Clone Sequence Records
BO18159.3prime Sequence
753 bp (739 high quality bases) assembled on 2006-10-13
> BO18159.3prime
ATGGTCTAGAAAGCTTGCGACCTCGGTGCCATCCTCGCCCTCGTCGTCGA
AGAGCTGGCTGGTGCTGCCCTGGCCGCTGCGCGTCGTCGTCACGGACATC
TTCTTCTTGGGCTTCGGTGGTGGGCGTGGTGGGATCTTGGCGGCCTTCGG
AGAGTCACCGCTGCTGCTGGCGTGGCTTGGCGATACGGCGGCACCCGAGC
CGGGTGAAAGGTAGGCGGCGTGGCCCAGTCCGGCACCGCTAATGCTCGAG
CCGGGCAGTATCGTGATCCCCTGTTGCCGAACTCCGTACAGGGGTTCCGT
GTCCATGGAGCCCAGTCGCTGCTGCTGCTGCTGTTGTTGTTGTTGCAACT
GCTGTTGCTGCTGAATCAGCTCGTGTATGGGCTCGTAAATCTTACTGGCA
TTGGTCGCCGAGGACACCGATGTCAGGCTGGGCGTGGCCGGAAGTGGTCG
GTCCCGCATCGAGTACTGCTGACCAGCGCCCCCCTGTGAGCCGGCGATCT
TGGTCAGATTGAGGGTGGAGTTGCCGCCGGCAGTGGTTCGCAATCCCAAG
TTGTCGTACACTGGCTCCGCCTGCAGTTCCGCGGTGGTGGCGGTGCCAGT
CTCGCTGGGATTCGGCGATGTGGGGCTCTGGAATTCACTTAGCTGAATGG
ATCCGTGGCCAGCGGCACCGGAAGTACTGGGCGCCCAGCTGGGAGCGCGC
GGCTTGCGCGGAATGGTCATATATCCCTGTTTCATGACCACACCCGTGGC
CGG
BO18159.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 19:04:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12199-PB | 2796 | kek5-RB | 2059..2793 | 753..19 | 3675 | 100 | Minus |
| CG12199-PA | 2796 | kek5-RA | 2059..2793 | 753..19 | 3675 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:19:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek5-RD | 6284 | CG12199-RD | 3183..3917 | 753..19 | 3675 | 100 | Minus |
| kek5-RC | 4544 | CG12199-RC | 3316..4050 | 753..19 | 3675 | 100 | Minus |
| kek5-RA | 4374 | CG12199-RA | 3146..3880 | 753..19 | 3675 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:19:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19468813..19469547 | 753..19 | 3675 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:19:42 has no hits.
BO18159.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:19:12 Download gff for
BO18159.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12199-PA | 2059..2796 | 18..753 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:34:54 Download gff for
BO18159.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 3146..3886 | 10..753 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:33:51 Download gff for
BO18159.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 3146..3886 | 10..753 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:33:51 Download gff for
BO18159.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19468813..19469553 | 10..753 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:34:54 Download gff for
BO18159.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19362846..19363586 | 10..753 | 99 | | Minus |
BO18159.5prime Sequence
831 bp (755 high quality bases) assembled on 2006-10-13
> BO18159.5prime
GAAGTTATCAGTCGACATGATGGGCAACAGAACGGAACGAAGCGGACGAC
GACTGGGGATGATCCTTCTGCTGCTGGGTGTGCTAGTGGTTCTAATGGCC
CTACCGCCGCCCACCGCAGGCACCACCGATTGGATGCAGAGCTGCGGTAC
ATGCCACTGTCAGTGGAATTCGGGCAAGAAGAGCGCCGACTGCAAGAACA
AGGCGCTAACCAAAATTCCGCAGGACATGAGCAACGAGATGCAGGTGCTG
GACTTTGCCCACAATCAAATACCCGAGCTGCGGCGCGAAGAGTTCCTACT
GGCCGGTCTGCCCAATGTGCACAAGATCTTTTTGCGCAACTGCACCATCC
