Clone Sequence Records
BO18451.3prime Sequence
434 bp (434 high quality bases) assembled on 2006-10-13
> BO18451.3prime
ATGGTCTAGAAAGCTTGCGAGCGACTCAATGCTGGACTTCTTGTTCTTGC
TCATGCCAAAGTATCCCCACCAGGAGCGGCGCGACCTCGCCTCGTCGGCT
GGAGCAGCACTGGTGGCCATCGAGGCGGTGGCGTTGCGCACAGCTCCTCG
GGAGGCGGTCGCCAGAGGTTGCTCCGCATTATCCTCATTGCTGCTGACAC
TGGACTCAGGAGGATTGGCAGCGGTGGTACTACGGCGACCGGCGGACTTG
CCGGATTTAGCCGACTTCGCTGACTTCGCTGACTTGGCGGACTTGACGGT
GTCCATGGAGACCTGGGTCACATTGGCCAGGCTGGGCAGTGGGGTGACGC
CTCCATCGCGGGTGCGACGCTGCCGGCGATCGCCTCCACCGAAGAGCTTA
CTCAAATACGGCATGCACATGTCGACTGATAACT
BO18451.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:21:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13010-PA | 405 | CG13010-RA | 1..402 | 420..19 | 2010 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:53:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13010-RA | 681 | CG13010-RA | 103..504 | 420..19 | 2010 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:53:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16678442..16678843 | 19..420 | 2010 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-30 17:53:53 has no hits.
BO18451.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:23:07 Download gff for
BO18451.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13010-PA | 1..405 | 18..420 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:51:39 Download gff for
BO18451.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13010-RA | 99..504 | 19..428 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:06:09 Download gff for
BO18451.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13010-RA | 99..504 | 19..428 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:06:09 Download gff for
BO18451.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16678442..16678847 | 19..428 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:51:39 Download gff for
BO18451.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16572475..16572880 | 19..428 | 99 | | Plus |
BO18451.5prime Sequence
434 bp (434 high quality bases) assembled on 2006-10-13
> BO18451.5prime
GAAGTTATCAGTCGACATGTGCATGCCGTATTTGAGTAAGCTCTTCGGTG
GAGGCGATCGCCGGCAGCGTCGCACCCGCGATGGAGGCGTCACCCCACTG
CCCAGCCTGGCCAATGTGACCCAGGTCTCCATGGACACCGTCAAGTCCGC
CAAGTCAGCGAAGTCAGCGAAGTCGGCTAAATCCGGCAAGTCCGCCGGTC
GCCGTAGTACCACCGCTGCCAATCCTCCTGAGTCCAGTGTCAGCAGCAAT
GAGGATAATGCGGAGCAACCTCTGGCGACCGCCTCCCGAGGAGCTGTGCG
CAACGCCACCGCCTCGATGGCCACCAGTGCTGCTCCAGCCGACGAGGCGA
GGTCGCGCCGCTCCTGGTGGGGATACTTTGGCATGAGCAAGAACAAGAAG
TCCAGCATTGAGTCGCTCGCAAGCTTTCTAGACC
BO18451.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:21:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13010-PA | 405 | CG13010-RA | 1..402 | 17..418 | 2010 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:54:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13010-RA | 681 | CG13010-RA | 103..504 | 17..418 | 2010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:54:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16678442..16678843 | 418..17 | 2010 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-30 17:54:16 has no hits.
BO18451.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:23:07 Download gff for
BO18451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13010-PA | 1..405 | 17..419 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:51:43 Download gff for
BO18451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13010-RA | 99..504 | 9..418 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:06:14 Download gff for
BO18451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13010-RA | 99..504 | 9..418 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:06:14 Download gff for
BO18451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16678442..16678847 | 9..418 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:51:43 Download gff for
BO18451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16572475..16572880 | 9..418 | 99 | | Minus |
BO18451.complete Sequence
436 bp assembled on 2006-10-11
GenBank Submission: FJ634418
> BO18451.complete
GAAGTTATCAGTCGACATGTGCATGCCGTATTTGAGTAAGCTCTTCGGTG
GAGGCGATCGCCGGCAGCGTCGCACCCGCGATGGAGGCGTCACCCCACTG
CCCAGCCTGGCCAATGTGACCCAGGTCTCCATGGACACCGTCAAGTCCGC
CAAGTCAGCGAAGTCAGCGAAGTCGGCTAAATCCGGCAAGTCCGCCGGTC
GCCGTAGTACCACCGCTGCCAATCCTCCTGAGTCCAGTGTCAGCAGCAAT
GAGGATAATGCGGAGCAACCTCTGGCGACCGCCTCCCGAGGAGCTGTGCG
CAACGCCACCGCCTCGATGGCCACCAGTGCTGCTCCAGCCGACGAGGCGA
GGTCGCGCCGCTCCTGGTGGGGATACTTTGGCATGAGCAAGAACAAGAAG
TCCAGCATTGAGTCGCTCGCAAGCTTTCTAGACCAT
BO18451.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:49:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13010-RA | 405 | CG13010-PA | 1..402 | 17..418 | 2010 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:49:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13010-RA | 681 | CG13010-RA | 103..504 | 17..418 | 2010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:49:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16678442..16678843 | 418..17 | 2010 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:49:18 has no hits.
BO18451.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:20:39 Download gff for
BO18451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13010-RA | 1..405 | 17..419 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:39:35 Download gff for
BO18451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13010-RA | 1..405 | 17..419 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:53:22 Download gff for
BO18451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13010-RA | 103..504 | 17..420 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:20:40 Download gff for
BO18451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13010-RA | 1..405 | 17..419 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:05:19 Download gff for
BO18451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13010-RA | 103..504 | 17..420 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:05:19 Download gff for
BO18451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16678440..16678843 | 17..420 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:53:22 Download gff for
BO18451.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16572473..16572876 | 17..420 | 99 | | Minus |
BO18451.pep Sequence
Translation from 16 to 436
> BO18451.pep
MCMPYLSKLFGGGDRRQRRTRDGGVTPLPSLANVTQVSMDTVKSAKSAKS
AKSAKSGKSAGRRSTTAANPPESSVSSNEDNAEQPLATASRGAVRNATAS
MATSAAPADEARSRRSWWGYFGMSKNKKSSIESLASFLDH
BO18451.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:50:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13010-PA | 134 | CG13010-PA | 1..134 | 1..134 | 672 | 100 | Plus |
