Clone Sequence Records
BO18529.3prime Sequence
825 bp (696 high quality bases) assembled on 2006-10-13
> BO18529.3prime
ATGGTCTAGAAAGCTTGCGTTGCGTTTGACTTTAGTGCTTTGAGTTCTCT
CTCCTTTGAGTAATAACTTTTTAAGCAGCTTATAGATAGTAATTGGCAGT
ACAATTAGCAACAGAACCATTACTACAAAAATAATTAGGAGCACATCAAC
ATTGTGGTACTGCCACCAGTTCAGCCTTTGTGCCGCACTTTTCAAATAGG
CAGCTCCTTGATGGCGGGTCACATGTTCCACCCAGTATATCGCATTTTCA
ATTGGCGTTTGTTGTTGATCCCGATATCGGAAGGATATGCCCTGCACCAC
TTTGGTGTAGGATGGCTCACTTGTAATCCGCTCGATTGCTTTCCGGAATT
CTACGGCATTCAGCGTCTTGAAGTCCAGCATTATGCCATAGCCGTTTTGC
TCGGCATGAGCCATGTTGAAAAACTGATCACTAAAGATCGGCAAACCGAT
CACGGGTTTAGCATGATAAATGGACTCCGTGGTGCTCAGCATGCCGCCGT
GGGTCACAAATGCCATGATCTTGGGATGGGCCAATATGTCCGTCTGTGGA
AACCAGTCGGAAATGTAGACATTCTCCGGTTTGTTGGGCAGGTTATCCAG
CTCAAATTTCCAGAGAACACGCTGTTTGAGCCCACCTAATGCTTTCAGGA
TCTCTTGAACCTTTGATGGGGGTAAGTCCTTGGTCTTGAGATTCGATCCC
ATGGAAAAGTAAATGGCTCCATGTTCTGACTCATTGATGAATCTCTCGAT
CTTCTCGGGCAGGGGATTCCACTTTTCGTCGATATGCATGCCACCCACTT
TCATCATGTTGGGTGAGTGCGGGCG
BO18529.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:22:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6658-PA | 1560 | Ugt86Di-RA | 754..1557 | 822..19 | 3920 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:05:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt86Di-RB | 2556 | CG6658-RB | 807..1610 | 822..19 | 3960 | 99.5 | Minus |
Ugt86Di-RA | 1675 | CG6658-RA | 807..1610 | 822..19 | 3960 | 99.5 | Minus |
Ugt86Da-RA | 1994 | CG18578-RA | 1161..1345 | 573..389 | 250 | 77 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:05:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11151972..11152775 | 19..822 | 3960 | 99.5 | Plus |
3R | 32079331 | 3R | 11158911..11159095 | 573..389 | 250 | 75.7 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:05:17 has no hits.
BO18529.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:24:12 Download gff for
BO18529.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6658-PA | 751..1560 | 18..825 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:22:53 Download gff for
BO18529.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Di-RA | 804..1610 | 19..825 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:06:58 Download gff for
BO18529.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Di-RA | 804..1610 | 19..825 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:06:58 Download gff for
BO18529.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11151972..11152778 | 19..825 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:22:53 Download gff for
BO18529.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6977694..6978500 | 19..825 | 99 | | Plus |
BO18529.5prime Sequence
815 bp (758 high quality bases) assembled on 2006-10-13
> BO18529.5prime
GAAGTTATCAGTCGACATGCGTACGTTCACCTTGATCTTGGGACTATTGT
GCAGCTTGGGATACTCAAGTGGATACAATTACCTGATGGTTCTGAATTCC
GCCGGTCGTTCCCACTTTAATGTGGGACACGCTTTGGCCAAGGGATTGGT
CAAGGCTGGGCATACAATCACCGTAGTGTCCGTCTTTCCTCAGAAAAAAC
CCATTCCTGGTTATACTGATGTAAGTGTGCCAAATGTGATCGAAGTCATG
GGAGGAGACATTGGAGCCTTGTGGGCATCTATCCAAAAGACATATACTCA
GAATCTCATCGATCATTATCAAATGGGATTTCGCATCACCAGAGGCCTTT
TCGAGGACTCCAATTTCCAGGATTTTCTGAAGAGCAACCAAAGCTTTGAT
GCGATCATATGTGAGACTTTCTACAATGATGCCCACTATGGCTTGGCAGA
GCATTTTAATGCTCCACTGATTGGATTGGCCACCGGTGGAGGTCTGACAT
TTATCACAGATATGGTTGGTTCCCCCGCTCCAGCTTCGTTCGTGCCCCAC
ATAATGCTACCCTTTAACGATCACATGTCGCTGTACGAACGCCTTTTGAA
CGTGGCTTTTCTTGGCTATGAAAGAGTTCTACTGGACTACTATTTCTTAC
CGACTCAGGAGAAGTTATACAAGGAGTTCTTTCCGGGCAACAAGAGGTGT
TTCTATAAGATGCGCCGAAATGCCTCCTTGGTGCTCATCAATCAACATGT
TTCACTAAGTTTTCCGCGACCGCACTCACCCAACATGATTGAAGTGGGTG
GCATGCATATCGACC
BO18529.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:22:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6658-PA | 1560 | Ugt86Di-RA | 1..798 | 17..814 | 3990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:10:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt86Di-RB | 2556 | CG6658-RB | 53..851 | 16..814 | 3995 | 100 | Plus |
Ugt86Di-RA | 1675 | CG6658-RA | 53..851 | 16..814 | 3995 | 100 | Plus |
Ugt86Da-RA | 1994 | CG18578-RA | 871..953 | 729..811 | 220 | 84.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:10:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11152731..11153031 | 814..514 | 1505 | 100 | Minus |
3R | 32079331 | 3R | 11153232..11153495 | 516..253 | 1320 | 100 | Minus |
3R | 32079331 | 3R | 11153558..11153797 | 255..16 | 1200 | 100 | Minus |
3R | 32079331 | 3R | 11158621..11158703 | 729..811 | 220 | 84.3 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:10:54 has no hits.
