Clone Sequence Records
BO18144.3prime Sequence
773 bp (713 high quality bases) assembled on 2006-10-13
> BO18144.3prime
ATGGTCTAGAAAGCTTGCGTCGACCTCCTCGATGGTGGGGCCAGCACCGC
CGGCTCCGGCAGCGCCAGCGGCACCAGCCGCTCCGGGCATACCTCCGGGA
CCGCCGGGCATGCCACCGGGTGGGAAACCGGCGCCCTGGTATAGCTTGGT
AATGATCGGGTTGCACACACCCTCCAGTTCCTTCTGGCGGTGCTCGTACT
CCTCCTTGTCAGCCAGCTGGTTGGCATCCAGCCACTTGATGGTCTCGTTG
CACTTGTCCAGGATTGTGGTGCGGTCAGAGTCCGAGATCTTGGTCTTCAG
GTTATCCTCGTCGAGGGTGGCCTTCATGTTGAAGCAGTACGACTCGAGGC
CGTTCTTGGCGGCAATGGTCTCCTTCTGCTTCTCATCCTCGTTGCGGTAC
TTCTCGGCCTCGTTGACCATGCGCTCGATGTCCTCCTTGGAGAGACGACC
CTTGTCGTTGGTAATGGTGATCTTGTTCTCCTTGTTGGTCGAACGCTCCA
GGGCAGTCACGTTGAGGATACCGTTGGCATCGATATCGAAGGTGACCTCG
ATCTGGGGCACACCACGTGGTGCGGGGGGGATGCCCGACAGCTCGAACTT
GCCGAGCAGGTTGTTGTCCTTGGTCATGGCACGCTCTCCCTCGTACACCT
GGATCAGCACACCGGGCTGGTTGTCCGAGTAGGTGGTGAAGGTCTGGGTC
TGCTTGGTCGGGATGGTGGTGTTGCGCTTGATCAACACGCTCATCCCACC
GCCCGCGGTTTCGATACCCAGGG
BO18144.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 19:01:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4264-PE | 1956 | Hsc70-4-RE | 1199..1953 | 773..19 | 3725 | 99.7 | Minus |
| CG4264-PF | 1956 | Hsc70-4-RF | 1199..1953 | 773..19 | 3725 | 99.7 | Minus |
| CG4264-PA | 1956 | Hsc70-4-RA | 1199..1953 | 773..19 | 3725 | 99.7 | Minus |
| CG4264-PC | 1956 | Hsc70-4-RC | 1199..1953 | 773..19 | 3725 | 99.7 | Minus |
| CG4264-PD | 1956 | Hsc70-4-RD | 1199..1953 | 773..19 | 3725 | 99.7 | Minus |
| CG4264-PB | 1956 | Hsc70-4-RB | 1199..1953 | 773..19 | 3725 | 99.7 | Minus |
| CG8937-PC | 1668 | Hsc70-1-RC | 1252..1301 | 462..413 | 175 | 94 | Minus |
| CG8937-PD | 1668 | Hsc70-1-RD | 1252..1301 | 462..413 | 175 | 94 | Minus |
| CG8937-PA | 1926 | Hsc70-1-RA | 1510..1559 | 462..413 | 175 | 94 | Minus |
| CG4147-PB | 1971 | Hsc70-3-RB | 1387..1428 | 654..613 | 160 | 95.2 | Minus |
| CG4147-PA | 1971 | Hsc70-3-RA | 1387..1428 | 654..613 | 160 | 95.2 | Minus |
| CG4147-PD | 1971 | Hsc70-3-RD | 1387..1428 | 654..613 | 160 | 95.2 | Minus |
| CG4147-PC | 1971 | Hsc70-3-RC | 1387..1428 | 654..613 | 160 | 95.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:44:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsc70-4-RG | 2336 | CG4264-RG | 1280..2034 | 773..19 | 3745 | 99.7 | Minus |
| Hsc70-4-RB | 2339 | CG4264-RB | 1283..2037 | 773..19 | 3745 | 99.7 | Minus |
| Hsc70-4-RD | 2352 | CG4264-RD | 1296..2050 | 773..19 | 3745 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:44:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15245558..15246312 | 773..19 | 3745 | 99.7 | Minus |
| 3L | 28110227 | 3L | 13976912..13977306 | 771..377 | 640 | 77.5 | Minus |
| 3R | 32079331 | 3R | 12465969..12466362 | 377..770 | 500 | 75.1 | Plus |
| 3R | 32079331 | 3R | 12503947..12504340 | 770..377 | 500 | 75.1 | Minus |
