Clone BO18529 Report

Search the DGRC for BO18529

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:185
Well:29
Vector:pDNR-Dual
Associated Gene/TranscriptUgt86Di-RA
Protein status:BO18529.pep: validated full length
Sequenced Size:1591

Clone Sequence Records

BO18529.3prime Sequence

825 bp (696 high quality bases) assembled on 2006-10-13

> BO18529.3prime
ATGGTCTAGAAAGCTTGCGTTGCGTTTGACTTTAGTGCTTTGAGTTCTCT
CTCCTTTGAGTAATAACTTTTTAAGCAGCTTATAGATAGTAATTGGCAGT
ACAATTAGCAACAGAACCATTACTACAAAAATAATTAGGAGCACATCAAC
ATTGTGGTACTGCCACCAGTTCAGCCTTTGTGCCGCACTTTTCAAATAGG
CAGCTCCTTGATGGCGGGTCACATGTTCCACCCAGTATATCGCATTTTCA
ATTGGCGTTTGTTGTTGATCCCGATATCGGAAGGATATGCCCTGCACCAC
TTTGGTGTAGGATGGCTCACTTGTAATCCGCTCGATTGCTTTCCGGAATT
CTACGGCATTCAGCGTCTTGAAGTCCAGCATTATGCCATAGCCGTTTTGC
TCGGCATGAGCCATGTTGAAAAACTGATCACTAAAGATCGGCAAACCGAT
CACGGGTTTAGCATGATAAATGGACTCCGTGGTGCTCAGCATGCCGCCGT
GGGTCACAAATGCCATGATCTTGGGATGGGCCAATATGTCCGTCTGTGGA
AACCAGTCGGAAATGTAGACATTCTCCGGTTTGTTGGGCAGGTTATCCAG
CTCAAATTTCCAGAGAACACGCTGTTTGAGCCCACCTAATGCTTTCAGGA
TCTCTTGAACCTTTGATGGGGGTAAGTCCTTGGTCTTGAGATTCGATCCC
ATGGAAAAGTAAATGGCTCCATGTTCTGACTCATTGATGAATCTCTCGAT
CTTCTCGGGCAGGGGATTCCACTTTTCGTCGATATGCATGCCACCCACTT
TCATCATGTTGGGTGAGTGCGGGCG

BO18529.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:22:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG6658-PA 1560 Ugt86Di-RA 754..1557 822..19 3920 99.5 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:05:22
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt86Di-RB 2556 CG6658-RB 807..1610 822..19 3960 99.5 Minus
Ugt86Di-RA 1675 CG6658-RA 807..1610 822..19 3960 99.5 Minus
Ugt86Da-RA 1994 CG18578-RA 1161..1345 573..389 250 77 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:05:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11151972..11152775 19..822 3960 99.5 Plus
3R 32079331 3R 11158911..11159095 573..389 250 75.7 Minus
Blast to na_te.dros performed on 2015-02-10 17:05:17 has no hits.

BO18529.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:24:12 Download gff for BO18529.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6658-PA 751..1560 18..825 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:22:53 Download gff for BO18529.3prime
Subject Subject Range Query Range Percent Splice Strand
Ugt86Di-RA 804..1610 19..825 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:06:58 Download gff for BO18529.3prime
Subject Subject Range Query Range Percent Splice Strand
Ugt86Di-RA 804..1610 19..825 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:06:58 Download gff for BO18529.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 11151972..11152778 19..825 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:22:53 Download gff for BO18529.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6977694..6978500 19..825 99   Plus

BO18529.5prime Sequence

815 bp (758 high quality bases) assembled on 2006-10-13

> BO18529.5prime
GAAGTTATCAGTCGACATGCGTACGTTCACCTTGATCTTGGGACTATTGT
GCAGCTTGGGATACTCAAGTGGATACAATTACCTGATGGTTCTGAATTCC
GCCGGTCGTTCCCACTTTAATGTGGGACACGCTTTGGCCAAGGGATTGGT
CAAGGCTGGGCATACAATCACCGTAGTGTCCGTCTTTCCTCAGAAAAAAC
CCATTCCTGGTTATACTGATGTAAGTGTGCCAAATGTGATCGAAGTCATG
GGAGGAGACATTGGAGCCTTGTGGGCATCTATCCAAAAGACATATACTCA
GAATCTCATCGATCATTATCAAATGGGATTTCGCATCACCAGAGGCCTTT
TCGAGGACTCCAATTTCCAGGATTTTCTGAAGAGCAACCAAAGCTTTGAT
GCGATCATATGTGAGACTTTCTACAATGATGCCCACTATGGCTTGGCAGA
GCATTTTAATGCTCCACTGATTGGATTGGCCACCGGTGGAGGTCTGACAT
TTATCACAGATATGGTTGGTTCCCCCGCTCCAGCTTCGTTCGTGCCCCAC
ATAATGCTACCCTTTAACGATCACATGTCGCTGTACGAACGCCTTTTGAA
CGTGGCTTTTCTTGGCTATGAAAGAGTTCTACTGGACTACTATTTCTTAC
CGACTCAGGAGAAGTTATACAAGGAGTTCTTTCCGGGCAACAAGAGGTGT
TTCTATAAGATGCGCCGAAATGCCTCCTTGGTGCTCATCAATCAACATGT
TTCACTAAGTTTTCCGCGACCGCACTCACCCAACATGATTGAAGTGGGTG
GCATGCATATCGACC