AGGAGGTGCATCGCGAGGCCTTCAAGGGTCTGCATATCCTAATCGAGCTG
GACCTGTCGGGCAATCGGATACGGGAACTGCATCCGGGCACTTTCGCCGG
CCTGGAGAAGCTGCGCAACGTGATCATCAACAACAACGAGATCGAGGTGC
TGCCCAACCATCTGTTCGTCAACCTGAGCTTCCTGTCGCGCATCGAGTTC
CGGAACAATCGATTGCGCCAGGTGCAGCTGCACGTCTTCGCTGGCACAAT
GGCGCTGAGCGCCATTTCGCTGGAACAGAACCGCCTCTCACATCTGCACA
AGGAGACATTCAAGGATCTGCAGAAGCTGATGCATCTATCGCTGCAGGGT
AACGCATGGAACTGCAGCTGCGAGCTGCAGGACTTTCGCGACTTTGCGAT
CAGCAAACGGCTCTACACACCGCCCACCGATTGCCAGGAGCCGCCACAGC
TGCGCGGCAAGCTGTGGAGCGAGGTGCCATC
BO18159.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 19:04:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12199-PB | 2796 | kek5-RB | 1..815 | 17..831 | 4075 | 100 | Plus |
| CG12199-PA | 2796 | kek5-RA | 1..815 | 17..831 | 4075 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:11:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek5-RD | 6284 | CG12199-RD | 1125..1939 | 17..831 | 4075 | 100 | Plus |
| kek5-RC | 4544 | CG12199-RC | 1258..2072 | 17..831 | 4075 | 100 | Plus |
| kek5-RA | 4374 | CG12199-RA | 1088..1902 | 17..831 | 4075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:10:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19464670..19465484 | 17..831 | 4075 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:10:59 has no hits.
BO18159.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:19:12 Download gff for
BO18159.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12199-PA | 1..815 | 17..831 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 06:48:24 Download gff for
BO18159.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1083..1902 | 9..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:12:45 Download gff for
BO18159.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1083..1902 | 9..831 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:12:45 Download gff for
BO18159.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19464665..19465484 | 9..831 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 06:48:24 Download gff for
BO18159.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19358698..19359517 | 9..831 | 99 | | Plus |
BO18159.complete Sequence
2827 bp assembled on 2007-03-23
GenBank Submission: FJ634335
> BO18159.complete
GAAGTTATCAGTCGACATGATGGGCAACAGAACGGAACGAAGCGGACGAC
GACTGGGGATGATCCTTCTGCTGCTGGGTGTGCTAGTGGTTCTAATGGCC
CTACCGCCGCCCACCGCAGGCACCACCGATTGGATGCAGAGCTGCGGTAC
ATGCCACTGTCAGTGGAATTCGGGCAAGAAGAGCGCCGACTGCAAGAACA
AGGCGCTAACCAAAATTCCGCAGGACATGAGCAACGAGATGCAGGTGCTG
GACTTTGCCCACAATCAAATACCCGAGCTGCGGCGCGAAGAGTTCCTACT
GGCCGGTCTGCCCAATGTGCACAAGATCTTTTTGCGCAACTGCACCATCC
AGGAGGTGCATCGCGAGGCCTTCAAGGGTCTGCATATCCTAATCGAGCTG
GACCTGTCGGGCAATCGGATACGGGAACTGCATCCGGGCACTTTCGCCGG
CCTGGAGAAGCTGCGCAACGTGATCATCAACAACAACGAGATCGAGGTGC
TGCCCAACCATCTGTTCGTCAACCTGAGCTTCCTGTCGCGCATCGAGTTC
CGGAACAATCGATTGCGCCAGGTGCAGCTGCACGTCTTCGCTGGCACAAT
GGCGCTGAGCGCCATTTCGCTGGAACAGAACCGCCTCTCACATCTGCACA
AGGAGACATTCAAGGATCTGCAGAAGCTGATGCATCTATCGCTGCAGGGT
AACGCATGGAACTGCAGCTGCGAGCTGCAGGACTTTCGCGACTTTGCGAT
CAGCAAACGGCTCTACACACCGCCCACCGATTGCCAGGAGCCGCCACAGC