| 3R | 32079331 | 3R | 12507230..12507623 | 770..377 | 500 | 75.1 | Minus |
| 3R | 32079331 | 3R | 12510513..12510906 | 770..377 | 500 | 75.1 | Minus |
| 3R | 32079331 | 3R | 11954701..11955094 | 377..770 | 485 | 74.9 | Plus |
| 3R | 32079331 | 3R | 11959984..11960377 | 770..377 | 485 | 74.9 | Minus |
| 3R | 32079331 | 3R | 24055536..24055909 | 397..770 | 475 | 75.1 | Plus |
| X | 23542271 | X | 11803058..11803313 | 515..770 | 410 | 77.3 | Plus |
| 3R | 32079331 | 3R | 13046614..13046988 | 771..397 | 360 | 73.1 | Minus |
Blast to na_te.dros performed on 2015-02-11 18:44:47 has no hits.
BO18144.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:18:58 Download gff for
BO18144.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4264-PF | 1199..1956 | 15..773 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-27 02:57:01 Download gff for
BO18144.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RD | 1296..2060 | 9..773 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 20:46:16 Download gff for
BO18144.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RD | 1296..2060 | 9..773 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 20:46:16 Download gff for
BO18144.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15245558..15246322 | 9..773 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-27 02:57:01 Download gff for
BO18144.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11071280..11072044 | 9..773 | 99 | | Minus |
BO18144.5prime Sequence
833 bp (715 high quality bases) assembled on 2006-10-13
> BO18144.5prime
GAAGTTATCAGTCGACATGTCTAAAGCTCCTGCTGTTGGTATTGATTTGG
GCACCACCTACTCGTGCGTGGGCGTGTTCCAGCATGGCAAGGTCGAGATC
ATCGCCAACGACCAGGGTAATCGTACCACTCCATCCTATGTTGCCTTCAC
CGATACGGAGCGTCTGATCGGAGATGCCGCCAAGAACCAGGTGGCGATGA
ACCCGACCCAGACGATCTTCGACGCCAAGCGCTTGATTGGTCGCAAGTTC
GATGATGCCGCCGTGCAGTCTGACATGAAGCACTGGCCCTTCGAGGTGGT
CAGCGCCGATGGCAAGCCCAAGATCGAGGTGACCTACAAGGACGAGAAGA
AGACCTTCTTCCCCGAGGAGATCTCTTCGATGGTGCTTACCAAGATGAAG
GAGACCGCCGAGGCCTATCTGGGCAAGACTGTGACCAACGCGGTCATCAC
CGTGCCGGCCTACTTCAACGACTCTCAGCGTCAGGCGACCAAGGACGCCG
GCACCATCGCCGGTCTGAACGTGCTGCGTATCATCAACGAGCCCACTGCC
GCTGCTATCGCTTACGGTCTGGACAAGAAGGCTGTTGGAGAGCGCAACGT
GCTCATCTTCGATCTGGGCGGCGGCACCTTCGATGTGTCCATCCTGTCGA
TCGATGACGGTATCTTTGAGGTCAAGTCCACGGCCGGAGATACGCATCTG
GGTGGTGAGGACTTCGACAACCGTCTGGTCACCCACTTCGTGCAGGAGTT
CAAGCGCAAGCACAAGAATGATCTGACCACCAACAAGCGTGCTCTGCGTC
GTCTGCGCACCGCTTGCGAGCGTGCAAAGCGTA
BO18144.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 19:01:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4264-PE | 1956 | Hsc70-4-RE | 1..817 | 17..833 | 4060 | 99.8 | Plus |
| CG4264-PF | 1956 | Hsc70-4-RF | 1..817 | 17..833 | 4060 | 99.8 | Plus |
| CG4264-PA | 1956 | Hsc70-4-RA | 1..817 | 17..833 | 4060 | 99.8 | Plus |
