Clone Sequence Records
BO18105.3prime Sequence
808 bp (794 high quality bases) assembled on 2006-10-13
> BO18105.3prime
ATGGTCTAGAAAGCTTGCCGCCACTGCCTTGTGTTTCTCCCACTCGATCT
CGTCCAGCCGCGGCGGCGCCGTAGCGCTCTCTGTCGTGATGCCGCCAATC
TCCGAACTGGTGCCGGTGACCACCAGGAGCGGCATTTGTCGCCGTTGCAA
ACGTTTGGCTATCGGCGGCACGAAGAGATCGTGCTTGATTAGCGTGCAGT
CCGCATCCTGGTAGATGCGTCGATTGTTGTCCCATTTCAGCAGGGCAAAC
AGCCAGGACAACAGCCATCCGCCAAAGAAGGTTATCAGGAAGCCCAAAGC
AGCGTACCACATGTAGCTAATCCTGTACAGGTAAAAGTAATGCTCTTCCT
CGGCCACCGCTATCACAGTCTTGAGGAAAATGTCGCGGGCAAAGCTCCTG
TCCACCGGACATCCAGCCGTGGACATATCCAAGCTGACCAGCGGTGGCTT
CGGTTGTCCGAAACCGATCCAAAAGCAGAACGCCAGCGATATGAGCAGCC
CACCAATGGCTCCCTTTTCATTCGCCTTGGTCACATACATGCCCAGCGTG
AAGAGGCCCAGCAGAGGGCCTCCAATGATGCCGAAGATTGACAGTGCCGC
CTGCAGTAGTCCGCCAATTGATCCCGCCATGAAGGCCATGCCAATGCAGA
GGGCTCCGAAGAATAGGGACAACAGCTTGGAGTACCACAAGGTCTGACGG
TCGGTGAGCGTGCGTTTGGCACAGCAGCTGACCAAGGGCTTGAGGTAATC
CTCCAGGGTGACGGCTGCCAGCGAGCTGATTATCGAACTAATCGTGGAGA
GGCTGGCG
BO18105.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 18:55:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32669-PA | 1815 | CG32669-RA | 1023..1812 | 808..19 | 3950 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:05:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32669-RA | 2385 | CG32669-RA | 1185..1974 | 808..19 | 3950 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:05:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10843108..10843897 | 19..808 | 3950 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 16:05:41 has no hits.
BO18105.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:18:19 Download gff for
BO18105.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-PA | 1023..1815 | 15..808 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 12:40:25 Download gff for
BO18105.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-RA | 1185..1979 | 12..808 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:24:02 Download gff for
BO18105.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-RA | 1185..1979 | 12..808 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:24:02 Download gff for
BO18105.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10843103..10843897 | 12..808 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 12:40:25 Download gff for
BO18105.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10737136..10737930 | 12..808 | 99 | | Plus |
BO18105.5prime Sequence
936 bp (736 high quality bases) assembled on 2006-10-13
> BO18105.5prime
GAAGTTATCAGTCGACATGGCTACTTTGGGCGCCTGGGACTACACGATCC
TGGCGGTGGTGCTGATCATCTCCGTTGCGATTGGCATCTACTACCGTTTC
GTGGGCGGCAAGCAGAGCACCACCACCGAATATCTTCTGGCGGATCGTTC
CATGAACGTGGCGCCTGTGGCCTTTAGCCTGATGGCCAGTTTCATGTCGG
CCGTCACCATATTGGGCGTATCCATGGAGAACTACCAGTACGGTACAATG
TTCGTCGTGATCAATCTGTCGTATGTGTTGTCCACGCCGGTGGCCGCCTA
CCTCATCATTCCGGTCTTCTATCGCCTAAAGACGGCCAGTGTGTACGAGT
ATCTGGAACTGCGGTTTGGCTATGCCACCCGATTGGCCGCCTCGCTGAGC
TTCTCGCTCCAGATGGTCCTATACATGGGCATTGTGGTCTATGCGCCGGC
TCTGGCCCTGGAAGCTGTCACTGGACTGAGCCAGGTCTTCTCCATCGTAA
TTGTTGGAGTCGTGTGCACGTTCTATGCGACGCTCGGCGGAATGAAGGCC
GTACTCATCACGGACATCTATCAGTCGCTCCTCATGTTCGCCGCTGTCTT
CAGTGTAATCATCTGTGCCTGGGTGAAGGCGGGCAGCTTGGAGGTGATAT
GGCGCGTGGCGCAGGAAAACGGACGCATCAATCTGACCAACTTCAGTGTG
GATCCAACGGAACGTCACACTTGGTTCACCCAGATTTTAGGCGGATGTGC
CACCTATTTGGCCATCTATGGTGTGAATCAAACGCAGGTCCAGCGCCTGA
TGGCGGTGAAGAGTTTGAGTGCCGCTCGAGCGGCCCTGTGGTGGTGCCTG
CCCATTCTGTGCCTGCTTAGTCTGAGCACCTGTTTCTCCGGTCTGTGCAT
CTACTGGTACTACCGCAACTGTGACCCGCTGCTGGA
BO18105.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 18:55:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32669-PA | 1815 | CG32669-RA | 1..920 | 17..936 | 4575 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-05 01:44:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32669-RA | 2385 | CG32669-RA | 163..1082 | 17..936 | 4585 | 99.9 | Plus |
| CG10444-RA | 2790 | CG10444-RA | 422..845 | 171..594 | 420 | 74 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-05 01:43:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10844000..10844919 | 936..17 | 4585 | 99.9 | Minus |
| 2R | 25286936 | 2R | 20273655..20274078 | 594..171 | 395 | 72.9 | Minus |
Blast to na_te.dros performed on 2015-02-05 01:43:57 has no hits.