BO18529.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:22:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG6658-PA 1560 Ugt86Di-RA 1..798 17..814 3990 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:10:57
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt86Di-RB 2556 CG6658-RB 53..851 16..814 3995 100 Plus
Ugt86Di-RA 1675 CG6658-RA 53..851 16..814 3995 100 Plus
Ugt86Da-RA 1994 CG18578-RA 871..953 729..811 220 84.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:10:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11152731..11153031 814..514 1505 100 Minus
3R 32079331 3R 11153232..11153495 516..253 1320 100 Minus
3R 32079331 3R 11153558..11153797 255..16 1200 100 Minus
3R 32079331 3R 11158621..11158703 729..811 220 84.3 Plus
Blast to na_te.dros performed on 2015-02-10 21:10:54 has no hits.

BO18529.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:24:13 Download gff for BO18529.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6658-PA 1..798 17..815 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 06:26:22 Download gff for BO18529.5prime
Subject Subject Range Query Range Percent Splice Strand
Ugt86Di-RA 43..851 5..815 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:41:21 Download gff for BO18529.5prime
Subject Subject Range Query Range Percent Splice Strand
Ugt86Di-RA 43..851 5..815 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:41:21 Download gff for BO18529.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11152730..11153030 515..815 99 <- Minus
3R 11153234..11153493 255..514 100 <- Minus
3R 11153559..11153806 5..254 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 06:26:22 Download gff for BO18529.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6978452..6978752 515..815 99 <- Minus
arm_3R 6978956..6979215 255..514 100 <- Minus
arm_3R 6979281..6979528 5..254 98   Minus

BO18529.complete Sequence

1591 bp assembled on 2006-10-31

GenBank Submission: FJ634456

> BO18529.complete
GAAGTTATCAGTCGACATGCGTACGTTCACCTTGATCTTGGGACTATTGT
GCAGCTTGGGATACTCAAGTGGATACAATTACCTGATGGTTCTGAATTCC
GCCGGTCGTTCCCACTTTAATGTGGGACACGCTTTGGCCAAGGGATTGGT
CAAGGCTGGGCATACAATCACCGTAGTGTCCGTCTTTCCTCAGAAAAAAC
CCATTCCTGGTTATACTGATGTAAGTGTGCCAAATGTGATCGAAGTCATG
GGAGGAGACATTGGAGCCTTGTGGGCATCTATCCAAAAGACATATACTCA
GAATCTCATCGATCATTATCAAATGGGATTTCGCATCACCAGAGGCCTTT
TCGAGGACTCCAATTTCCAGGATTTTCTGAAGAGCAACCAAAGCTTTGAT
GCGATCATATGTGAGACTTTCTACAATGATGCCCACTATGGCTTGGCAGA
GCATTTTAATGCTCCACTGATTGGATTGGCCACCGGTGGAGGTCTGACAT
TTATCACAGATATGGTTGGTTCCCCCGCTCCAGCTTCGTTCGTGCCCCAC
ATAATGCTACCCTTTAACGATCACATGTCGCTGTACGAACGCCTTTTGAA
CGTGGCTTTTCTTGGCTATGAAAGAGTTCTACTGGACTACTATTTCTTAC
CGACTCAGGAGAAGTTATACAAGGAGTTCTTTCCGGGCAACAAGAGGTGT
TTCTATAAGATGCGCCGAAATGCCTCCTTGGTGCTCATCAATCAACATGT
TTCACTAAGTTTTCCGCGACCGCACTCACCCAACATGATTGAAGTGGGTG
GCATGCATATCGACGGAAAGTGGAATCCCCTGCCCGAGAAGATCGAGAGA
TTCATCAATGAGTCAGAACATGGAGCCATTTACTTTTCCATGGGATCGAA
TCTCAAGACCAAGGACTTACCCCCATCAAAGGTTCAAGAGATCCTGAAAG
CATTAGGTGGGCTCAAACAGCGTGTTCTCTGGAAATTTGAGCTGGATAAC
CTGCCCAACAAACCGGAGAATGTCTACATTTCCGACTGGTTTCCACAGAC
GGACATATTGGCCCATCCCAAGATCATGGCATTTGTGACCCACGGCGGCA
TGCTGAGCACCACGGAGTCCATTTATCATGCTAAACCCGTGATCGGTTTG
CCGATCTTTAGTGATCAGTTTTTCAACATGGCTCATGCCGAGCAAAACGG
CTATGGCATAATGCTGGACTTCAAGACGCTGAATGCCGTAGAATTCCGGA
AAGCAATCGAGCGGATTACAAGTGAGCCATCCTACACCAAAGTGGTGCAG
GGCATATCCTTCCGATATCGGGATCAACAACAAACGCCAATTGAAAATGC
GATATACTGGGTGGAACATGTGACCCGCCATCAAGGAGCTGCCTATTTGA
AAAGTGCGGCACAAAGGCTGAACTGGTGGCAGTACCACAATGTTGATGTG
CTCCTAATTATTTTTGTAGTAATGGTTCTGTTGCTAATTGTACTGCCAAT
TACTATCTATAAGCTGCTTAAAAAGTTATTACTCAAAGGAGAGAGAACTC
AAAGCACTAAAGTCAAACGCAACGCAAGCTTTCTAGACCAT

