Clone Sequence Records
BO18371.3prime Sequence
808 bp (768 high quality bases) assembled on 2006-10-13
> BO18371.3prime
ATGGTCTAGAAAGCTTGCAATCTCCAAATCTTCGGGATGATACAGTTCCG
TAAGGAGGCGGTACACATACGAGGGGGCATGGCCACCGGTGTTGGATATG
AAAAGGGTGACCAGTTCCGGAGGCACGTAGTCGAACATGGGACTGTATAC
CTTGGCTTCGCGCGCTGGAATCGAATCGTAGGGTATCACATCCTCCGCAC
AGCCGACCATATTGAAGGCGTCCTGCTCGCACAGATGCAATGGTGAGAGT
TTGTACATGGGCGCCAGTACAATGACCGGCACGGAGTAATGCTTGGCGGC
CAGGGCCACTGTATACGCTCCACACGCCGCTCTGAGTCCTCCATTAGCCA
GCACGCTGTGCGTACCGATTATTACCTTGTTGACGCGCGACATCATAGCG
AAGATGGCCGCATCTGGGATCACAACAATCTCCACATTCTTCTCGTTGGC
CAAGCTGGCGGCCAAATTGTGACCCCGGCAGGCTGGCGCACATTCGGCTA
CGATGATGGTGAGAAACTGACGCTTTTTGATCGCCCTTTTGAGGAAATTC
TCGACGCTGCGCGAGTGTCCCAGTGTCAAGATGATCTCCGACGAATGGAT
GTGCTCCTCGGCCTGGACGCAGATGTTCTCCGAACTGGTCTCCAGCTCCG
TTTCCACCTCCTGCAGGTGGTCGAGCAGCGCTTCCCGCAATCCATGCTGG
GGCACCGAGTAATCTACGCTGACGTTGCTCTCGCTGGTCTGCGTGACTAG
CTTGTGAAGCGACAGCGAGGCCTGTGAGTCGTCCGCGAAGTGTTGCACCT
TGGCGTGC
BO18371.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:20:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2677-PA | 1059 | eIF2B-beta-RA | 267..1056 | 808..19 | 3950 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:33:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF2B-beta-RA | 1357 | CG2677-RA | 414..1203 | 808..19 | 3950 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:33:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2705539..2705925 | 475..89 | 1935 | 100 | Minus |
X | 23542271 | X | 2705116..2705450 | 808..474 | 1675 | 100 | Minus |
X | 23542271 | X | 2705994..2706063 | 88..19 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 17:33:36 has no hits.
BO18371.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:21:56 Download gff for
BO18371.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2677-PA | 267..1059 | 16..808 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:22:52 Download gff for
BO18371.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF2B-beta-RA | 414..1207 | 15..808 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:17:53 Download gff for
BO18371.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF2B-beta-RA | 414..1207 | 15..808 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:17:53 Download gff for
BO18371.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2705116..2705449 | 475..808 | 100 | -> | Minus |
X | 2705540..2705925 | 89..474 | 100 | -> | Minus |
X | 2705994..2706067 | 15..88 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:22:52 Download gff for
BO18371.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2599149..2599482 | 475..808 | 100 | -> | Minus |
arm_X | 2599573..2599958 | 89..474 | 100 | -> | Minus |
arm_X | 2600027..2600100 | 15..88 | 97 | | Minus |
BO18371.5prime Sequence
893 bp (754 high quality bases) assembled on 2006-10-13
> BO18371.5prime
GAAGTTATCAGTCGACATGAAGGAACAGCCGCTAAAGGAGATCACACAGC
TCATCCACGCCATCAAAGTGGGGCTGGTGGAGGGATCCTACAACATAACC
AACAAGACGCTGGACATCTTCAAGTACATCATCATGAGCAAGAGCTGGCA
GAACGCCGATGCTCTCATGCAGATTGTGCGCGACCAGTGTAAGATCCTGC
AGGCAGCTCTGCCCCAGGAGACGGTTACCTCGAACATTGCCAGGCGGATC
CTCAAGCTGACTCGCGAGGAGTTCGATCTGTTGCACGCCAAGGTGCAACA
CTTCGCGGACGACTCACAGGCCTCGCTGTCGCTTCACAAGCTAGTCACGC
AGACCAGCGAGAGCAACGTCAGCGTAGATTACTCGGTGCCCCAGCATGGA
TTGCGGGAAGCGCTGCTCGACCACCTGCAGGAGGTGGAAACGGAGCTGGA
GACCAGTTCGGAGAACATCTGCGTCCAGGCCGAGGAGCACATCCATTCGT
CGGAGATCATCTTGACACTGGGACACTCGCGCAGCGTCGAGAATTTCCTC
AAAAGGGCGATCAAAAAGCGTCAGTTTCTCACCATCATCGTAGCCGAATG
