Clone Sequence Records
BO18528.3prime Sequence
590 bp (590 high quality bases) assembled on 2006-10-13
> BO18528.3prime
ATGGTCTAGAAAGCTTGCCTTCCACACCACAATGGAAATGGTTTCCATTT
CGGGAGCTTCGCATATATACTTAAACAAACTGTTTGGATCCTGTGAGCAG
GGTCTATCGTTTAGCTCAAACTTCCGCGAGTCCTTGTAAATATAGCCAAG
GTGGATGCAGTGCTCCTTCTGCCCAGCATTATCCGGCTGATTCCTTGCCC
ACCTGAGCGAACTAATTCGCTGGGCATTGGTGAACCATCTGTGGCTGCCA
GTCTTGGCCAGATCGTTTCCCGATGTCCAGTACGTCAGCCGTGATCCGTT
GGCCGTCAGGAAAGCCGTAACGGCATCGAACTCCTGGTCCGTTTCGAATG
TGACCAGCTCAGAGTTCAATTCGCGGCATTTCTCGTAGGCCTCGTACCAG
TTCAAGGACTCCGTGCCAAAGAAGTAGTATCCGTCGTTGATTTTGGTAAA
GGGTTCCGCCTTGACGAGCGCACCAAACGTATTTCCTTCGTTTACTTGTA
TGGAGAACTTTTCGCGAGTCCATCCAGTTTTTGCTATGACCAGCAATGTA
ATTAGTAGAACCGTAAGCTTCAGCATGTCGACTGATAACT
BO18528.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:22:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9976-PA | 561 | Lectin-galC1-RA | 1..558 | 576..19 | 2790 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:57:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Lectin-galC1-RB | 702 | CG9976-RB | 14..571 | 576..19 | 2790 | 100 | Minus |
Lectin-galC1-RA | 759 | CG9976-RA | 14..571 | 576..19 | 2790 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:57:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19417618..19418086 | 487..19 | 2345 | 100 | Minus |
2L | 23513712 | 2L | 19417460..19417555 | 576..481 | 465 | 99 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:57:30 has no hits.
BO18528.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:24:11 Download gff for
BO18528.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9976-PA | 1..561 | 18..576 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:43:43 Download gff for
BO18528.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 7..571 | 19..584 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:05:05 Download gff for
BO18528.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 7..571 | 19..584 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:05:05 Download gff for
BO18528.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19417453..19417550 | 486..584 | 96 | -> | Minus |
2L | 19417620..19418086 | 19..485 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:43:43 Download gff for
BO18528.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19417453..19417550 | 486..584 | 96 | -> | Minus |
arm_2L | 19417620..19418086 | 19..485 | 100 | | Minus |
BO18528.5prime Sequence
590 bp (590 high quality bases) assembled on 2006-10-13
> BO18528.5prime
GAAGTTATCAGTCGACATGCTGAAGCTTACGGTTCTACTAATTACATTGC
TGGTCATAGCAAAAACTGGATGGACTCGCGAAAAGTTCTCCATACAAGTA
AACGAAGGAAATACGTTTGGTGCGCTCGTCAAGGCGGAACCCTTTACCAA
AATCAACGACGGATACTACTTCTTTGGCACGGAGTCCTTGAACTGGTACG
AGGCCTACGAGAAATGCCGCGAATTGAACTCTGAGCTGGTCACATTCGAA
ACGGACCAGGAGTTCGATGCCGTTACGGCTTTCCTGACGGCCAACGGATC
ACGGCTGACGTACTGGACATCGGGAAACGATCTGGCCAAGACTGGCAGCC
ACAGATGGTTCACCAATGCCCAGCGAATTAGTTCGCTCAGGTGGGCAAGG
AATCAGCCGGATAATGCTGGGCAGAAGGAGCACTGCATCCACCTTGGCTA
TATTTACAAGGACTCGCGGAAGTTTGAGCTAAACGATAGACCCTGCTCAC
AGGATCCAAACAGTTTGTTTAAGTATATATGCGAAGCTCCCGAAATGGAA
ACCATTTCCATTGTGGTGTGGAAGGCAAGCTTTCTAGACC
BO18528.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:22:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9976-PA | 561 | Lectin-galC1-RA | 1..558 | 17..574 | 2790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:46:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Lectin-galC1-RB | 702 | CG9976-RB | 14..571 | 17..574 | 2790 | 100 | Plus |
Lectin-galC1-RA | 759 | CG9976-RA | 14..571 | 17..574 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:46:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19417618..19418086 | 106..574 | 2345 | 100 | Plus |
2L | 23513712 | 2L | 19417460..19417555 | 17..112 | 465 | 99 | Plus |
Blast to na_te.dros performed on 2015-02-03 06:46:16 has no hits.