TGCGCGGCAAGCTGTGGAGCGAGGTGCCATCGGAGAACTTCGCCTGCCGG
CCGCGCATTTTGGGTTCCGTGCGCTCCTTCATCGAGGCCAATCACGACAA
TATCTCGCTACCCTGCCGCATTGTCGGCAGTCCGCGTCCCAATGTCACCT
GGGTGTACAACAAGCGGCCATTGCAGCAGTACGACCCGCGTGTGCGTGTC
CTCACCTCCGTGGAACAGATGCCGGAGCAGCCCTCCCAGGTGCTCACCTC
GGAGCTGCGCATCGTGGGCGTACGGGCCTCCGACAAGGGTGCCTACACCT
GTGTGGCGGATAACCGGGGCGGACGGGCGGAGGCCGAGTTCCAGCTGCTC
GTGAGCGGTGACTATGCCGGCGCGGTATCCGCCTCCGATGGCATGGGCAT
GGGCGCCATTGGGGCACCAACCATTGATCCGCAAACGAACATGTTTCTCA
TCATCTGTCTAATCATTACGACGCTGCTGCTCCTGCTGCTCGTGGCGGTG
CTGACGCTCTTCTGGTACTGCCGTCGCATCAAGACCTATCAAAAGGACAC
CACCATGATGAGCGGCGACGGGCTGATCTCTTCCAAGATGGACAAGACGC
ACAACGGCTCCATGCTCGAGGGTTCCGTCATCATGGAGATGCAGAAGAGC
CTGCTCAACGAGGTCAATCCAGTCGAGAAGCCGCCACGGCGCACGGACAT
CGAGAGCGTGGATGGTGGCGATGACGTGCTCGAGATCAAGAAGACGCTGC
TCGACGACACCGTCTATGTGGCCAATCACTCGCGCGACGAAGAAGCCGTC
TCAGTGGCCATGTCGGATACGACGACCACGCCCCGATCTCGACACACCTA
CGTGGATGATGCGTATGCCAATAGCTTGCCACCGGATCTGCTGGCCTTTC
CCGCTCGCGTGCCGCCCACCTCGCCCTCGATGCAATCGTCGCAGTCGAAC
ATACCCGACCAGGTGATCTACGGCATCCGTTCGCCACCGTCGCTAACCAG
TCCGGTCTACACGCATATGACGCCGCACGGCATCTACGGCACCAAGACGA
TGACGGCTCCGCATAACGGCTTTATGACGCTGCAGCATCCCAAGTCGCGC
AACCTGGCGCTCATTGCCACCACCAACAGCAGTCGCCAGCACCAGCACCA
CCATCAGCTGCAGCAGCAGCAGCAGCACCACCACCACCACCAGCAGCAAC
AACAACAGCAGCAGCAGCAGCAACATCCGCTGGCCACCACATCGCCCTTC
CTGCCCGCACCCGTCGTCTATTCGCCGGCCACGGGTGTGGTCATGAAACA
GGGATATATGACCATTCCGCGCAAGCCGCGCGCTCCCAGCTGGGCGCCCA
GTACTTCCGGTGCCGCTGGCCACGGATCCATTCAGCTAAGTGAATTCCAG
AGCCCCACATCGCCGAATCCCAGCGAGACTGGCACCGCCACCACCGCGGA
ACTGCAGGCGGAGCCAGTGTACGACAACTTGGGATTGCGAACCACTGCCG
GCGGCAACTCCACCCTCAATCTGACCAAGATCGCCGGCTCACAGGGGGGC
GCTGGTCAGCAGTACTCGATGCGGGACCGACCACTTCCGGCCACGCCCAG
CCTGACATCGGTGTCCTCGGCGACCAATGCCAGTAAGATTTACGAGCCCA
TACACGAGCTGATTCAGCAGCAACAGCAGTTGCAACAACAACAACAGCAG
CAGCAGCAGCGACTGGGCTCCATGGACACGGAACCCCTGTACGGAGTTCG
GCAACAGGGGATCACGATACTGCCCGGCTCGAGCATTAGCGGTGCCGGAC
TGGGCCACGCCGCCTACCTTTCACCCGGCTCGGGTGCCGCCGTATCGCCA
AGCCACGCCAGCAGCAGCGGTGACTCTCCGAAGGCCGCCAAGATCCCACC
ACGCCCACCACCGAAGCCCAAGAAGAAGATGTCCGTGACGACGACGCGCA
GCGGCCAGGGCAGCACCAGCCAGCTCTTCGACGACGAGGGCGAGGATGGC
ACCGAGGTCGCAAGCTTTCTAGACCAT
BO18159.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:37:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek5-RD | 2796 | CG12199-PD | 1..2793 | 17..2809 | 13965 | 100 | Plus |
| kek5-RC | 2796 | CG12199-PC | 1..2793 | 17..2809 | 13965 | 100 | Plus |
| kek5-RA | 2796 | CG12199-PA | 1..2793 | 17..2809 | 13965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:37:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek5-RD | 6284 | CG12199-RD | 1125..3917 | 17..2809 | 13965 | 100 | Plus |
| kek5-RC | 4544 | CG12199-RC | 1258..4050 | 17..2809 | 13965 | 100 | Plus |
| kek5-RA | 4374 | CG12199-RA | 1088..3880 | 17..2809 | 13965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:37:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19464670..19466221 | 17..1568 | 7760 | 100 | Plus |
| X | 23542271 | X | 19468306..19469547 | 1568..2809 | 6210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:37:26 has no hits.
