Clone Sequence Records
BO18565.3prime Sequence
650 bp (650 high quality bases) assembled on 2006-10-13
> BO18565.3prime
ATGGTCTAGAAAGCTTGCAGCATGCTCCTGTTTAATACCACCTATCAGGT
AGTCGATGCTAAAGTTACTCTTGGTATTCTCCTCCGGAACTCTCCTTGAG
GATACTAGCGGGTGGTCTTCCTGCTTGACCAGCTGCTTCAGATGATTCAA
ATAGACCCTGGCACGCAGACTCTGTTCGGCGATCTTGAGGTGCTCATCGG
AGCACTCCTTGTACTGCTGTTCGATCTGCAGGTCATCGAACTTCTTCTTC
CGTCGACTCATCCTGCAGGCAATTGTGTTCTTGTTGCGGCGCTCCTGATC
CTTCGGTGAACGCTCCTTCTTCGGGAATTTTCGCACCATATTGACGTGGT
ACTTGAAGATGTCTTGGATGGCCTCGGTTATGATGGGGCTGGCGGATTGG
TAGGAAACGCTTGAGGATGAGGATCCCAAACGACGACGCTTTGGCAGTGG
AGGAAAGTCAGCATCCTGATCACTGAAACCCAAGCTGACGGACTGATTTG
CCGCATCGAAAGGACTCCGACTGGTGCAGGGTGTGCCGCTCCGGGAGATT
AGCTCTTCCTTCAGCTGCAAATCGCATTTCTCAATCTTTCGACCCATGTC
GAACTTTTTGTGGCGATAGATCTGATGGTGCTCCATGTCGACTGATAACT
BO18565.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:23:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15479-PA | 621 | CG15479-RA | 1..618 | 636..19 | 3090 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:16:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15479-RA | 863 | CG15479-RA | 66..683 | 636..19 | 3090 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:15:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13233978..13234595 | 19..636 | 3090 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:16:01 has no hits.
BO18565.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:24:46 Download gff for
BO18565.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-PA | 1..621 | 18..636 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 06:27:19 Download gff for
BO18565.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 60..683 | 19..644 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:50:43 Download gff for
BO18565.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 60..683 | 19..644 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:50:43 Download gff for
BO18565.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13233978..13234601 | 19..644 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 06:27:19 Download gff for
BO18565.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13233978..13234601 | 19..644 | 99 | | Plus |
BO18565.5prime Sequence
650 bp (650 high quality bases) assembled on 2006-10-13
> BO18565.5prime
GAAGTTATCAGTCGACATGGAGCACCATCAGATCTATCGCCACAAAAAGT
TCGACATGGGTCGAAAGATTGAGAAATGCGATTTGCAGCTGAAGGAAGAG
CTAATCTCCCGGAGCGGCACACCCTGCACCAGTCGGAGTCCTTTCGATGC
GGCAAATCAGTCCGTCAGCTTGGGTTTCAGTGATCAGGATGCTGACTTTC
CTCCACTGCCAAAGCGTCGTCGTTTGGGATCCTCATCCTCAAGCGTTTCC
TACCAATCCGCCAGCCCCATCATAACCGAGGCCATCCAAGACATCTTCAA
GTACCACGTCAATATGGTGCGAAAATTCCCGAAGAAGGAGCGTTCACCGA
AGGATCAGGAGCGCCGCAACAAGAACACAATTGCCTGCAGGATGAGTCGA
CGGAAGAAGAAGTTCGATGACCTGCAGATCGAACAGCAGTACAAGGAGTG
CTCCGATGAGCACCTCAAGATCGCCGAACAGAGTCTGCGTGCCAGGGTCT
ATTTGAATCATCTGAAGCAGCTGGTCAAGCAGGAAGACCACCCGCTAGTA
TCCTCAAGGAGAGTTCCGGAGGAGAATACCAAGAGTAACTTTAGCATCGA
CTACCTGATAGGTGGTATTAAACAGGAGCATGCTGCAAGCTTTCTAGACC
BO18565.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:23:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15479-PA | 621 | CG15479-RA | 1..618 | 17..634 | 3090 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:12:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15479-RA | 863 | CG15479-RA | 66..683 | 17..634 | 3090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:12:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13233978..13234595 | 634..17 | 3090 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:12:30 has no hits.
