BO18201.complete Sequence
1348 bp assembled on 2010-06-24
GenBank Submission: KX795786
> BO18201.complete
GAAGTTATCAGTCGACATGCCCGAACAAGTCACAGATCAGGAGAACCAGG
CTCCACAGCAGCAGACTACTGCTGTGCATGCCTACAATCCCGAAGTCCTG
CAGGATATGTTGCCCGTGTATTACAGGCGCCTCTTTCCCCACCTGCCCTT
CTACCGTTGGCTATCGTATGGATCATCCGAGGATGCTATCTTTTCCAATC
GTGAAATTTCCTTTACACTGCAGGACGATATCTACATACGTTACCTCTGC
TTTGATACCCAAGCTGAATTGGAAAAGGAGATCTGCTCGAGGAATCCTAT
TAAGATTGACATAGGACCAGTAATGCATTCCAAACCCAAAAACCATCGTT
CAATTCCTGGCGGCTTAACGCCCGTACAACGTGAACTCGTTTTTGATATA
GATATGACGGATTACGACGAGGTGCGTACCTGTTGCTCTGGAGCAGGGGT
ATGCCTGAAATGCTGGAAGTTTATGGTGCTGGCTGCCAGGGTTTTGGATG
TCGCTTTGCGCGAGGATTTCGGTTTCGAGCACATAATCTGGATTTTCTCA
GGTAGACGAGGTATCCATTGCTGGGTTTGCGACTACCAAGCCCGTCACTT
GGACGGACGTGGTCGCTATGCTGTGGCGGAATACCTTAACATTATTACCT
ATGCCAGTTTCGCGGGCGGCAATTCACCCAGATGTTCAATGGGAGACCGA
CCGCATCATAGCCTAAAGAGAGCCTTAAAGATAGTGGAGCCCATGTTCGA
GGAGATTGTACTAGAGGATCAGAATCTTTTTGGAACTCCCAAGGGAGTTA
CCAAACTTCTTAACATGGTCCACGATGACGCTGCGCGTGGCGAACTAGAA
TCTTATATGCAAAAGAATTTGGAGGATGGAGCACACTCGCGACTCGTTTG
GGAGAGCTTCATTAAGTACGCCAACTCTATGAGAACATCCACGACAAGTG
CCTGGAGTCGCAAGCTGAAGAACATTGTAGCCGAAATCCAGCTTGGACTG
CTCTATCCTCGTTTGGACATCAATGTCACTAGGGGATTCAATCATTTGCT
AAAGGCACCGTTTTGCATTCATCCAGCCACTGGAAAAGTGTGCGTTCCGT
TTAGTGTGAGTGCTGTGGCCAAGTTTGATCCCACCACAGTGCCGACGATC
ACCCAGTTGCTTCACGAGATCAACGCTTTCGATGATAAGAGCAAGAGCTA
CATGGAGGCGCCGGAGGATAAGAGCCGCATCAAGGATCACAAGAAGACTA
GCATGTTCAAGGGTGTCGTGGTTTTCGAGGAGTTCCTGCGAAAACTGGAG
CGCAGCCAGAAATCTGCCAGCTTGCAGTTTGCAAGCTTTCTAGACCAT
BO18201.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:47:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DNApol-alpha50-RA | 1317 | CG7108-PA | 1..1314 | 17..1330 | 6570 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:47:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DNApol-alpha50-RA | 1569 | CG7108-RA | 196..1509 | 17..1330 | 6570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:47:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8343187..8344344 | 173..1330 | 5775 | 99.9 | Plus |
| 3L | 28110227 | 3L | 8342975..8343134 | 17..176 | 800 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 07:47:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbif\P-element_O | 2986 | Dbif\P-element_O P_O 2986bp Derived from X71634. | 2467..2514 | 531..577 | 111 | 72.9 | Plus |
BO18201.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-24 14:15:40 Download gff for
BO18201.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DNApol-alpha50-RA | 190..1503 | 17..1332 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:59 Download gff for
BO18201.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DNApol-alpha50-RA | 196..1509 | 17..1332 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:03:58 Download gff for
BO18201.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DNApol-alpha50-RA | 196..1509 | 17..1332 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:03:58 Download gff for
BO18201.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8342975..8343134 | 17..176 | 100 | -> | Plus |
| 3L | 8343191..8344344 | 177..1332 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:59 Download gff for
BO18201.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8336075..8336234 | 17..176 | 100 | -> | Plus |
| arm_3L | 8336291..8337444 | 177..1332 | 99 | | Plus |
BO18201.pep Sequence
Translation from 16 to 1348
> BO18201.pep
MPEQVTDQENQAPQQQTTAVHAYNPEVLQDMLPVYYRRLFPHLPFYRWLS
YGSSEDAIFSNREISFTLQDDIYIRYLCFDTQAELEKEICSRNPIKIDIG
PVMHSKPKNHRSIPGGLTPVQRELVFDIDMTDYDEVRTCCSGAGVCLKCW
KFMVLAARVLDVALREDFGFEHIIWIFSGRRGIHCWVCDYQARHLDGRGR
YAVAEYLNIITYASFAGGNSPRCSMGDRPHHSLKRALKIVEPMFEEIVLE
DQNLFGTPKGVTKLLNMVHDDAARGELESYMQKNLEDGAHSRLVWESFIK
YANSMRTSTTSAWSRKLKNIVAEIQLGLLYPRLDINVTRGFNHLLKAPFC
IHPATGKVCVPFSVSAVAKFDPTTVPTITQLLHEINAFDDKSKSYMEAPE
DKSRIKDHKKTSMFKGVVVFEEFLRKLERSQKSASLQFASFLDH
BO18201.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:43:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DNApol-alpha50-PA | 438 | CG7108-PA | 1..438 | 1..438 | 2327 | 100 | Plus |