BO18529.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:36:22
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt86Di-RB 1560 CG6658-PB 1..1557 17..1573 7770 99.9 Plus
Ugt86Di-RA 1560 CG6658-PA 1..1557 17..1573 7770 99.9 Plus
Ugt86Da-RA 1587 CG18578-PA 1018..1202 1019..1203 250 75.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:36:23
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt86Di-RB 2556 CG6658-RB 53..1610 16..1573 7775 99.9 Plus
Ugt86Di-RA 1675 CG6658-RA 53..1610 16..1573 7775 99.9 Plus
Ugt86Da-RA 1994 CG18578-RA 1161..1345 1019..1203 250 75.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:36:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11151972..11153031 1573..514 5285 99.9 Minus
3R 32079331 3R 11153232..11153495 516..253 1320 100 Minus
3R 32079331 3R 11153558..11153797 255..16 1200 100 Minus
3R 32079331 3R 11158911..11159095 1019..1203 250 75.7 Plus
3R 32079331 3R 11158621..11158703 729..811 220 84.3 Plus
Blast to na_te.dros performed on 2014-11-27 06:36:21 has no hits.

BO18529.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:14:01 Download gff for BO18529.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt86Di-RA 1..1560 17..1574 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:32:47 Download gff for BO18529.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt86Di-RA 1..1560 17..1574 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:48:06 Download gff for BO18529.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt86Di-RA 54..1610 17..1575 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:14:01 Download gff for BO18529.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt86Di-RA 1..1560 17..1574 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:49:27 Download gff for BO18529.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt86Di-RA 54..1610 17..1575 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:49:27 Download gff for BO18529.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11151970..11153030 515..1575 99 <- Minus
3R 11153234..11153493 255..514 100 <- Minus
3R 11153559..11153796 17..254 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:48:06 Download gff for BO18529.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6977692..6978752 515..1575 99 <- Minus
arm_3R 6978956..6979215 255..514 100 <- Minus
arm_3R 6979281..6979518 17..254 100   Minus

BO18529.pep Sequence

Translation from 16 to 1591

> BO18529.pep
MRTFTLILGLLCSLGYSSGYNYLMVLNSAGRSHFNVGHALAKGLVKAGHT
ITVVSVFPQKKPIPGYTDVSVPNVIEVMGGDIGALWASIQKTYTQNLIDH
YQMGFRITRGLFEDSNFQDFLKSNQSFDAIICETFYNDAHYGLAEHFNAP
LIGLATGGGLTFITDMVGSPAPASFVPHIMLPFNDHMSLYERLLNVAFLG
YERVLLDYYFLPTQEKLYKEFFPGNKRCFYKMRRNASLVLINQHVSLSFP
RPHSPNMIEVGGMHIDGKWNPLPEKIERFINESEHGAIYFSMGSNLKTKD
LPPSKVQEILKALGGLKQRVLWKFELDNLPNKPENVYISDWFPQTDILAH
PKIMAFVTHGGMLSTTESIYHAKPVIGLPIFSDQFFNMAHAEQNGYGIML
DFKTLNAVEFRKAIERITSEPSYTKVVQGISFRYRDQQQTPIENAIYWVE
HVTRHQGAAYLKSAAQRLNWWQYHNVDVLLIIFVVMVLLLIVLPITIYKL
LKKLLLKGERTQSTKVKRNASFLDH

BO18529.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt86Di-PB 519 CG6658-PB 1..519 1..519 2735 100 Plus
Ugt86Di-PA 519 CG6658-PA 1..519 1..519 2735 100 Plus
Ugt86Da-PA 528 CG18578-PA 7..528 2..519 1485 54.4 Plus
Ugt86Dc-PA 521 CG4739-PA 9..506 7..497 1381 53.4 Plus
Ugt35b-PA 516 CG6649-PA 42..503 42..500 988 44.3 Plus