| CG4264-PC | 1956 | Hsc70-4-RC | 1..817 | 17..833 | 4060 | 99.8 | Plus |
| CG4264-PD | 1956 | Hsc70-4-RD | 1..817 | 17..833 | 4060 | 99.8 | Plus |
| CG4264-PB | 1956 | Hsc70-4-RB | 1..817 | 17..833 | 4060 | 99.8 | Plus |
| CG6489-PA | 1926 | Hsp70Bc-RA | 23..92 | 48..117 | 175 | 90 | Plus |
| CG5834-PA | 1926 | Hsp70Bbb-RA | 23..92 | 48..117 | 175 | 90 | Plus |
| CG31359-PA | 1926 | Hsp70Bb-RA | 23..92 | 48..117 | 175 | 90 | Plus |
| CG31449-PA | 1926 | Hsp70Ba-RA | 23..92 | 48..117 | 175 | 90 | Plus |
| CG18743-PA | 1929 | Hsp70Ab-RA | 23..92 | 48..117 | 175 | 90 | Plus |
| CG31366-PA | 1929 | Hsp70Aa-RA | 23..92 | 48..117 | 175 | 90 | Plus |
| CG8937-PA | 1926 | Hsc70-1-RA | 64..113 | 80..129 | 175 | 94 | Plus |
| CG6489-PA | 1926 | Hsp70Bc-RA | 337..399 | 362..424 | 165 | 90.4 | Plus |
| CG5834-PA | 1926 | Hsp70Bbb-RA | 337..399 | 362..424 | 165 | 90.4 | Plus |
| CG31359-PA | 1926 | Hsp70Bb-RA | 337..399 | 362..424 | 165 | 90.4 | Plus |
| CG31449-PA | 1926 | Hsp70Ba-RA | 337..399 | 362..424 | 165 | 90.4 | Plus |
| CG6489-PA | 1926 | Hsp70Bc-RA | 565..621 | 590..646 | 160 | 91.2 | Plus |
| CG5834-PA | 1926 | Hsp70Bbb-RA | 565..621 | 590..646 | 160 | 91.2 | Plus |
| CG31359-PA | 1926 | Hsp70Bb-RA | 565..621 | 590..646 | 160 | 91.2 | Plus |
| CG31449-PA | 1926 | Hsp70Ba-RA | 565..621 | 590..646 | 160 | 91.2 | Plus |
| CG18743-PA | 1929 | Hsp70Ab-RA | 565..621 | 590..646 | 160 | 91.2 | Plus |
| CG31366-PA | 1929 | Hsp70Aa-RA | 565..621 | 590..646 | 160 | 91.2 | Plus |
| CG8937-PA | 1926 | Hsc70-1-RA | 140..185 | 156..201 | 155 | 93.4 | Plus |
| CG5436-PA | 1908 | Hsp68-RA | 145..179 | 170..204 | 150 | 97.1 | Plus |
| CG5436-PA | 1908 | Hsp68-RA | 418..461 | 443..486 | 145 | 93.1 | Plus |
| CG5436-PA | 1908 | Hsp68-RA | 70..128 | 95..153 | 145 | 89.8 | Plus |
| CG4147-PB | 1971 | Hsc70-3-RB | 571..643 | 509..581 | 140 | 87.6 | Plus |
| CG4147-PA | 1971 | Hsc70-3-RA | 571..643 | 509..581 | 140 | 87.6 | Plus |
| CG4147-PD | 1971 | Hsc70-3-RD | 571..643 | 509..581 | 140 | 87.6 | Plus |
| CG4147-PC | 1971 | Hsc70-3-RC | 571..643 | 509..581 | 140 | 87.6 | Plus |
| CG7756-PA | 1902 | Hsc70-2-RA | 571..617 | 587..633 | 135 | 91.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:02:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsc70-4-RG | 2336 | CG4264-RG | 82..898 | 17..833 | 4070 | 99.9 | Plus |
| Hsc70-4-RB | 2339 | CG4264-RB | 85..901 | 17..833 | 4070 | 99.9 | Plus |
| Hsc70-4-RD | 2352 | CG4264-RD | 98..914 | 17..833 | 4070 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:02:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15244360..15245176 | 17..833 | 4070 | 99.9 | Plus |
| 3R | 32079331 | 3R | 12506038..12506787 | 29..775 | 1225 | 77.9 | Plus |
| 3R | 32079331 | 3R | 12509321..12510070 | 29..775 | 1225 | 77.9 | Plus |
