Clone Sequence Records
BO18462.3prime Sequence
656 bp (656 high quality bases) assembled on 2006-10-13
> BO18462.3prime
ATGGTCTAGAAAGCTTGCATCCTCGGGTTCCGTCTGGGGCACCTCGTTAT
CGGCAGCTGGGTTCACTGGCACCGACTGGCCAATTTGCGACGATGGCGGG
AACAACTGGGCCGCGTGCGTGAGCTTGGCCAGCGCATCCTGATCCAGAAT
CTGTGGCTTGTCCGCGGCACTGGTGTTCGATCTGCTCAGTTGATAGAAGG
CGGTGTCGCTGTGCGTGATGTTCACAATGCTTCCGGTCAGGGGAAGGGTT
TCTAGGAGTTCCTGGGGGCTGCTGAAGGCTCCCAGATTCACGGGTGCGAT
GCCGGTCAGCACTTGACCGGTGACATTGGTCTGGATGGGCAGCGGGATGT
TGCCCAGGTCAATGTGACTCTTGTTGCTGTGCGTGTCGTAGAAGGTCAGA
TCCACGCGTTCCTGGCTCTCAAAACTGGTGTCATTCTCGCCCACCTCCGT
CAGGATGCCGATCTCATAGACCACCGCCTTGACCACATAGAGATTCTTGG
GCGTATCGTTGACGCTGGCCCTCAGCTCCTCGATGGTGGCGTTGTCGATG
CCTGAACTGGCATCCAAAACGGGCAGGGAACAGCCGATGGCCAACAGCAT
GCCGAGCACGGCGGCTCCAAACACAGCCTGGTGGACCTGCATGTCGACTG
ATAACT
BO18462.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:21:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14949-PA | 627 | CG14949-RA | 1..624 | 642..19 | 3120 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:23:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14949-RA | 934 | CG14949-RA | 79..702 | 642..19 | 3120 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:22:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2642416..2642887 | 19..490 | 2360 | 100 | Plus |
| 3L | 28110227 | 3L | 2643195..2643346 | 491..642 | 760 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 16:22:58 has no hits.
BO18462.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:23:17 Download gff for
BO18462.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-PA | 1..627 | 18..642 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:13:20 Download gff for
BO18462.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 79..712 | 8..642 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:46:27 Download gff for
BO18462.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 79..712 | 8..642 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:46:27 Download gff for
BO18462.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2642406..2642887 | 8..490 | 99 | <- | Plus |
| 3L | 2643195..2643346 | 491..642 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:13:20 Download gff for
BO18462.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2642406..2642887 | 8..490 | 99 | <- | Plus |
| arm_3L | 2643195..2643346 | 491..642 | 100 | | Plus |
BO18462.5prime Sequence
656 bp (656 high quality bases) assembled on 2006-10-13
> BO18462.5prime
GAAGTTATCAGTCGACATGCAGGTCCACCAGGCTGTGTTTGGAGCCGCCG
TGCTCGGCATGCTGTTGGCCATCGGCTGTTCCCTGCCCGTTTTGGATGCC
AGTTCAGGCATCGACAACGCCACCATCGAGGAGCTGAGGGCCAGCGTCAA
CGATACGCCCAAGAATCTCTATGTGGTCAAGGCGGTGGTCTATGAGATCG
GCATCCTGACGGAGGTGGGCGAGAATGACACCAGTTTTGAGAGCCAGGAA
CGCGTGGATCTGACCTTCTACGACACGCACAGCAACAAGAGTCACATTGA
CCTGGGCAACATCCCGCTGCCCATCCAGACCAATGTCACCGGTCAAGTGC
TGACCGGCATCGCACCCGTGAATCTGGGAGCCTTCAGCAGCCCCCAGGAA
CTCCTAGAAACCCTTCCCCTGACCGGAAGCATTGTGAACATCACGCACAG
CGACACCGCCTTCTATCAACTGAGCAGATCGAACACCAGTGCCGCGGACA
AGCCACAGATTCTGGATCAGGATGCGCTGGCCAAGCTCACGCACGCGGCC
CAGTTGTTCCCGCCATCGTCGCAAATTGGCCAGTCGGTGCCAGTGAACCC
AGCTGCCGATAACGAGGTGCCCCAGACGGAACCCGAGGATGCAAGCTTTC
TAGACC
BO18462.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:21:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14949-PA | 627 | CG14949-RA | 1..624 | 17..640 | 3120 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:16:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14949-RA | 934 | CG14949-RA | 79..702 | 17..640 | 3120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:16:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2642416..2642887 | 640..169 | 2360 | 100 | Minus |
| 3L | 28110227 | 3L | 2643195..2643346 | 168..17 | 760 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-02 18:16:15 has no hits.