BO18529.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:24:13 Download gff for
BO18529.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6658-PA | 1..798 | 17..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 06:26:22 Download gff for
BO18529.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Di-RA | 43..851 | 5..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:41:21 Download gff for
BO18529.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Di-RA | 43..851 | 5..815 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:41:21 Download gff for
BO18529.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11152730..11153030 | 515..815 | 99 | <- | Minus |
3R | 11153234..11153493 | 255..514 | 100 | <- | Minus |
3R | 11153559..11153806 | 5..254 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 06:26:22 Download gff for
BO18529.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6978452..6978752 | 515..815 | 99 | <- | Minus |
arm_3R | 6978956..6979215 | 255..514 | 100 | <- | Minus |
arm_3R | 6979281..6979528 | 5..254 | 98 | | Minus |
BO18529.complete Sequence
1591 bp assembled on 2006-10-31
GenBank Submission: FJ634456
> BO18529.complete
GAAGTTATCAGTCGACATGCGTACGTTCACCTTGATCTTGGGACTATTGT
GCAGCTTGGGATACTCAAGTGGATACAATTACCTGATGGTTCTGAATTCC
GCCGGTCGTTCCCACTTTAATGTGGGACACGCTTTGGCCAAGGGATTGGT
CAAGGCTGGGCATACAATCACCGTAGTGTCCGTCTTTCCTCAGAAAAAAC
CCATTCCTGGTTATACTGATGTAAGTGTGCCAAATGTGATCGAAGTCATG
GGAGGAGACATTGGAGCCTTGTGGGCATCTATCCAAAAGACATATACTCA
GAATCTCATCGATCATTATCAAATGGGATTTCGCATCACCAGAGGCCTTT
TCGAGGACTCCAATTTCCAGGATTTTCTGAAGAGCAACCAAAGCTTTGAT
GCGATCATATGTGAGACTTTCTACAATGATGCCCACTATGGCTTGGCAGA
GCATTTTAATGCTCCACTGATTGGATTGGCCACCGGTGGAGGTCTGACAT
TTATCACAGATATGGTTGGTTCCCCCGCTCCAGCTTCGTTCGTGCCCCAC
ATAATGCTACCCTTTAACGATCACATGTCGCTGTACGAACGCCTTTTGAA
CGTGGCTTTTCTTGGCTATGAAAGAGTTCTACTGGACTACTATTTCTTAC
CGACTCAGGAGAAGTTATACAAGGAGTTCTTTCCGGGCAACAAGAGGTGT
TTCTATAAGATGCGCCGAAATGCCTCCTTGGTGCTCATCAATCAACATGT
TTCACTAAGTTTTCCGCGACCGCACTCACCCAACATGATTGAAGTGGGTG
GCATGCATATCGACGGAAAGTGGAATCCCCTGCCCGAGAAGATCGAGAGA
TTCATCAATGAGTCAGAACATGGAGCCATTTACTTTTCCATGGGATCGAA
TCTCAAGACCAAGGACTTACCCCCATCAAAGGTTCAAGAGATCCTGAAAG
CATTAGGTGGGCTCAAACAGCGTGTTCTCTGGAAATTTGAGCTGGATAAC
CTGCCCAACAAACCGGAGAATGTCTACATTTCCGACTGGTTTCCACAGAC
GGACATATTGGCCCATCCCAAGATCATGGCATTTGTGACCCACGGCGGCA
TGCTGAGCACCACGGAGTCCATTTATCATGCTAAACCCGTGATCGGTTTG
CCGATCTTTAGTGATCAGTTTTTCAACATGGCTCATGCCGAGCAAAACGG
CTATGGCATAATGCTGGACTTCAAGACGCTGAATGCCGTAGAATTCCGGA
AAGCAATCGAGCGGATTACAAGTGAGCCATCCTACACCAAAGTGGTGCAG
GGCATATCCTTCCGATATCGGGATCAACAACAAACGCCAATTGAAAATGC
GATATACTGGGTGGAACATGTGACCCGCCATCAAGGAGCTGCCTATTTGA
AAAGTGCGGCACAAAGGCTGAACTGGTGGCAGTACCACAATGTTGATGTG
CTCCTAATTATTTTTGTAGTAATGGTTCTGTTGCTAATTGTACTGCCAAT
TACTATCTATAAGCTGCTTAAAAAGTTATTACTCAAAGGAGAGAGAACTC
AAAGCACTAAAGTCAAACGCAACGCAAGCTTTCTAGACCAT
BO18529.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:36:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt86Di-RB | 1560 | CG6658-PB | 1..1557 | 17..1573 | 7770 | 99.9 | Plus |
Ugt86Di-RA | 1560 | CG6658-PA | 1..1557 | 17..1573 | 7770 | 99.9 | Plus |
Ugt86Da-RA | 1587 | CG18578-PA | 1018..1202 | 1019..1203 | 250 | 75.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:36:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt86Di-RB | 2556 | CG6658-RB | 53..1610 | 16..1573 | 7775 | 99.9 | Plus |