| 3R | 32079331 | 3R | 12466805..12467554 | 775..29 | 1210 | 77.7 | Minus |
| 3R | 32079331 | 3R | 12502755..12503504 | 29..775 | 1210 | 77.7 | Plus |
| 3R | 32079331 | 3R | 24056296..24057094 | 831..36 | 1200 | 77 | Minus |
| 3R | 32079331 | 3R | 11955537..11956286 | 775..29 | 1195 | 77.6 | Minus |
| 3R | 32079331 | 3R | 11958792..11959541 | 29..775 | 1195 | 77.6 | Plus |
| 3R | 32079331 | 3R | 13045581..13046163 | 187..766 | 795 | 76.2 | Plus |
| 3L | 28110227 | 3L | 13975919..13976508 | 224..813 | 715 | 74.7 | Plus |
| X | 23542271 | X | 11803808..11804160 | 717..362 | 635 | 79.2 | Minus |
| 3L | 28110227 | 3L | 13974589..13974773 | 35..219 | 475 | 83.8 | Plus |
| 3R | 32079331 | 3R | 13044985..13045131 | 47..193 | 330 | 81.6 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:02:28 has no hits.
BO18144.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:19:00 Download gff for
BO18144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4264-PD | 1..816 | 17..832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 22:43:13 Download gff for
BO18144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RD | 98..913 | 17..832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:09:52 Download gff for
BO18144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RD | 98..913 | 17..832 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:09:52 Download gff for
BO18144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15244351..15245175 | 8..832 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 22:43:13 Download gff for
BO18144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11070073..11070897 | 8..832 | 99 | | Plus |
BO18144.complete Sequence
1987 bp assembled on 2007-03-23
GenBank Submission: FJ634331
> BO18144.complete
GAAGTTATCAGTCGACATGTCTAAAGCTCCTGCTGTTGGTATTGATTTGG
GCACCACCTACTCGTGCGTGGGCGTGTTCCAGCATGGCAAGGTCGAGATC
ATCGCCAACGACCAGGGTAATCGTACCACTCCATCCTATGTTGCCTTCAC
CGATACGGAGCGTCTGATCGGAGATGCCGCCAAGAACCAGGTGGCGATGA
ACCCGACCCAGACGATCTTCGACGCCAAGCGCTTGATTGGTCGCAAGTTC
GATGATGCCGCCGTGCAGTCTGACATGAAGCACTGGCCCTTCGAGGTGGT
CAGCGCCGATGGCAAGCCCAAGATCGAGGTGACCTACAAGGACGAGAAGA
AGACCTTCTTCCCCGAGGAGATCTCTTCGATGGTGCTTACCAAGATGAAG
GAGACCGCCGAGGCCTATCTGGGCAAGACTGTGACCAACGCGGTCATCAC
CGTGCCGGCCTACTTCAACGACTCTCAGCGTCAGGCGACCAAGGACGCCG
GCACCATCGCCGGTCTGAACGTGCTGCGTATCATCAACGAGCCCACTGCC
GCTGCTATCGCTTACGGTCTGGACAAGAAGGCTGTTGGAGAGCGCAACGT
GCTCATCTTCGATCTGGGCGGCGGCACCTTCGATGTGTCCATCCTGTCGA
TCGATGACGGTATCTTTGAGGTCAAGTCCACGGCCGGAGATACGCATCTG
GGTGGTGAGGACTTCGACAACCGTCTGGTCACCCACTTCGTGCAGGAGTT
CAAGCGCAAGCACAAGAAGGATCTGACCACCAACAAGCGTGCTCTGCGTC
GTCTGCGCACCGCTTGCGAGCGTGCAAAGCGTACCCTGTCGTCCTCCACC
CAGGCCAGCATTGAGATCGACTCTCTGTTCGAGGGTACCGACTTCTACAC
CTCGATTACTCGTGCCCGTTTCGAGGAGTTGAACGCTGATCTGTTCCGCA