BO18462.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:23:18 Download gff for
BO18462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-PA | 1..627 | 17..641 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:42:00 Download gff for
BO18462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 79..712 | 17..651 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:14:29 Download gff for
BO18462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 79..712 | 17..651 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:14:29 Download gff for
BO18462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2642406..2642887 | 169..651 | 99 | <- | Minus |
| 3L | 2643195..2643346 | 17..168 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:42:00 Download gff for
BO18462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2642406..2642887 | 169..651 | 99 | <- | Minus |
| arm_3L | 2643195..2643346 | 17..168 | 100 | | Minus |
BO18462.complete Sequence
658 bp assembled on 2006-10-11
GenBank Submission: FJ634425
> BO18462.complete
GAAGTTATCAGTCGACATGCAGGTCCACCAGGCTGTGTTTGGAGCCGCCG
TGCTCGGCATGCTGTTGGCCATCGGCTGTTCCCTGCCCGTTTTGGATGCC
AGTTCAGGCATCGACAACGCCACCATCGAGGAGCTGAGGGCCAGCGTCAA
CGATACGCCCAAGAATCTCTATGTGGTCAAGGCGGTGGTCTATGAGATCG
GCATCCTGACGGAGGTGGGCGAGAATGACACCAGTTTTGAGAGCCAGGAA
CGCGTGGATCTGACCTTCTACGACACGCACAGCAACAAGAGTCACATTGA
CCTGGGCAACATCCCGCTGCCCATCCAGACCAATGTCACCGGTCAAGTGC
TGACCGGCATCGCACCCGTGAATCTGGGAGCCTTCAGCAGCCCCCAGGAA
CTCCTAGAAACCCTTCCCCTGACCGGAAGCATTGTGAACATCACGCACAG
CGACACCGCCTTCTATCAACTGAGCAGATCGAACACCAGTGCCGCGGACA
AGCCACAGATTCTGGATCAGGATGCGCTGGCCAAGCTCACGCACGCGGCC
CAGTTGTTCCCGCCATCGTCGCAAATTGGCCAGTCGGTGCCAGTGAACCC
AGCTGCCGATAACGAGGTGCCCCAGACGGAACCCGAGGATGCAAGCTTTC
TAGACCAT
BO18462.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:14:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14949-RA | 627 | CG14949-PA | 1..624 | 17..640 | 3120 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:14:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14949-RA | 934 | CG14949-RA | 79..702 | 17..640 | 3120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:14:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2642416..2642887 | 640..169 | 2360 | 100 | Minus |
| 3L | 28110227 | 3L | 2643195..2643346 | 168..17 | 760 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:14:45 has no hits.
BO18462.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:13:56 Download gff for
BO18462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 1..627 | 17..641 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:32:41 Download gff for
BO18462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 1..627 | 17..641 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:43:41 Download gff for
BO18462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 79..702 | 17..642 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:13:56 Download gff for
BO18462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 1..627 | 17..641 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:48:45 Download gff for
BO18462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 79..702 | 17..642 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:48:45 Download gff for
BO18462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2643195..2643346 | 17..168 | 100 | | Minus |
| 3L | 2642414..2642887 | 169..642 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:43:41 Download gff for
BO18462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2642414..2642887 | 169..642 | 99 | <- | Minus |
| arm_3L | 2643195..2643346 | 17..168 | 100 | | Minus |
BO18462.pep Sequence
Translation from 16 to 658
> BO18462.pep
MQVHQAVFGAAVLGMLLAIGCSLPVLDASSGIDNATIEELRASVNDTPKN
LYVVKAVVYEIGILTEVGENDTSFESQERVDLTFYDTHSNKSHIDLGNIP
LPIQTNVTGQVLTGIAPVNLGAFSSPQELLETLPLTGSIVNITHSDTAFY
QLSRSNTSAADKPQILDQDALAKLTHAAQLFPPSSQIGQSVPVNPAADNE
VPQTEPEDASFLDH
BO18462.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:16:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14949-PA | 208 | CG14949-PA | 1..208 | 1..208 | 1048 | 100 | Plus |
