Clone Sequence Records
BO18452.5prime Sequence
398 bp (398 high quality bases) assembled on 2006-10-13
> BO18452.5prime
GAAGTTATCAGTCGACATGAAAACCCTCGAGTCCGACGACAAACCCTTCA
ATCCCTTCTACATTGGCCCACATCCCAGCAAGGCGTGTGCCATTCCCGAG
ATTCCCGGCCAGCAATGCTCACCCAACTGTCAGCCAACTACTACGACCAC
CAATGGTTCTCCAACGGATGCAACGGATCCCAACAGTTTGCCCAGCGGAG
CTGCGGGCGGCATGGTAATCGTGGCCAACATATATAGCACCGTCGAGGTC
CTGGCCGCCGCCGCTCGTATGGGCGGAGCAGCGGGCACTGGAGGGGATCA
GGGTGCGTCGTCTTCCAACAACACCACATGCAAGCCGTATCCCTGCATGG
AGGGCGCTCGCATCGATGGTCCTGGCTGTGGTGCAAGCTTTCTAGACC
BO18452.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:21:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15198-PA | 369 | CG15198-RA | 1..366 | 17..382 | 1830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:43:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15198-RA | 650 | CG15198-RA | 173..539 | 16..382 | 1835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:43:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11248408..11248774 | 16..382 | 1835 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-03 06:43:31 has no hits.
BO18452.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:23:08 Download gff for
BO18452.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-PA | 1..369 | 17..383 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:31:02 Download gff for
BO18452.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 167..539 | 9..382 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:38:55 Download gff for
BO18452.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 167..539 | 9..382 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:38:55 Download gff for
BO18452.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11248402..11248774 | 9..382 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:31:02 Download gff for
BO18452.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11142435..11142807 | 9..382 | 99 | | Plus |
BO18452.3prime Sequence
398 bp (398 high quality bases) assembled on 2006-10-13
> BO18452.3prime
ATGGTCTAGAAAGCTTGCACCACAGCCAGGACCATCGATGCGAGCGCCCT
CCATGCAGGGATACGGCTTGCATGTGGTGTTGTTGGAAGACGACGCACCC
TGATCCCCTCCAGTGCCCGCTGCTCCGCCCATACGAGCGGCGGCGGCCAG
GACCTCGACGGTGCTATATATGTTGGCCACGATTACCATGCCGCCCGCAG
CTCCGCTGGGCAAACTGTTGGGATCCGTTGCATCCGTTGGAGAACCATTG
GTGGTCGTAGTAGTTGGCTGACAGTTGGGTGAGCATTGCTGGCCGGGAAT
CTCGGGAATGGCACACGCCTTGCTGGGATGTGGGCCAATGTAGAAGGGAT
TGAAGGGTTTGTCGTCGGACTCGAGGGTTTTCATGTCGACTGATAACT
BO18452.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:21:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15198-PA | 369 | CG15198-RA | 1..366 | 384..19 | 1830 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:10:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15198-RA | 650 | CG15198-RA | 173..539 | 385..19 | 1835 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:10:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11248408..11248774 | 385..19 | 1835 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:10:39 has no hits.
BO18452.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:23:08 Download gff for
BO18452.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-PA | 1..369 | 18..384 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:02:30 Download gff for
BO18452.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 167..539 | 19..392 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:18:36 Download gff for
BO18452.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 167..539 | 19..392 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:18:36 Download gff for
BO18452.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11248402..11248774 | 19..392 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:02:30 Download gff for
BO18452.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11142435..11142807 | 19..392 | 99 | | Minus |
BO18452.complete Sequence
400 bp assembled on 2006-10-11
GenBank Submission: FJ634419
> BO18452.complete
GAAGTTATCAGTCGACATGAAAACCCTCGAGTCCGACGACAAACCCTTCA
ATCCCTTCTACATTGGCCCACATCCCAGCAAGGCGTGTGCCATTCCCGAG
ATTCCCGGCCAGCAATGCTCACCCAACTGTCAGCCAACTACTACGACCAC
CAATGGTTCTCCAACGGATGCAACGGATCCCAACAGTTTGCCCAGCGGAG
CTGCGGGCGGCATGGTAATCGTGGCCAACATATATAGCACCGTCGAGGTC
CTGGCCGCCGCCGCTCGTATGGGCGGAGCAGCGGGCACTGGAGGGGATCA
GGGTGCGTCGTCTTCCAACAACACCACATGCAAGCCGTATCCCTGCATGG
AGGGCGCTCGCATCGATGGTCCTGGCTGTGGTGCAAGCTTTCTAGACCAT
BO18452.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:14:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15198-RA | 369 | CG15198-PA | 1..366 | 17..382 | 1830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:14:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15198-RA | 650 | CG15198-RA | 173..539 | 16..382 | 1835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:14:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11248408..11248774 | 16..382 | 1835 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:14:06 has no hits.
BO18452.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:20:26 Download gff for
BO18452.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 1..369 | 17..383 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:39:15 Download gff for
BO18452.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 1..369 | 17..383 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:16:44 Download gff for
BO18452.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 174..539 | 17..384 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:20:26 Download gff for
BO18452.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 1..369 | 17..383 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:16:28 Download gff for
BO18452.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 174..539 | 17..384 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:16:28 Download gff for
BO18452.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11248409..11248774 | 17..384 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:16:44 Download gff for
BO18452.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11142442..11142807 | 17..384 | 99 | | Plus |
BO18452.pep Sequence
Translation from 16 to 400
> BO18452.pep
MKTLESDDKPFNPFYIGPHPSKACAIPEIPGQQCSPNCQPTTTTTNGSPT
DATDPNSLPSGAAGGMVIVANIYSTVEVLAAAARMGGAAGTGGDQGASSS
NNTTCKPYPCMEGARIDGPGCGASFLDH
BO18452.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:50:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15198-PA | 122 | CG15198-PA | 1..122 | 1..122 | 665 | 100 | Plus |