GCACCATGGACCCCGTGGAGAAGGCTCTGCGTGACGCCAAGCTGGACAAG
TCGGTCATCCACGACATTGTGCTGGTCGGTGGCTCCACCCGTATCCCCAA
GGTGCAGCGCCTGCTGCAGGATCTGTTCAATGGCAAGGAGCTGAACAAGT
CGATCAATCCCGATGAGGCTGTGGCCTACGGTGCTGCCGTCCAGGCCGCC
ATTCTGCACGGCGACAAGTCGCAGGAGGTGCAGGATCTGCTGCTGCTCGA
TGTGACTCCTCTGTCCCTGGGTATCGAAACCGCTGGCGGTGTGATGAGCG
TGTTGATCAAGCGCAACACCACCATCCCGACCAAGCAGACCCAGACCTTC
ACCACCTACTCGGACAACCAGCCCGGTGTGCTGATCCAGGTGTACGAGGG
AGAGCGTGCCATGACCAAGGACAACAACCTGCTCGGCAAGTTCGAGCTGT
CGGGCATCCCCCCCGCACCACGTGGTGTGCCCCAGATCGAGGTCACCTTC
GATATCGATGCCAACGGTATCCTCAACGTGACTGCCCTGGAGCGTTCGAC
CAACAAGGAGAACAAGATCACCATTACCAACGACAAGGGTCGTCTCTCCA
AGGAGGACATCGAGCGCATGGTCAACGAGGCCGAGAAGTACCGCAACGAG
GATGAGAAGCAGAAGGAGACCATTGCCGCCAAGAACGGCCTCGAGTCGTA
CTGCTTCAACATGAAGGCCACCCTCGACGAGGATAACCTGAAGACCAAGA
TCTCGGACTCTGACCGCACCACAATCCTGGACAAGTGCAACGAGACCATC
AAGTGGCTGGATGCCAACCAGCTGGCTGACAAGGAGGAGTACGAGCACCG
CCAGAAGGAACTGGAGGGTGTGTGCAACCCGATCATTACCAAGCTATACC
AGGGCGCCGGTTTCCCACCCGGTGGCATGCCCGGCGGTCCCGGAGGTATG
CCCGGAGCGGCTGGTGCCGCTGGCGCTGCCGGAGCCGGCGGTGCTGGCCC
CACCATCGAGGAGGTCGACGCAAGCTTTCTAGACCAT
BO18144.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:51:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsc70-4-RG | 1956 | CG4264-PG | 1..1953 | 17..1969 | 9765 | 100 | Plus |
| Hsc70-4-RB | 1956 | CG4264-PB | 1..1953 | 17..1969 | 9765 | 100 | Plus |
| Hsc70-4-RD | 1956 | CG4264-PD | 1..1953 | 17..1969 | 9765 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:51:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsc70-4-RG | 2336 | CG4264-RG | 82..2034 | 17..1969 | 9765 | 100 | Plus |
| Hsc70-4-RB | 2339 | CG4264-RB | 85..2037 | 17..1969 | 9765 | 100 | Plus |
| Hsc70-4-RD | 2352 | CG4264-RD | 98..2050 | 17..1969 | 9765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:51:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15244360..15246312 | 17..1969 | 9765 | 100 | Plus |
| 3L | 28110227 | 3L | 13975919..13977306 | 224..1611 | 2215 | 77.3 | Plus |
| 3R | 32079331 | 3R | 12506038..12507623 | 29..1611 | 2000 | 75.2 | Plus |
| 3R | 32079331 | 3R | 12502755..12504340 | 29..1611 | 1985 | 75.2 | Plus |
| 3R | 32079331 | 3R | 12509321..12510906 | 29..1611 | 1985 | 75.2 | Plus |
| 3R | 32079331 | 3R | 12465969..12467554 | 1611..29 | 1970 | 75.1 | Minus |
| 3R | 32079331 | 3R | 24055536..24057094 | 1591..36 | 1940 | 75.1 | Minus |
| 3R | 32079331 | 3R | 11954701..11956286 | 1611..29 | 1925 | 74.9 | Minus |
| 3R | 32079331 | 3R | 11958792..11960377 | 29..1611 | 1925 | 74.9 | Plus |
| 3R | 32079331 | 3R | 13045581..13046988 | 187..1591 | 1260 | 72.8 | Plus |
| X | 23542271 | X | 11803808..11804160 | 717..362 | 635 | 79.2 | Minus |
| X | 23542271 | X | 11803058..11803515 | 1473..1010 | 560 | 75.2 | Minus |
| 3L | 28110227 | 3L | 13974589..13974773 | 35..219 | 475 | 83.8 | Plus |