BO18105.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:18:19 Download gff for
BO18105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-PA | 1..919 | 17..935 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 22:04:53 Download gff for
BO18105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-RA | 156..1081 | 7..935 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 02:59:52 Download gff for
BO18105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-RA | 156..1081 | 7..935 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 02:59:52 Download gff for
BO18105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10844001..10844926 | 7..935 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 22:04:53 Download gff for
BO18105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10738034..10738959 | 7..935 | 99 | | Minus |
BO18105.complete Sequence
1846 bp assembled on 2007-03-23
GenBank Submission: FJ634319
> BO18105.complete
GAAGTTATCAGTCGACATGGCTACTTTGGGCGCCTGGGACTACACGATCC
TGGCGGTGGTGCTGATCATCTCCGTTGCGATTGGCATCTACTACCGTTTC
GTGGGCGGCAAGCAGAGCACCACCACCGAATATCTTCTGGCGGATCGTTC
CATGAACGTGGCGCCTGTGGCCTTTAGCCTGATGGCCAGTTTCATGTCGG
CCGTCACCATATTGGGCGTATCCATGGAGAACTACCAGTACGGTACAATG
TTCGTCGTGATCAATCTGTCGTATGTGTTGTCCACGCCGGTGGCCGCCTA
CCTCATCATTCCGGTCTTCTATCGCCTAAAGACGGCCAGTGTGTACGAGT
ATCTGGAACTGCGGTTTGGCTATGCCACCCGATTGGCCGCCTCGCTGAGC
TTCTCGCTCCAGATGGTCCTATACATGGGCATTGTGGTCTATGCGCCGGC
TCTGGCCCTGGAAGCTGTCACTGGACTGAGCCAGGTCTTCTCCATCGTAA
TTGTTGGAGTCGTGTGCACGTTCTATGCGACGCTCGGCGGAATGAAGGCC
GTACTCATCACGGACATCTATCAGTCGCTCCTCATGTTCGCCGCTGTCTT
CAGTGTAATCATCTGTGCCTGGGTGAAGGCGGGCAGCTTGGAGGTGATAT
GGCGCGTGGCGCAGGAAAACGGACGCATCAATCTGACCAACTTCAGTGTG
GATCCAACGGAACGTCACACTTGGTTCACCCAGATTTTAGGCGGATGTGC
CACCTATTTGGCCATCTATGGTGTGAATCAAACGCAGGTCCAGCGCCTGA
TGGCGGTGAAGAGTTTGAGTGCCGCTCGAGCGGCCCTGTGGTGGTGCCTG
CCCATTCTGTGCCTGCTTAGTCTGAGCACCTGTTTCTCCGGTCTGTGCAT
CTACTGGTACTACCGCGACTGTGACCCGCTGCTGGAGGGTAGAGTCAACT
CGCGCGATCAAGTGATGCCGCTCTTTGTCGTGGACACGATGGGCGAATAC
ACCGGTTTGGCTGGCCTCTTCGTTTCGGGAATCTTTTGCGCCAGCCTCTC
CACGATTAGTTCGATAATCAGCTCGCTGGCAGCCGTCACCCTGGAGGATT
ACCTCAAGCCCTTGGTCAGCTGCTGTGCCAAACGCACGCTCACCGACCGT
CAGACCTTGTGGTACTCCAAGCTGTTGTCCCTATTCTTCGGAGCCCTCTG
CATTGGCATGGCCTTCATGGCGGGATCAATTGGCGGACTACTGCAGGCGG
CACTGTCAATCTTCGGCATCATTGGAGGCCCTCTGCTGGGCCTCTTCACG
CTGGGCATGTATGTGACCAAGGCGAATGAAAAGGGAGCCATTGGTGGGCT
GCTCATATCGCTGGCGTTCTGCTTTTGGATCGGTTTCGGACAACCGAAGC
CACCGCTGGTCAGCTTGGATATGTCCACGGCTGGATGTCCGGTGGACAGG
AGCTTTGCCCGCGACATTTTCCTCAAGACTGTGATAGCGGTGGCCGAGGA
AGAGCATTACTTTTACCTGTACAGGATTAGCTACATGTGGTACGCTGCTT
TGGGCTTCCTGATAACCTTCTTTGGCGGATGGCTGTTGTCCTGGCTGTTT
GCCCTGCTGAAATGGGACAACAATCGACGCATCTACCAGGATGCGGACTG
CACGCTAATCAAGCACGATCTCTTCGTGCCGCCGATAGCCAAACGTTTGC
AACGGCGACAAATGCCGCTCCTGGTGGTCACCGGCACCAGTTCGGAGATT
GGCGGCATCACGACAGAGAGCGCTACGGCGCCGCCGCGGCTGGACGAGAT
CGAGTGGGAGAAACACAAGGCAGTGGCGGCAAGCTTTCTAGACCAT
BO18105.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:38:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32669-RA | 1815 | CG32669-PA | 1..1812 | 17..1828 | 9060 | 100 | Plus |
| CG10444-RA | 1764 | CG10444-PA | 161..584 | 171..594 | 395 | 72.9 | Plus |