BO18565.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:24:46 Download gff for
BO18565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-PA | 1..621 | 17..635 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:03:33 Download gff for
BO18565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 60..683 | 9..634 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:24:25 Download gff for
BO18565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 60..683 | 9..634 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:24:25 Download gff for
BO18565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13233978..13234601 | 9..634 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:03:33 Download gff for
BO18565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13233978..13234601 | 9..634 | 99 | | Minus |
BO18565.complete Sequence
652 bp assembled on 2006-10-11
GenBank Submission: FJ634475
> BO18565.complete
GAAGTTATCAGTCGACATGGAGCACCATCAGATCTATCGCCACAAAAAGT
TCGACATGGGTCGAAAGATTGAGAAATGCGATTTGCAGCTGAAGGAAGAG
CTAATCTCCCGGAGCGGCACACCCTGCACCAGTCGGAGTCCTTTCGATGC
GGCAAATCAGTCCGTCAGCTTGGGTTTCAGTGATCAGGATGCTGACTTTC
CTCCACTGCCAAAGCGTCGTCGTTTGGGATCCTCATCCTCAAGCGTTTCC
TACCAATCCGCCAGCCCCATCATAACCGAGGCCATCCAAGACATCTTCAA
GTACCACGTCAATATGGTGCGAAAATTCCCGAAGAAGGAGCGTTCACCGA
AGGATCAGGAGCGCCGCAACAAGAACACAATTGCCTGCAGGATGAGTCGA
CGGAAGAAGAAGTTCGATGACCTGCAGATCGAACAGCAGTACAAGGAGTG
CTCCGATGAGCACCTCAAGATCGCCGAACAGAGTCTGCGTGCCAGGGTCT
ATTTGAATCATCTGAAGCAGCTGGTCAAGCAGGAAGACCACCCGCTAGTA
TCCTCAAGGAGAGTTCCGGAGGAGAATACCAAGAGTAACTTTAGCATCGA
CTACCTGATAGGTGGTATTAAACAGGAGCATGCTGCAAGCTTTCTAGACC
AT
BO18565.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:38:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15479-RA | 621 | CG15479-PA | 1..618 | 17..634 | 3090 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:38:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15479-RA | 863 | CG15479-RA | 66..683 | 17..634 | 3090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:38:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13233978..13234595 | 634..17 | 3090 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:38:47 has no hits.
BO18565.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:13:52 Download gff for
BO18565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 1..621 | 17..635 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:32:35 Download gff for
BO18565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 33..656 | 9..634 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:03:16 Download gff for
BO18565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 66..683 | 17..636 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:13:52 Download gff for
BO18565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 33..656 | 9..634 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:08 Download gff for
BO18565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 66..683 | 17..636 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:08 Download gff for
BO18565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13233976..13234595 | 17..636 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:03:16 Download gff for
BO18565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13233976..13234595 | 17..636 | 99 | | Minus |
BO18565.pep Sequence
Translation from 16 to 652
> BO18565.pep
MEHHQIYRHKKFDMGRKIEKCDLQLKEELISRSGTPCTSRSPFDAANQSV
SLGFSDQDADFPPLPKRRRLGSSSSSVSYQSASPIITEAIQDIFKYHVNM
VRKFPKKERSPKDQERRNKNTIACRMSRRKKKFDDLQIEQQYKECSDEHL
KIAEQSLRARVYLNHLKQLVKQEDHPLVSSRRVPEENTKSNFSIDYLIGG
IKQEHAASFLDH
BO18565.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:16:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15479-PA | 206 | CG15479-PA | 1..206 | 1..206 | 1069 | 100 | Plus |
| CG16815-PB | 192 | CG16815-PB | 1..151 | 1..168 | 175 | 29 | Plus |
