Clone Sequence Records
BO18346.3prime Sequence
542 bp (542 high quality bases) assembled on 2006-10-13
> BO18346.3prime
ATGGTCTAGAAAGCTTGCCGGAGTCAAACCGAAGGTGGCCAAGAGGACGA
AGTACCCGGCATGGTCCTTCCATCGGTTTTCCACCCTCGCATAGGTACAA
CGCTGTCGACACCGCCCCCTGATAACAATCAACCCCGTGCGGCGGCATCG
GCGGGAGTTTACTTTAATGTTTTGACAGTAAAATAAACATATCCAAGTGC
GGCTCTCATCAGACGCGAGTGTAGGTGGGTGGGTGCATGGATAACTGGGT
GGTTTTTTGGTGCGCATGCACACGTATGTATTTGTAGTTTGAGTGGCATC
AAATGTGGCAGGGTACACACATGTTAGCAACGACGGAGCAGGAGGAGGAG
GACCGCCGCCCAAGCACATAGATGTCAAATATAATTCATCATCCTGGCGA
AACATCAAAGCCAGCCACTGCATGGACCAAGGACCGAGGACCAAGGACCC
AGTAACAAGGACCAAGGACCAAAGACCTGGGCACAAGGCTACCGGCATGA
GCAAACACAAAGTCGCCAACAGCATCATGTCGACTGATAACT
BO18346.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:20:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32111-PA | 513 | CG32111-RA | 1..510 | 528..19 | 2550 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-03 06:41:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:41:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12642154..12642663 | 528..19 | 2550 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-03 06:41:13 has no hits.
BO18346.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:21:40 Download gff for
BO18346.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32111-PA | 1..513 | 18..528 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:30:30 Download gff for
BO18346.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32111-RA | 1199..1708 | 19..528 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:38:40 Download gff for
BO18346.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12642154..12642663 | 19..528 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:38:40 Download gff for
BO18346.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12642154..12642663 | 19..528 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:30:30 Download gff for
BO18346.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12635254..12635763 | 19..528 | 100 | | Minus |
BO18346.5prime Sequence
542 bp (542 high quality bases) assembled on 2006-10-13
> BO18346.5prime
GAAGTTATCAGTCGACATGATGCTGTTGGCGACTTTGTGTTTGCTCATGC
CGGTAGCCTTGTGCCCAGGTCTTTGGTCCTTGGTCCTTGTTACTGGGTCC
TTGGTCCTCGGTCCTTGGTCCATGCAGTGGCTGGCTTTGATGTTTCGCCA
GGATGATGAATTATATTTGACATCTATGTGCTTGGGCGGCGGTCCTCCTC
CTCCTGCTCCGTCGTTGCTAACATGTGTGTACCCTGCCACATTTGATGCC
ACTCAAACTACAAATACATACGTGTGCATGCGCACCAAAAAACCACCCAG
TTATCCATGCACCCACCCACCTACACTCGCGTCTGATGAGAGCCGCACTT
GGATATGTTTATTTTACTGTCAAAACATTAAAGTAAACTCCCGCCGATGC
CGCCGCACGGGGTTGATTGTTATCAGGGGGCGGTGTCGACAGCGTTGTAC
CTATGCGAGGGTGGAAAACCGATGGAAGGACCATGCCGGGTACTTCGTCC
TCTTGGCCACCTTCGGTTTGACTCCGGCAAGCTTTCTAGACC
BO18346.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:20:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32111-PA | 513 | CG32111-RA | 1..510 | 17..526 | 2550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-10 17:40:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:40:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12642154..12642663 | 17..526 | 2550 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:40:28 has no hits.
BO18346.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:21:40 Download gff for
BO18346.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32111-PA | 1..513 | 17..527 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:42:09 Download gff for
BO18346.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32111-RA | 1199..1708 | 17..526 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:59:09 Download gff for
BO18346.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12642154..12642663 | 17..526 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:59:09 Download gff for
BO18346.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12642154..12642663 | 17..526 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:42:09 Download gff for
BO18346.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12635254..12635763 | 17..526 | 100 | | Plus |
BO18346.complete Sequence
544 bp assembled on 2006-10-11
GenBank Submission: FJ634387
> BO18346.complete
GAAGTTATCAGTCGACATGATGCTGTTGGCGACTTTGTGTTTGCTCATGC
CGGTAGCCTTGTGCCCAGGTCTTTGGTCCTTGGTCCTTGTTACTGGGTCC
TTGGTCCTCGGTCCTTGGTCCATGCAGTGGCTGGCTTTGATGTTTCGCCA
GGATGATGAATTATATTTGACATCTATGTGCTTGGGCGGCGGTCCTCCTC
CTCCTGCTCCGTCGTTGCTAACATGTGTGTACCCTGCCACATTTGATGCC
ACTCAAACTACAAATACATACGTGTGCATGCGCACCAAAAAACCACCCAG
TTATCCATGCACCCACCCACCTACACTCGCGTCTGATGAGAGCCGCACTT
GGATATGTTTATTTTACTGTCAAAACATTAAAGTAAACTCCCGCCGATGC
CGCCGCACGGGGTTGATTGTTATCAGGGGGCGGTGTCGACAGCGTTGTAC
CTATGCGAGGGTGGAAAACCGATGGAAGGACCATGCCGGGTACTTCGTCC
TCTTGGCCACCTTCGGTTTGACTCCGGCAAGCTTTCTAGACCAT
BO18346.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 16:39:14 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 16:39:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:39:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12642154..12642663 | 17..526 | 2550 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:39:13 has no hits.
BO18346.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:20:55 Download gff for
BO18346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32111-RA | 1..513 | 17..527 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:39:54 Download gff for
BO18346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32111-RA | 1197..1706 | 17..526 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:53:58 Download gff for
BO18346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32111-RA | 1199..1708 | 17..528 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:20:55 Download gff for
BO18346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32111-RA | 1197..1706 | 17..526 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:23:34 Download gff for
BO18346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12642154..12642663 | 17..528 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:23:34 Download gff for
BO18346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12642154..12642663 | 17..528 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:53:58 Download gff for
BO18346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12635254..12635763 | 17..528 | 99 | | Plus |
BO18346.pep Sequence
Translation from 16 to 544
> BO18346.pep
MMLLATLCLLMPVALCPGLWSLVLVTGSLVLGPWSMQWLALMFRQDDELY
LTSMCLGGGPPPPAPSLLTCVYPATFDATQTTNTYVCMRTKKPPSYPCTH
PPTLASDESRTWICLFYCQNIKVNSRRCRRTGLIVIRGRCRQRCTYARVE
NRWKDHAGYFVLLATFGLTPASFLDH
Sequence BO18346.pep has no blast hits.