TGCGCCAGCCTGCCGGGGTCACAATTTGGCCGCCAGCTTGGCCAACGAGA
AGAATGTGGAGATTGTTGTGATCCCAGATGCGGCCATCTTCGCTATGATG
TCGCGCGTCAACAAGGTAATAATCGGTACGCACAGCGTGCTGGCTAATGG
AGGACTCAGAGCGGCGTGTGGAGCGTATACAGTGGCCCTGGCCGCCAAGC
ATTACTCCGTGCCGGTCATTGTACTGGCGCCCATGTACAAACTCTCACCA
TTGCATCTGTGCGAGCAGGACCCCTTCAATATGGTCGGCTGTG
BO18371.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:20:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2677-PA | 1059 | eIF2B-beta-RA | 1..877 | 17..893 | 4360 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:11:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF2B-beta-RA | 1357 | CG2677-RA | 148..1024 | 17..893 | 4370 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:11:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2704993..2705450 | 160..617 | 2290 | 100 | Plus |
X | 23542271 | X | 2705539..2705816 | 616..893 | 1375 | 99.6 | Plus |
X | 23542271 | X | 2704836..2704923 | 72..159 | 440 | 100 | Plus |
X | 23542271 | X | 2704718..2704774 | 17..73 | 285 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-31 10:11:19 has no hits.
BO18371.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:21:57 Download gff for
BO18371.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2677-PA | 1..877 | 17..893 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:34:41 Download gff for
BO18371.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF2B-beta-RA | 148..1024 | 17..893 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:44:07 Download gff for
BO18371.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF2B-beta-RA | 148..1024 | 17..893 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:44:07 Download gff for
BO18371.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2705540..2705816 | 617..893 | 99 | | Plus |
X | 2704718..2704773 | 17..72 | 100 | -> | Plus |
X | 2704837..2704923 | 73..159 | 100 | -> | Plus |
X | 2704993..2705449 | 160..616 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:34:41 Download gff for
BO18371.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2598751..2598806 | 17..72 | 100 | -> | Plus |
arm_X | 2598870..2598956 | 73..159 | 100 | -> | Plus |
arm_X | 2599026..2599482 | 160..616 | 100 | -> | Plus |
arm_X | 2599573..2599849 | 617..893 | 99 | | Plus |
BO18371.complete Sequence
1090 bp assembled on 2006-10-11
GenBank Submission: FJ634395
> BO18371.complete
GAAGTTATCAGTCGACATGAAGGAACAGCCGCTAAAGGAGATCACACAGC
TCATCCACGCCATCAAAGTGGGGCTGGTGGAGGGATCCTACAACATAACC
AACAAGACGCTGGACATCTTCAAGTACATCATCATGAGCAAGAGCTGGCA
GAACGCCGATGCTCTCATGCAGATTGTGCGCGACCAGTGTAAGATCCTGC
AGGCAGCTCTGCCCCAGGAGACGGTTACCTCGAACATTGCCAGGCGGATC
CTCAAGCTGACTCGCGAGGAGTTCGATCTGTTGCACGCCAAGGTGCAACA
CTTCGCGGACGACTCACAGGCCTCGCTGTCGCTTCACAAGCTAGTCACGC
AGACCAGCGAGAGCAACGTCAGCGTAGATTACTCGGTGCCCCAGCATGGA
TTGCGGGAAGCGCTGCTCGACCACCTGCAGGAGGTGGAAACGGAGCTGGA
GACCAGTTCGGAGAACATCTGCGTCCAGGCCGAGGAGCACATCCATTCGT
CGGAGATCATCTTGACACTGGGACACTCGCGCAGCGTCGAGAATTTCCTC
AAAAGGGCGATCAAAAAGCGTCAGTTTCTCACCATCATCGTAGCCGAATG
TGCGCCAGCCTGCCGGGGTCACAATTTGGCCGCCAGCTTGGCCAACGAGA
AGAATGTGGAGATTGTTGTGATCCCAGATGCGGCCATCTTCGCTATGATG
TCGCGCGTCAACAAGGTAATAATCGGTACGCACAGCGTGCTGGCTAATGG
AGGACTCAGAGCGGCGTGTGGAGCGTATACAGTGGCCCTGGCCGCCAAGC
ATTACTCCGTGCCGGTCATTGTACTGGCGCCCATGTACAAACTCTCACCA
TTGCATCTGTGCGAGCAGGACGCCTTCAATATGGTCGGCTGTGCGGAGGA
TGTGATACCCTACGATTCGATTCCAGCGCGCGAAGCCAAGGTATACAGTC
CCATGTTCGACTACGTGCCTCCGGAACTGGTCACCCTTTTCATATCCAAC
ACCGGTGGCCATGCCCCCTCGTATGTGTACCGCCTCCTTACGGAACTGTA