| CG10444-RA | 1764 | CG10444-PA | 821..1104 | 831..1114 | 205 | 71.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:38:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32669-RA | 2385 | CG32669-RA | 163..1974 | 17..1828 | 9060 | 100 | Plus |
| CG10444-RA | 2790 | CG10444-RA | 422..845 | 171..594 | 395 | 72.9 | Plus |
| CG10444-RA | 2790 | CG10444-RA | 1082..1365 | 831..1114 | 205 | 71.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:38:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10843108..10844919 | 1828..17 | 9060 | 100 | Minus |
| 2R | 25286936 | 2R | 20273655..20274078 | 594..171 | 395 | 72.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:38:17 has no hits.
BO18105.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:09:24 Download gff for
BO18105.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-RA | 1..1815 | 17..1832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:26:31 Download gff for
BO18105.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-RA | 156..1977 | 7..1832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:49:15 Download gff for
BO18105.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-RA | 163..1974 | 17..1830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:09:25 Download gff for
BO18105.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-RA | 156..1977 | 7..1832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:50:22 Download gff for
BO18105.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-RA | 163..1974 | 17..1830 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:50:22 Download gff for
BO18105.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10843106..10844919 | 17..1830 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:49:15 Download gff for
BO18105.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10737139..10738952 | 17..1830 | 99 | | Minus |
BO18105.pep Sequence
Translation from 16 to 1846
> BO18105.pep
MATLGAWDYTILAVVLIISVAIGIYYRFVGGKQSTTTEYLLADRSMNVAP
VAFSLMASFMSAVTILGVSMENYQYGTMFVVINLSYVLSTPVAAYLIIPV
FYRLKTASVYEYLELRFGYATRLAASLSFSLQMVLYMGIVVYAPALALEA
VTGLSQVFSIVIVGVVCTFYATLGGMKAVLITDIYQSLLMFAAVFSVIIC
AWVKAGSLEVIWRVAQENGRINLTNFSVDPTERHTWFTQILGGCATYLAI
YGVNQTQVQRLMAVKSLSAARAALWWCLPILCLLSLSTCFSGLCIYWYYR
DCDPLLEGRVNSRDQVMPLFVVDTMGEYTGLAGLFVSGIFCASLSTISSI
ISSLAAVTLEDYLKPLVSCCAKRTLTDRQTLWYSKLLSLFFGALCIGMAF
MAGSIGGLLQAALSIFGIIGGPLLGLFTLGMYVTKANEKGAIGGLLISLA
FCFWIGFGQPKPPLVSLDMSTAGCPVDRSFARDIFLKTVIAVAEEEHYFY
LYRISYMWYAALGFLITFFGGWLLSWLFALLKWDNNRRIYQDADCTLIKH
DLFVPPIAKRLQRRQMPLLVVTGTSSEIGGITTESATAPPRLDEIEWEKH
KAVAASFLDH
BO18105.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:44:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32669-PA | 604 | CG32669-PA | 1..604 | 1..604 | 3105 | 100 | Plus |
| CG10444-PA | 587 | CG10444-PA | 3..569 | 1..565 | 1754 | 58.2 | Plus |
| CG5687-PB | 683 | CG5687-PB | 94..647 | 2..553 | 925 | 35.1 | Plus |
| CG5687-PA | 683 | CG5687-PA | 94..647 | 2..553 | 925 | 35.1 | Plus |
| CG6723-PA | 587 | CG6723-PA | 15..538 | 6..528 | 849 | 35.3 | Plus |