BO18528.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:24:11 Download gff for
BO18528.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9976-PA | 1..561 | 17..575 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:31:31 Download gff for
BO18528.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 7..571 | 9..574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:39:20 Download gff for
BO18528.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 7..571 | 9..574 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:39:20 Download gff for
BO18528.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19417453..19417550 | 9..107 | 96 | -> | Plus |
2L | 19417620..19418086 | 108..574 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:31:31 Download gff for
BO18528.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19417620..19418086 | 108..574 | 100 | | Plus |
arm_2L | 19417453..19417550 | 9..107 | 96 | -> | Plus |
BO18528.complete Sequence
592 bp assembled on 2006-10-11
GenBank Submission: FJ634455
> BO18528.complete
GAAGTTATCAGTCGACATGCTGAAGCTTACGGTTCTACTAATTACATTGC
TGGTCATAGCAAAAACTGGATGGACTCGCGAAAAGTTCTCCATACAAGTA
AACGAAGGAAATACGTTTGGTGCGCTCGTCAAGGCGGAACCCTTTACCAA
AATCAACGACGGATACTACTTCTTTGGCACGGAGTCCTTGAACTGGTACG
AGGCCTACGAGAAATGCCGCGAATTGAACTCTGAGCTGGTCACATTCGAA
ACGGACCAGGAGTTCGATGCCGTTACGGCTTTCCTGACGGCCAACGGATC
ACGGCTGACGTACTGGACATCGGGAAACGATCTGGCCAAGACTGGCAGCC
ACAGATGGTTCACCAATGCCCAGCGAATTAGTTCGCTCAGGTGGGCAAGG
AATCAGCCGGATAATGCTGGGCAGAAGGAGCACTGCATCCACCTTGGCTA
TATTTACAAGGACTCGCGGAAGTTTGAGCTAAACGATAGACCCTGCTCAC
AGGATCCAAACAGTTTGTTTAAGTATATATGCGAAGCTCCCGAAATGGAA
ACCATTTCCATTGTGGTGTGGAAGGCAAGCTTTCTAGACCAT
BO18528.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 21:01:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Lectin-galC1-RB | 561 | CG9976-PB | 1..558 | 17..574 | 2790 | 100 | Plus |
Lectin-galC1-RA | 561 | CG9976-PA | 1..558 | 17..574 | 2790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:01:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Lectin-galC1-RB | 702 | CG9976-RB | 14..571 | 17..574 | 2790 | 100 | Plus |
Lectin-galC1-RA | 759 | CG9976-RA | 14..571 | 17..574 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:01:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19417618..19418086 | 106..574 | 2345 | 100 | Plus |
2L | 23513712 | 2L | 19417460..19417555 | 17..112 | 465 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:01:30 has no hits.
BO18528.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:20:03 Download gff for
BO18528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 1..561 | 17..575 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:38:40 Download gff for
BO18528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 7..571 | 9..574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:14:59 Download gff for
BO18528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 14..571 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:20:03 Download gff for
BO18528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 7..571 | 9..574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:33:07 Download gff for
BO18528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 14..571 | 17..576 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:33:07 Download gff for
BO18528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19417460..19417550 | 17..107 | 100 | -> | Plus |
2L | 19417620..19418086 | 108..576 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:14:59 Download gff for
BO18528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19417460..19417550 | 17..107 | 100 | -> | Plus |
arm_2L | 19417620..19418086 | 108..576 | 99 | | Plus |
BO18528.pep Sequence
Translation from 16 to 592
> BO18528.pep
MLKLTVLLITLLVIAKTGWTREKFSIQVNEGNTFGALVKAEPFTKINDGY
YFFGTESLNWYEAYEKCRELNSELVTFETDQEFDAVTAFLTANGSRLTYW
TSGNDLAKTGSHRWFTNAQRISSLRWARNQPDNAGQKEHCIHLGYIYKDS
RKFELNDRPCSQDPNSLFKYICEAPEMETISIVVWKASFLDH
BO18528.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:50:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Lectin-galC1-PB | 186 | CG9976-PB | 1..186 | 1..186 | 999 | 100 | Plus |
Lectin-galC1-PA | 186 | CG9976-PA | 1..186 | 1..186 | 999 | 100 | Plus |
lectin-37Da-PB | 186 | CG33532-PB | 1..186 | 1..186 | 592 | 57.5 | Plus |
lectin-37Da-PA | 186 | CG33532-PA | 1..186 | 1..186 | 592 | 57.5 | Plus |
CG43055-PA | 180 | CG43055-PA | 22..180 | 23..185 | 321 | 39.8 | Plus |