Clone Sequence Records
BO18569.3prime Sequence
605 bp (605 high quality bases) assembled on 2006-10-13
> BO18569.3prime
ATGGTCTAGAAAGCTTGCCAGGATTCGCCCAAAATATCGCACATTCTTTT
TATCCAAATAGCGCGTGGCCAACGCCGGCCAGTGGACCACAAAGAGGTCC
GCCAGCGGAAGGAGCAGGCGTCCGCTCAGCGACAGCGTCTCCACGCGGCA
GAAGCTCTCCACGAACACTATTCTGGAGTGCGAGGGCAGGCGTCCGAGGA
GGCGCCACAGATAGGCGGCATAGCAGAAGGGCACACAGGTGCCGGGTCCA
TTGCAGAGGATCAGTTGGGGGCGATCACGCCAGACCAGATAGCAGCTCCA
GAGAAGCGCCCACAGGCTGGTGAAGATGCTGCTTAGCCAGGATTGGCCCA
CGTCGCGGCTGCGCGGCACCTTCACGAATTCCGCCCTCTGGGCAGCCTGC
GGCAGGACCTGCCTGAACTGGCGCTCGGAGGTAGAGTCACTGTTGGCCAG
GATCAGTCTAATTGGCTGGTACTTCTCCGTCTGTTCGATGTCTGTCTGTT
GCAGCAGCGCCTGGGTCAGCCGGCACATCTCCGCCGTGTGGCCGCCAGAG
CCCAGTATTACGTAGGTGGGGTGAGGCGAGCTGGTCGTCATGTCGACTGA
TAACT
BO18569.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:23:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6308-PA | 576 | CG6308-RA | 1..573 | 591..19 | 2865 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:16:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6308-RA | 696 | CG6308-RA | 80..652 | 591..19 | 2865 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:16:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15472243..15472815 | 591..19 | 2865 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:16:29 has no hits.
BO18569.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:24:50 Download gff for
BO18569.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6308-PA | 1..576 | 15..591 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 06:27:25 Download gff for
BO18569.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6308-RA | 80..655 | 15..591 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:52:01 Download gff for
BO18569.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6308-RA | 80..655 | 15..591 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:52:01 Download gff for
BO18569.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15472243..15472818 | 15..591 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 06:27:25 Download gff for
BO18569.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15366276..15366851 | 15..591 | 99 | | Minus |
BO18569.5prime Sequence
605 bp (605 high quality bases) assembled on 2006-10-13
> BO18569.5prime
GAAGTTATCAGTCGACATGACGACCAGCTCGCCTCACCCCACCTACGTAA
TACTGGGCTCTGGCGGCCACACGGCGGAGATGTGCCGGCTGACCCAGGCG
CTGCTGCAACAGACAGACATCGAACAGACGGAGAAGTACCAGCCAATTAG
ACTGATCCTGGCCAACAGTGACTCTACCTCCGAGCGCCAGTTCAGGCAGG
TCCTGCCGCAGGCTGCCCAGAGGGCGGAATTCGTGAAGGTGCCGCGCAGC
CGCGACGTGGGCCAATCCTGGCTAAGCAGCATCTTCACCAGCCTGTGGGC
GCTTCTCTGGAGCTGCTATCTGGTCTGGCGTGATCGCCCCCAACTGATCC
TCTGCAATGGACCCGGCACCTGTGTGCCCTTCTGCTATGCCGCCTATCTG
TGGCGCCTCCTCGGACGCCTGCCCTCGCACTCCAGAATAGTGTTCGTGGA
GAGCTTCTGCCGCGTGGAGACGCTGTCGCTGAGCGGACGCCTGCTCCTTC
CGCTGGCGGACCTCTTTGTGGTCCACTGGCCGGCGTTGGCCACGCGCTAT
TTGGATAAAAAGAATGTGCGATATTTTGGGCGAATCCTGGCAAGCTTTCT
AGACC
BO18569.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:23:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6308-PA | 576 | CG6308-RA | 1..573 | 17..589 | 2865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:08:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6308-RA | 696 | CG6308-RA | 80..652 | 17..589 | 2865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:08:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15472243..15472815 | 17..589 | 2865 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-08 12:08:45 has no hits.