| 3R | 32079331 | 3R | 13044985..13045131 | 47..193 | 330 | 81.6 | Plus |
| 2R | 25286936 | 2R | 14254871..14255028 | 549..392 | 310 | 79.7 | Minus |
| 2R | 25286936 | 2R | 14253788..14253925 | 1470..1333 | 195 | 76.1 | Minus |
Blast to na_te.dros performed on 2014-11-27 19:51:37 has no hits.
BO18144.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:09:19 Download gff for
BO18144.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RA | 1..1956 | 17..1973 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:28:36 Download gff for
BO18144.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RA | 156..2108 | 17..1971 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:59:54 Download gff for
BO18144.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RD | 98..2050 | 17..1971 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:09:19 Download gff for
BO18144.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RA | 148..2118 | 9..1979 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:09:40 Download gff for
BO18144.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RD | 98..2050 | 17..1971 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:09:40 Download gff for
BO18144.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15244360..15246312 | 17..1971 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:59:54 Download gff for
BO18144.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11070082..11072034 | 17..1971 | 99 | | Plus |
BO18144.pep Sequence
Translation from 16 to 1987
> BO18144.pep
MSKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERL
IGDAAKNQVAMNPTQTIFDAKRLIGRKFDDAAVQSDMKHWPFEVVSADGK
PKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAYLGKTVTNAVITVPAYF
NDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGERNVLIFDL
GGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHK
KDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRA
RFEELNADLFRSTMDPVEKALRDAKLDKSVIHDIVLVGGSTRIPKVQRLL
QDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDLLLLDVTPLS
LGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMT
KDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENK
ITITNDKGRLSKEDIERMVNEAEKYRNEDEKQKETIAAKNGLESYCFNMK
ATLDEDNLKTKISDSDRTTILDKCNETIKWLDANQLADKEEYEHRQKELE
GVCNPIITKLYQGAGFPPGGMPGGPGGMPGAAGAAGAAGAGGAGPTIEEV
DASFLDH
BO18144.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:20:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsc70-4-PG | 651 | CG4264-PG | 1..651 | 1..651 | 3324 | 100 | Plus |
| Hsc70-4-PB | 651 | CG4264-PB | 1..651 | 1..651 | 3324 | 100 | Plus |
| Hsc70-4-PD | 651 | CG4264-PD | 1..651 | 1..651 | 3324 | 100 | Plus |
| Hsc70-4-PC | 651 | CG4264-PC | 1..651 | 1..651 | 3324 | 100 | Plus |
| Hsc70-4-PA | 651 | CG4264-PA | 1..651 | 1..651 | 3324 | 100 | Plus |
