Clone Sequence Records
BO18436.5prime Sequence
497 bp (497 high quality bases) assembled on 2006-10-13
> BO18436.5prime
GAAGTTATCAGTCGACATGGCCCCACTGCATCTGCTGCTCCACTGTGCCA
CCACTCTGCTGATTGCCAACGCCCTGGTACTGAGTCCCCAATTACTGGGT
GCAGAAAATGAGGCCAAATCGAAAGTCGGTTTCCCCATCGACCTGGACGA
CGGCGTAGATGGGGTGGACCTGCCACTGGAGGTGGAACAGGATGTGGCCG
GGGACCAGTCCGCCGGCAGGTCCCTGCACTCCATGCCGCCCGACTGGCTG
ACCTTCGACGAACCCACTCCGGCCACGAAGCATCGGTCTGGCCACAAGCC
GCAGATCATCCTGAAGCACCCGACCAGCGGATTCCACAAGCTTTCCGCCC
ACGGACATCGCACCTGCCACGTGGAAATCGTCAGCAAGGTGCAAGGTATC
TGCCAGCCGATGCCCATTGGCAGCGCTTGCGTCTCGGATGACTACATGGA
CCTCTACACCGATGCCAACTGCTCATCTCAAGCAAGCTTTCTAGACC
BO18436.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:21:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14075-PA | 468 | CG14075-RA | 1..465 | 17..481 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:42:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14075-RA | 674 | CG14075-RA | 54..518 | 17..481 | 2325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:42:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18985014..18985478 | 17..481 | 2325 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-03 06:42:51 has no hits.
BO18436.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:22:49 Download gff for
BO18436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14075-PA | 1..468 | 17..482 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:30:53 Download gff for
BO18436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14075-RA | 49..518 | 11..481 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:38:51 Download gff for
BO18436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14075-RA | 49..518 | 11..481 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:38:51 Download gff for
BO18436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18985009..18985478 | 11..481 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:30:53 Download gff for
BO18436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18978109..18978578 | 11..481 | 99 | | Plus |
BO18436.complete Sequence
499 bp assembled on 2006-10-11
GenBank Submission: FJ634414
> BO18436.complete
GAAGTTATCAGTCGACATGGCCCCACTGCATCTGCTGCTCCACTGTGCCA
CCACTCTGCTGATTGCCAACGCCCTGGTACTGAGTCCCCAATTACTGGGT
GCAGAAAATGAGGCCAAATCGAAAGTCGGTTTCCCCATCGACCTGGACGA
CGGCGTAGATGGGGTGGACCTGCCACTGGAGGTGGAACAGGATGTGGCCG
GGGACCAGTCCGCCGGCAGGTCCCTGCACTCCATGCCGCCCGACTGGCTG
ACCTTCGACGAACCCACTCCGGCCACGAAGCATCGGTCTGGCCACAAGCC
GCAGATCATCCTGAAGCACCCGACCAGCGGATTCCACAAGCTTTCCGCCC
ACGGACATCGCACCTGCCACGTGGAAATCGTCAGCAAGGTGCAAGGTATC
TGCCAGCCGATGCCCATTGGCAGCGCTTGCGTCTCGGATGACTACATGGA
CCTCTACACCGATGCCAACTGCTCATCTCAAGCAAGCTTTCTAGACCAT
BO18436.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:30:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14075-RA | 468 | CG14075-PA | 1..465 | 17..481 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:30:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14075-RA | 674 | CG14075-RA | 54..518 | 17..481 | 2325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:30:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18985014..18985478 | 17..481 | 2325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:30:44 has no hits.
BO18436.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:20:35 Download gff for
BO18436.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14075-RA | 1..468 | 17..482 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:39:28 Download gff for
BO18436.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14075-RA | 1..468 | 17..482 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:21 Download gff for
BO18436.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14075-RA | 54..518 | 17..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:20:36 Download gff for
BO18436.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14075-RA | 1..468 | 17..482 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:09:38 Download gff for
BO18436.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14075-RA | 54..518 | 17..483 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:09:38 Download gff for
BO18436.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18985014..18985478 | 17..483 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:21 Download gff for
BO18436.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18978114..18978578 | 17..483 | 99 | | Plus |
BO18436.pep Sequence
Translation from 16 to 499
> BO18436.pep
MAPLHLLLHCATTLLIANALVLSPQLLGAENEAKSKVGFPIDLDDGVDGV
DLPLEVEQDVAGDQSAGRSLHSMPPDWLTFDEPTPATKHRSGHKPQIILK
HPTSGFHKLSAHGHRTCHVEIVSKVQGICQPMPIGSACVSDDYMDLYTDA
NCSSQASFLDH
BO18436.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:50:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14075-PA | 155 | CG14075-PA | 1..155 | 1..155 | 829 | 100 | Plus |
