2445 | 1054..1151 | 139 | 60.2 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1087..1144 | 1054..1111 | 137 | 70.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6872 | 1063..1219 | 135 | 58.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2369..2433 | 1063..1126 | 133 | 69.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6461..6788 | 806..1151 | 125 | 54.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6790..6924 | 1063..1197 | 125 | 56.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1541..1587 | 1063..1109 | 118 | 72.3 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1085..1154 | 596..665 | 116 | 62.9 | Plus |
BO18088.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:09:35 Download gff for
BO18088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34382-RC | 1..2418 | 17..2435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:26:45 Download gff for
BO18088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34382-RC | 550..2973 | 9..2435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:56:32 Download gff for
BO18088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34382-RC | 556..2970 | 17..2433 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:09:35 Download gff for
BO18088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34382-RC | 550..2973 | 9..2435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:22:22 Download gff for
BO18088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34382-RC | 556..2970 | 17..2433 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:22:22 Download gff for
BO18088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9879540..9879576 | 17..53 | 100 | -> | Plus |
3L | 9880206..9880573 | 54..421 | 100 | -> | Plus |
3L | 9882302..9882616 | 422..736 | 100 | -> | Plus |
3L | 9882678..9884372 | 737..2433 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:56:32 Download gff for
BO18088.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9873306..9873673 | 54..421 | 100 | -> | Plus |
arm_3L | 9872640..9872676 | 17..53 | 100 | -> | Plus |
arm_3L | 9875402..9875716 | 422..736 | 100 | -> | Plus |
arm_3L | 9875778..9877472 | 737..2433 | 99 | | Plus |
BO18088.pep Sequence
Translation from 16 to 2449
> BO18088.pep
MRIQILLLTLLLGLVCAQAVDAEAKSSQAKPAEDSKSSASTPLESEATKD
KRQVSSKETSLYPNHRSSAASSSANDDPEDGQETIYGSKPNQFIIRPIAP
HQHQQHESHQEPQLRNFAAANSRPHAAQLLEQSQEVQHYVYLQDIMRHHQ
PKALLAAGQGKGAASAPKKSSTPVAEEEQEQEQEAEQRYAVSIQPQPQQQ
LQLQQPRPRQYQGPYQLPLPLPAPQHRSVNPQQQQQQHQQPYQVIPEEQF
LKILEEELQARAYHEQLRQQQQHQQQQQQQQQHQQQQQQQHHKQLPIHST
AATHKVLQQADPSLGLGGYRERFVAEQELVTPTYSHPRGGPKYLPLPQAQ
QIQEDDEQQQQQPQRVQLHKPIPHPGQQLIHGLPPQIAYYQPQISYKTLP
NHPLAKSSLESEIEKLLAANKPGQSLAYVDSSNEQVATRQPAPQHPPPPT
SHPALRQPKAYLASTPNSLLDANNQPFVPSLFKFSNYQQPTPIYPTPEPK
RLGPVVYPTQQANQPQPSQYYYQEATPTGAPKPSPIPKQYHRSKHYKLAS
PAKALLYADYERQGSPSPPPPSNFYPSPPDPLKHSQRNLAVTPTALPLHA
EYPSPSPSQSSIYVSQGTGIATPSRPTPTTAPIQKLRTLDEVKQLNLPPP
NGKPLTQAEFQALVDAGYPVKAVPVPVPVPYEQYVKDHPEYRNHPPVDYA
HIMRLATRQLAAHQQHRSLAAPSEPSVKILSTPSAGELHQQTATGIGGGS
ITYLQPIEGQSHPHALAHVHALQKRRPRDEQDTAVAGSEPKAAAPEAESA
KAKVQASFLDH
BO18088.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:44:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34382-PE | 805 | CG34382-PE | 1..805 | 1..805 | 4234 | 100 | Plus |
CG34382-PC | 805 | CG34382-PC | 1..805 | 1..805 | 4234 | 100 | Plus |
CG34382-PF | 803 | CG34382-PF | 1..803 | 1..805 | 4212 | 99.8 | Plus |
CG34382-PD | 803 | CG34382-PD | 1..803 | 1..805 | 4212 | 99.8 | Plus |
CG6026-PB | 1555 | CG6026-PB | 385..1065 | 196..801 | 263 | 24.5 | Plus |