Clone Sequence Records
BO18148.5prime Sequence
707 bp (702 high quality bases) assembled on 2006-10-13
> BO18148.5prime
GAAGTTATCAGTCGACATGGGCTCGGTAGGAAGTCGTCAGCTCAACCCCG
TCCAACTGTGTGACCACCAGCAGGCCACAGGGCTGTCCGCAGAGCAGCTA
GAGCAGCTGCACACGCGGTTCCGCAGCCTGGATCGCCACCAGCGCGGCTA
TTTGACGCCCACCGACTTGCTGCGCATTCCGCAGCTATCCCTCAACCCGC
TTCACCGCCAGATCATCGACGGCTTCTTCCCCAGCCGTGACCCCAGCGCG
CGTATCGGTTTCAAGCAGTTCGTGGACACTTGCTCCACCATTTTGGTGCC
ACAGTTTGGACGCGGTTCAGTGAGGCGGCGCGACGGGCGTGTTCAGAAGC
TTCAACTCCTGTCCAAGATGTTTGACACGAGGCGCAGCGGCTGCATCACA
CGCTCCGACTTCCGCCAGATCATGCGCAGCATTGTCAATCTGGCCTGGAG
TCAGCAACAGGATCAGGAACGTCAGGAGGGGCTTTCCGAGAACCGTTTGC
CTGAGGTGGAGGCCGAGTTGCAACTTTTAGAGCATCAGGCCTTTGGCTTC
TGCTGCGACCATATCTCATATGGGGAGTTCGAGAAGCGCCTGTTTAGTGT
GGACGTCGACAGACGGCTGTCGATCGCCAAGTGGCTGGAGGACGATGACG
AGGCCGATGCCGAGATGGTACTGCCAGTTGGCTCAGGCCCGGCAAGCTTT
CTAGACC
BO18148.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:19:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32812-PA | 678 | CG32812-RA | 1..675 | 17..691 | 3375 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:37:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32812-RB | 980 | CG32812-RB | 80..755 | 16..691 | 3380 | 100 | Plus |
| CG32812-RA | 1599 | CG32812-RA | 699..1374 | 16..691 | 3380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:37:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1288045..1288720 | 16..691 | 3380 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 16:37:37 has no hits.
BO18148.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:19:04 Download gff for
BO18148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32812-PA | 1..678 | 17..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:18:22 Download gff for
BO18148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32812-RA | 696..1380 | 13..697 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:03:30 Download gff for
BO18148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32812-RA | 696..1380 | 13..697 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:03:30 Download gff for
BO18148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1288042..1288726 | 13..697 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:18:22 Download gff for
BO18148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1182075..1182759 | 13..697 | 99 | | Plus |
BO18148.3prime Sequence
707 bp (689 high quality bases) assembled on 2006-10-13
> BO18148.3prime
ATGGTCTAGAAAGCTTGCCGGGCCTGAGCCAACTGGCAGTACCATCTCGG
CATCGGCCTCGTCATCGTCCTCCAGCCACTTGGCGATCGACAGCCGTCTG
TCGACGTCCACACTAAACAGGCGCTTCTCGAACTCCCCATATGAGATATG
GTCGCAGCAGAAGCCAAAGGCCTGATGCTCTAAAAGTTGCAACTCGGCCT
CCACCTCAGGCAAACGGTTCTCGGAAAGCCCCTCCTGACGTTCCTGATCC
TGTTGCTGACTCCAGGCCAGATTGACAATGCTGCGCATGATCTGGCGGAA
GTCGGAGCGTGTGATGCAGCCGCTGCGCCTCGTGTCAAACATCTTGGACA
GGAGTTGAAGCTTCTGAACACGCCCGTCGCGCCGCCTCACTGAACCGCGT
CCAAACTGTGGCACCAAAATGGTGGAGCAAGTGTCCACGAACTGCTTGAA
ACCGATACGCGCGCTGGGGTCACGGCTGGGGAAGAAGCCGTCGATGATCT
GGCGGTGAAGCGGGTTGAGGGATAGCTGCGGAATGCGCAGCAAGTCGGTG
GGCGTCAAATAGCCGCGCTGGTGGCGATCCAGGCTGCGGAACCGCGTGTG
CAGCTGCTCTAGCTGCTCTGCGGACAGCCCTGTGGCCTGCTGGTGGTCAC
ACAGTTGGACGGGGTTGAACTGACGACTTCCTACCGAGCCCATGTCGACT
GATAACT
BO18148.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:19:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32812-PA | 678 | CG32812-RA | 1..675 | 693..19 | 3350 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:08:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32812-RB | 980 | CG32812-RB | 80..755 | 694..19 | 3365 | 99.9 | Minus |
| CG32812-RA | 1599 | CG32812-RA | 699..1374 | 694..19 | 3365 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:08:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1288045..1288720 | 694..19 | 3365 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-01-31 10:08:09 has no hits.