TCATCCCGAAGATTTGGAGATTGCAAGCTTTCTAGACCAT
BO18371.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:24:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF2B-beta-RA | 1059 | CG2677-PA | 1..1056 | 17..1072 | 5280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:24:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF2B-beta-RA | 1357 | CG2677-RA | 148..1203 | 17..1072 | 5280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:24:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2704993..2705450 | 160..617 | 2290 | 100 | Plus |
X | 23542271 | X | 2705539..2705925 | 616..1002 | 1935 | 100 | Plus |
X | 23542271 | X | 2704836..2704923 | 72..159 | 440 | 100 | Plus |
X | 23542271 | X | 2705994..2706063 | 1003..1072 | 350 | 100 | Plus |
X | 23542271 | X | 2704718..2704774 | 17..73 | 285 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:24:45 has no hits.
BO18371.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:20:41 Download gff for
BO18371.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF2B-beta-RA | 1..1059 | 17..1075 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:39:36 Download gff for
BO18371.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF2B-beta-RA | 143..1201 | 17..1075 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:53:17 Download gff for
BO18371.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF2B-beta-RA | 148..1203 | 17..1074 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:20:41 Download gff for
BO18371.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF2B-beta-RA | 143..1201 | 17..1075 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:24:57 Download gff for
BO18371.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF2B-beta-RA | 148..1203 | 17..1074 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:24:57 Download gff for
BO18371.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2704718..2704773 | 17..72 | 100 | -> | Plus |
X | 2704837..2704923 | 73..159 | 100 | -> | Plus |
X | 2704993..2705449 | 160..616 | 100 | -> | Plus |
X | 2705540..2705925 | 617..1002 | 100 | -> | Plus |
X | 2705994..2706063 | 1003..1074 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:53:17 Download gff for
BO18371.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2598751..2598806 | 17..72 | 100 | -> | Plus |
arm_X | 2598870..2598956 | 73..159 | 100 | -> | Plus |
arm_X | 2599026..2599482 | 160..616 | 100 | -> | Plus |
arm_X | 2599573..2599958 | 617..1002 | 100 | -> | Plus |
arm_X | 2600027..2600096 | 1003..1074 | 97 | | Plus |
BO18371.pep Sequence
Translation from 16 to 1090
> BO18371.pep
MKEQPLKEITQLIHAIKVGLVEGSYNITNKTLDIFKYIIMSKSWQNADAL
MQIVRDQCKILQAALPQETVTSNIARRILKLTREEFDLLHAKVQHFADDS
QASLSLHKLVTQTSESNVSVDYSVPQHGLREALLDHLQEVETELETSSEN
ICVQAEEHIHSSEIILTLGHSRSVENFLKRAIKKRQFLTIIVAECAPACR
GHNLAASLANEKNVEIVVIPDAAIFAMMSRVNKVIIGTHSVLANGGLRAA
CGAYTVALAAKHYSVPVIVLAPMYKLSPLHLCEQDAFNMVGCAEDVIPYD
SIPAREAKVYSPMFDYVPPELVTLFISNTGGHAPSYVYRLLTELYHPEDL
EIASFLDH
BO18371.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:50:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF2B-beta-PA | 352 | CG2677-PA | 1..352 | 1..352 | 1787 | 100 | Plus |
eIF2B-delta-PD | 576 | CG10315-PD | 306..554 | 89..327 | 183 | 23.2 | Plus |
eIF2B-delta-PB | 576 | CG10315-PB | 306..554 | 89..327 | 183 | 23.2 | Plus |
eIF2B-delta-PC | 576 | CG10315-PC | 306..554 | 89..327 | 183 | 23.2 | Plus |
eIF2B-alpha-PA | 306 | CG7883-PA | 97..305 | 130..345 | 180 | 27.6 | Plus |