BO18569.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:24:51 Download gff for
BO18569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6308-PA | 1..576 | 17..593 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:40:09 Download gff for
BO18569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6308-RA | 80..655 | 17..593 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:44:52 Download gff for
BO18569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6308-RA | 80..655 | 17..593 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:44:52 Download gff for
BO18569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15472243..15472818 | 17..593 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:40:09 Download gff for
BO18569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15366276..15366851 | 17..593 | 99 | | Plus |
BO18569.complete Sequence
607 bp assembled on 2006-10-11
GenBank Submission: FJ634477
> BO18569.complete
GAAGTTATCAGTCGACATGACGACCAGCTCGCCTCACCCCACCTACGTAA
TACTGGGCTCTGGCGGCCACACGGCGGAGATGTGCCGGCTGACCCAGGCG
CTGCTGCAACAGACAGACATCGAACAGACGGAGAAGTACCAGCCAATTAG
ACTGATCCTGGCCAACAGTGACTCTACCTCCGAGCGCCAGTTCAGGCAGG
TCCTGCCGCAGGCTGCCCAGAGGGCGGAATTCGTGAAGGTGCCGCGCAGC
CGCGACGTGGGCCAATCCTGGCTAAGCAGCATCTTCACCAGCCTGTGGGC
GCTTCTCTGGAGCTGCTATCTGGTCTGGCGTGATCGCCCCCAACTGATCC
TCTGCAATGGACCCGGCACCTGTGTGCCCTTCTGCTATGCCGCCTATCTG
TGGCGCCTCCTCGGACGCCTGCCCTCGCACTCCAGAATAGTGTTCGTGGA
GAGCTTCTGCCGCGTGGAGACGCTGTCGCTGAGCGGACGCCTGCTCCTTC
CGCTGGCGGACCTCTTTGTGGTCCACTGGCCGGCGTTGGCCACGCGCTAT
TTGGATAAAAAGAATGTGCGATATTTTGGGCGAATCCTGGCAAGCTTTCT
AGACCAT
BO18569.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:42:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6308-RA | 576 | CG6308-PA | 1..573 | 17..589 | 2865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:42:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6308-RA | 696 | CG6308-RA | 80..652 | 17..589 | 2865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:42:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15472243..15472815 | 17..589 | 2865 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:42:32 has no hits.
BO18569.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:07:44 Download gff for
BO18569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6308-RA | 1..576 | 17..593 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:24:03 Download gff for
BO18569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6308-RA | 1..576 | 17..593 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:34:21 Download gff for
BO18569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6308-RA | 80..652 | 17..591 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:07:44 Download gff for
BO18569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6308-RA | 1..576 | 17..593 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:40:11 Download gff for
BO18569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6308-RA | 80..652 | 17..591 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:40:11 Download gff for
BO18569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15472243..15472815 | 17..591 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:34:21 Download gff for
BO18569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15366276..15366848 | 17..591 | 99 | | Plus |
BO18569.pep Sequence
Translation from 16 to 607
> BO18569.pep
MTTSSPHPTYVILGSGGHTAEMCRLTQALLQQTDIEQTEKYQPIRLILAN
SDSTSERQFRQVLPQAAQRAEFVKVPRSRDVGQSWLSSIFTSLWALLWSC
YLVWRDRPQLILCNGPGTCVPFCYAAYLWRLLGRLPSHSRIVFVESFCRV
ETLSLSGRLLLPLADLFVVHWPALATRYLDKKNVRYFGRILASFLDH
BO18569.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:10:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6308-PA | 191 | CG6308-PA | 1..191 | 1..191 | 1011 | 100 | Plus |