BO18148.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:19:04 Download gff for
BO18148.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32812-PA | 1..678 | 15..693 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:33:40 Download gff for
BO18148.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32812-RA | 696..1380 | 13..697 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:43:14 Download gff for
BO18148.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32812-RA | 696..1380 | 13..697 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:43:14 Download gff for
BO18148.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1288042..1288726 | 13..697 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:33:40 Download gff for
BO18148.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1182075..1182759 | 13..697 | 99 | | Minus |
BO18148.complete Sequence
709 bp assembled on 2006-10-11
GenBank Submission: FJ634333
> BO18148.complete
GAAGTTATCAGTCGACATGGGCTCGGTAGGAAGTCGTCAGCTCAACCCCG
TCCAACTGTGTGACCACCAGCAGGCCACAGGGCTGTCCGCAGAGCAGCTA
GAGCAGCTGCACACGCGGTTCCGCAGCCTGGATCGCCACCAGCGCGGCTA
TTTGACGCCCACCGACTTGCTGCGCATTCCGCAGCTATCCCTCAACCCGC
TTCACCGCCAGATCATCGACGGCTTCTTCCCCAGCCGTGACCCCAGCGCG
CGTATCGGTTTCAAGCAGTTCGTGGACACTTGCTCCACCATTTTGGTGCC
ACAGTTTGGACGCGGTTCAGTGAGGCGGCGCGACGGGCGTGTTCAGAAGC
TTCAACTCCTGTCCAAGATGTTTGACACGAGGCGCAGCGGCTGCATCACA
CGCTCCGACTTCCGCCAGATCATGCGCAGCATTGTCAATCTGGCCTGGAG
TCAGCAACAGGATCAGGAACGTCAGGAGGGGCTTTCCGAGAACCGTTTGC
CTGAGGTGGAGGCCGAGTTGCAACTTTTAGAGCATCAGGCCTTTGGCTTC
TGCTGCGACCATATCTCATATGGGGAGTTCGAGAAGCGCCTGTTTAGTGT
GGACGTCGACAGACGGCTGTCGATCGCCAAGTGGCTGGAGGACGATGACG
AGGCCGATGCCGAGATGGTACTGCCAGTTGGCTCAGGCCCGGCAAGCTTT
CTAGACCAT
BO18148.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:06:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32812-RB | 678 | CG32812-PB | 1..675 | 17..691 | 3375 | 100 | Plus |
| CG32812-RA | 678 | CG32812-PA | 1..675 | 17..691 | 3375 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:06:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32812-RB | 980 | CG32812-RB | 80..755 | 16..691 | 3380 | 100 | Plus |
| CG32812-RA | 1599 | CG32812-RA | 699..1374 | 16..691 | 3380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:06:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1288045..1288720 | 16..691 | 3380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:06:34 has no hits.
BO18148.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:21:36 Download gff for
BO18148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32812-RA | 1..678 | 17..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:40:54 Download gff for
BO18148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32812-RA | 1..678 | 17..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:50:27 Download gff for
BO18148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32812-RA | 700..1374 | 17..693 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:21:37 Download gff for
BO18148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32812-RA | 1..678 | 17..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:10:48 Download gff for
BO18148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32812-RA | 700..1374 | 17..693 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:10:48 Download gff for
BO18148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1288046..1288720 | 17..693 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:50:27 Download gff for
BO18148.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1182079..1182753 | 17..693 | 99 | | Plus |
BO18148.pep Sequence
Translation from 16 to 709
> BO18148.pep
MGSVGSRQLNPVQLCDHQQATGLSAEQLEQLHTRFRSLDRHQRGYLTPTD
LLRIPQLSLNPLHRQIIDGFFPSRDPSARIGFKQFVDTCSTILVPQFGRG
SVRRRDGRVQKLQLLSKMFDTRRSGCITRSDFRQIMRSIVNLAWSQQQDQ
ERQEGLSENRLPEVEAELQLLEHQAFGFCCDHISYGEFEKRLFSVDVDRR
LSIAKWLEDDDEADAEMVLPVGSGPASFLDH
BO18148.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:07:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32812-PB | 225 | CG32812-PB | 1..225 | 1..225 | 1171 | 100 | Plus |
| CG32812-PA | 225 | CG32812-PA | 1..225 | 1..225 | 1171 | 100 | Plus |
| elm-PB | 189 | CG2185-PB | 1..185 | 1..203 | 228 | 31.4 | Plus |
| elm-PA | 189 | CG2185-PA | 1..185 | 1..203 | 228 | 31.4 | Plus |