BO18159.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:09:20 Download gff for
BO18159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1..2796 | 17..2810 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:26:25 Download gff for
BO18159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1066..3869 | 9..2818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:53:44 Download gff for
BO18159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1088..3880 | 17..2811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:09:20 Download gff for
BO18159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1066..3869 | 9..2818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:22:50 Download gff for
BO18159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1088..3880 | 17..2811 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:22:50 Download gff for
BO18159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19464670..19466221 | 17..1568 | 100 | -> | Plus |
| X | 19468307..19469547 | 1569..2811 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:53:44 Download gff for
BO18159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19358703..19360254 | 17..1568 | 100 | -> | Plus |
| arm_X | 19362340..19363580 | 1569..2811 | 99 | | Plus |
BO18159.pep Sequence
Translation from 16 to 2827
> BO18159.pep
MMGNRTERSGRRLGMILLLLGVLVVLMALPPPTAGTTDWMQSCGTCHCQW
NSGKKSADCKNKALTKIPQDMSNEMQVLDFAHNQIPELRREEFLLAGLPN
VHKIFLRNCTIQEVHREAFKGLHILIELDLSGNRIRELHPGTFAGLEKLR
NVIINNNEIEVLPNHLFVNLSFLSRIEFRNNRLRQVQLHVFAGTMALSAI
SLEQNRLSHLHKETFKDLQKLMHLSLQGNAWNCSCELQDFRDFAISKRLY
TPPTDCQEPPQLRGKLWSEVPSENFACRPRILGSVRSFIEANHDNISLPC
RIVGSPRPNVTWVYNKRPLQQYDPRVRVLTSVEQMPEQPSQVLTSELRIV
GVRASDKGAYTCVADNRGGRAEAEFQLLVSGDYAGAVSASDGMGMGAIGA
PTIDPQTNMFLIICLIITTLLLLLLVAVLTLFWYCRRIKTYQKDTTMMSG
DGLISSKMDKTHNGSMLEGSVIMEMQKSLLNEVNPVEKPPRRTDIESVDG
GDDVLEIKKTLLDDTVYVANHSRDEEAVSVAMSDTTTTPRSRHTYVDDAY
ANSLPPDLLAFPARVPPTSPSMQSSQSNIPDQVIYGIRSPPSLTSPVYTH
MTPHGIYGTKTMTAPHNGFMTLQHPKSRNLALIATTNSSRQHQHHHQLQQ
QQQHHHHHQQQQQQQQQQQHPLATTSPFLPAPVVYSPATGVVMKQGYMTI
PRKPRAPSWAPSTSGAAGHGSIQLSEFQSPTSPNPSETGTATTAELQAEP
VYDNLGLRTTAGGNSTLNLTKIAGSQGGAGQQYSMRDRPLPATPSLTSVS
SATNASKIYEPIHELIQQQQQLQQQQQQQQQRLGSMDTEPLYGVRQQGIT
ILPGSSISGAGLGHAAYLSPGSGAAVSPSHASSSGDSPKAAKIPPRPPPK
PKKKMSVTTTRSGQGSTSQLFDDEGEDGTEVASFLDH
BO18159.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:45:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek5-PD | 931 | CG12199-PD | 1..931 | 1..931 | 4858 | 100 | Plus |
| kek5-PC | 931 | CG12199-PC | 1..931 | 1..931 | 4858 | 100 | Plus |
| kek5-PA | 931 | CG12199-PA | 1..931 | 1..931 | 4858 | 100 | Plus |
| kek5-PB | 931 | CG12199-PB | 1..931 | 1..931 | 4858 | 100 | Plus |
| kek4-PC | 649 | CG9431-PC | 33..532 | 34..529 | 770 | 34.9 | Plus |