Ugt86Di-RA | 1675 | CG6658-RA | 53..1610 | 16..1573 | 7775 | 99.9 | Plus |
Ugt86Da-RA | 1994 | CG18578-RA | 1161..1345 | 1019..1203 | 250 | 75.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:36:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11151972..11153031 | 1573..514 | 5285 | 99.9 | Minus |
3R | 32079331 | 3R | 11153232..11153495 | 516..253 | 1320 | 100 | Minus |
3R | 32079331 | 3R | 11153558..11153797 | 255..16 | 1200 | 100 | Minus |
3R | 32079331 | 3R | 11158911..11159095 | 1019..1203 | 250 | 75.7 | Plus |
3R | 32079331 | 3R | 11158621..11158703 | 729..811 | 220 | 84.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:36:21 has no hits.
BO18529.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:14:01 Download gff for
BO18529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Di-RA | 1..1560 | 17..1574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:32:47 Download gff for
BO18529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Di-RA | 1..1560 | 17..1574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:48:06 Download gff for
BO18529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Di-RA | 54..1610 | 17..1575 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:01 Download gff for
BO18529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Di-RA | 1..1560 | 17..1574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:49:27 Download gff for
BO18529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt86Di-RA | 54..1610 | 17..1575 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:49:27 Download gff for
BO18529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11151970..11153030 | 515..1575 | 99 | <- | Minus |
3R | 11153234..11153493 | 255..514 | 100 | <- | Minus |
3R | 11153559..11153796 | 17..254 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:48:06 Download gff for
BO18529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6977692..6978752 | 515..1575 | 99 | <- | Minus |
arm_3R | 6978956..6979215 | 255..514 | 100 | <- | Minus |
arm_3R | 6979281..6979518 | 17..254 | 100 | | Minus |
BO18529.pep Sequence
Translation from 16 to 1591
> BO18529.pep
MRTFTLILGLLCSLGYSSGYNYLMVLNSAGRSHFNVGHALAKGLVKAGHT
ITVVSVFPQKKPIPGYTDVSVPNVIEVMGGDIGALWASIQKTYTQNLIDH
YQMGFRITRGLFEDSNFQDFLKSNQSFDAIICETFYNDAHYGLAEHFNAP
LIGLATGGGLTFITDMVGSPAPASFVPHIMLPFNDHMSLYERLLNVAFLG
YERVLLDYYFLPTQEKLYKEFFPGNKRCFYKMRRNASLVLINQHVSLSFP
RPHSPNMIEVGGMHIDGKWNPLPEKIERFINESEHGAIYFSMGSNLKTKD
LPPSKVQEILKALGGLKQRVLWKFELDNLPNKPENVYISDWFPQTDILAH
PKIMAFVTHGGMLSTTESIYHAKPVIGLPIFSDQFFNMAHAEQNGYGIML
DFKTLNAVEFRKAIERITSEPSYTKVVQGISFRYRDQQQTPIENAIYWVE
HVTRHQGAAYLKSAAQRLNWWQYHNVDVLLIIFVVMVLLLIVLPITIYKL
LKKLLLKGERTQSTKVKRNASFLDH
BO18529.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:16:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt86Di-PB | 519 | CG6658-PB | 1..519 | 1..519 | 2735 | 100 | Plus |
Ugt86Di-PA | 519 | CG6658-PA | 1..519 | 1..519 | 2735 | 100 | Plus |
Ugt86Da-PA | 528 | CG18578-PA | 7..528 | 2..519 | 1485 | 54.4 | Plus |
Ugt86Dc-PA | 521 | CG4739-PA | 9..506 | 7..497 | 1381 | 53.4 | Plus |
Ugt35b-PA | 516 | CG6649-PA | 42..503 | 42..500 | 988 | 44.3 | Plus |