Clone Sequence Records
BO18437.3prime Sequence
521 bp (521 high quality bases) assembled on 2006-10-13
> BO18437.3prime
ATGGTCTAGAAAGCTTGCAAGAGGATAAAACTTTAAGCCGTAGATCCTGC
GGACTTCGTGATGACGGGCTCTTCGCGAGCAAGTGGGGCACCGAGAGCTC
TCCCGCAGGACGTTGTTGATGCAGTGGCGCCCAAAGAGGTGGCCACAACG
CAGGGACACCATGGAATGCCTGCCATGCGGCTCACATTTCAAATCGCAGA
TGGAGCAGATGTTGACTTTGTACAGGAAGTCCAGTGCCTTGTTGAGCGAT
TTCAAATAGCTGTGCGTCTGGGCAATGTGCCTCACCAGCAGAGTGAAGTA
CTCATATTTGCCTAGCTCTTGCTGCAAACTCATTAGAATATTCCCGCGCC
TTGAATGGTATAGATGCATCCGTGATGTGACCGATTCCAGTTGGGCTAGT
CGCTGTTCTGGACTGGCGAAGCTCTCCTCGAGAATGATCTCTTGAATTTC
TTTCTCCTGCTCTTGCAGCTCCTTCAACAAGTCGACAATTTTCGGTAGAT
GTAACATGTCGACTGATAACT
BO18437.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:21:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14983-PA | 492 | CG14983-RA | 1..489 | 507..19 | 2445 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:01:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14983-RA | 607 | CG14983-RA | 14..502 | 507..19 | 2445 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:01:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3948804..3949292 | 19..507 | 2445 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-08 12:01:40 has no hits.
BO18437.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:22:53 Download gff for
BO18437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14983-PA | 1..492 | 15..507 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:39:05 Download gff for
BO18437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14983-RA | 6..508 | 12..516 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:43:55 Download gff for
BO18437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14983-RA | 6..508 | 12..516 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:43:55 Download gff for
BO18437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3948798..3949300 | 12..516 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:39:05 Download gff for
BO18437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3948798..3949300 | 12..516 | 98 | | Plus |
BO18437.5prime Sequence
521 bp (521 high quality bases) assembled on 2006-10-13
> BO18437.5prime
GAAGTTATCAGTCGACATGTTACATCTACCGAAAATTGTCGACTTGTTGA
AGGAGCTGCAAGAGCAGGAGAAAGAAATTCAAGAGATCATTCTCGAGGAG
AGCTTCGCCAGTCCAGAACAGCGACTAGCCCAACTGGAATCGGTCACATC
ACGGATGCATCTATACCATTCAAGGCGCGGGAATATTCTAATGAGTTTGC
AGCAAGAGCTAGGCAAATATGAGTACTTCACTCTGCTGGTGAGGCACATT
GCCCAGACGCACAGCTATTTGAAATCGCTCAACAAGGCACTGGACTTCCT
GTACAAAGTCAACATCTGCTCCATCTGCGATTTGAAATGTGAGCCGCATG
GCAGGCATTCCATGGTGTCCCTGCGTTGTGGCCACCTCTTTGGGCGCCAC
TGCATCAACAACGTCCTGCGGGAGAGCTCTCGGTGCCCCACTTGCTCGCG
AAGAGCCCGTCATCACGAAGTCCGCAGGATCTACGGCTTAAAGTTTTATC
CTCTTGCAAGCTTTCTAGACC
BO18437.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:21:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14983-PA | 492 | CG14983-RA | 1..489 | 17..505 | 2445 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:19:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14983-RA | 607 | CG14983-RA | 14..502 | 17..505 | 2445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:19:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3948804..3949292 | 505..17 | 2445 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 16:19:23 has no hits.
BO18437.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:22:55 Download gff for
BO18437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14983-PA | 1..492 | 17..509 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:12:41 Download gff for
BO18437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14983-RA | 6..508 | 8..512 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:45:55 Download gff for
BO18437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14983-RA | 6..508 | 8..512 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:45:55 Download gff for
BO18437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3948798..3949300 | 8..512 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:12:41 Download gff for
BO18437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3948798..3949300 | 8..512 | 98 | | Minus |
BO18437.complete Sequence
523 bp assembled on 2006-10-11
GenBank Submission: FJ634415
> BO18437.complete
GAAGTTATCAGTCGACATGTTACATCTACCGAAAATTGTCGACTTGTTGA
AGGAGCTGCAAGAGCAGGAGAAAGAAATTCAAGAGATCATTCTCGAGGAG
AGCTTCGCCAGTCCAGAACAGCGACTAGCCCAACTGGAATCGGTCACATC
ACGGATGCATCTATACCATTCAAGGCGCGGGAATATTCTAATGAGTTTGC
AGCAAGAGCTAGGCAAATATGAGTACTTCACTCTGCTGGTGAGGCACATT
GCCCAGACGCACAGCTATTTGAAATCGCTCAACAAGGCACTGGACTTCCT
GTACAAAGTCAACATCTGCTCCATCTGCGATTTGAAATGTGAGCCGCATG
GCAGGCATTCCATGGTGTCCCTGCGTTGTGGCCACCTCTTTGGGCGCCAC
TGCATCAACAACGTCCTGCGGGAGAGCTCTCGGTGCCCCACTTGCTCGCG
AAGAGCCCGTCATCACGAAGTCCGCAGGATCTACGGCTTAAAGTTTTATC
CTCTTGCAAGCTTTCTAGACCAT
BO18437.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:59:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14983-RA | 492 | CG14983-PA | 1..489 | 17..505 | 2445 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:59:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14983-RA | 607 | CG14983-RA | 14..502 | 17..505 | 2445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:59:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3948804..3949292 | 505..17 | 2445 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:59:08 has no hits.
BO18437.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:20:36 Download gff for
BO18437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14983-RA | 1..492 | 17..509 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:39:30 Download gff for
BO18437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14983-RA | 6..508 | 8..512 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:43:22 Download gff for
BO18437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14983-RA | 19..502 | 22..507 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:20:37 Download gff for
BO18437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14983-RA | 6..508 | 8..512 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:57:19 Download gff for
BO18437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14983-RA | 19..502 | 22..507 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:57:19 Download gff for
BO18437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3948802..3949287 | 22..507 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:43:22 Download gff for
BO18437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3948802..3949287 | 22..507 | 99 | | Minus |
BO18437.pep Sequence
Translation from 16 to 523
> BO18437.pep
MLHLPKIVDLLKELQEQEKEIQEIILEESFASPEQRLAQLESVTSRMHLY
HSRRGNILMSLQQELGKYEYFTLLVRHIAQTHSYLKSLNKALDFLYKVNI
CSICDLKCEPHGRHSMVSLRCGHLFGRHCINNVLRESSRCPTCSRRARHH
EVRRIYGLKFYPLASFLDH
BO18437.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:50:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14983-PA | 163 | CG14983-PA | 1..163 | 1..163 | 859 | 100 | Plus |
| CG17329-PA | 162 | CG17329-PA | 6..162 | 12..169 | 258 | 40.4 | Plus |
| CG13481-PC | 176 | CG13481-PC | 35..170 | 26..156 | 217 | 35.3 | Plus |
| CG13481-PB | 176 | CG13481-PB | 35..170 | 26..156 | 217 | 35.3 | Plus |
