Clone BO18595 Report

Search the DGRC for BO18595

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:185
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptCG18363-RA
Protein status:BO18595.pep: validated full length
Sequenced Size:940

Clone Sequence Records

BO18595.3prime Sequence

840 bp (695 high quality bases) assembled on 2006-10-13

> BO18595.3prime
ATGGTCTAGAAAGCTTGCATTGTACTTCTCCCCTCCCAGGGAGCAAATTC
CGAAATGGAGCCTCAGTTGCTCGTACAAAACAAATAGCAAAGTGGTGGCC
GGTGCTTTTCGCACTATAGTTGGCACAAATCCTCGATAGGGTCCCATTAC
GCCAAAGCGCATCATGTGAACAGACGCTTGGAAGACTGTGCGAAATTCGC
CGGGTCTGGAGTTCATCATAATGGTCCTTACCACGTCCAGGGGATGAGTG
ATCGCAGACGAAATGATCGATGTACCCAGCGAAGTGAGAAAGTGCAAGGG
CAATCCGTCATTCACAGAGATATTTTTCCTCACTTCCGTTTTAATAATAT
CGTAGAAAGCTATCTGGCTGCAAGTGCTTAGCGATGATTTGAAGACCGCT
ACCGATCCACCTTTGTAAAGTGCCTTCCAGCCCTCCTCCTTGGGAATTCG
AATGAGTCCATCGAAGACATGCTTATAGTTGCGTCGCTTGTACGGCGGCT
CCTTCATATCGGTTTGCATCCGCACGTTAATCAGATCCGTTGGTATACCA
AACGCAGAACCGCAAGCTCCAGCCACGCAGCCCAAAATAATCTTTCCCAG
ATATGAATCCCTATCGACGTACTCCATTTTCTTGCCAGTATCATACACTA
TGAAATGGATATTGGTGCTGGTCATTTGTCTCAGGATGGCAGCCGAGAAA
CCATCGTAGAAGCCCAAGTATCCTTTTAAAGAGTGTATTCTTTTGACCGT
GCCTAAAATTGAACGCTTTTGCCTTTGGATCTGCATGTGAGTTTTCACGA
TATCAATGGGCGCCACTGCGAAAGCAACGCACATCGAGGC

BO18595.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:23:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG18363-PA 909 CG18363-RA 85..906 840..19 4060 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:01:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dic4-RC 1811 CG18363-RC 226..1047 840..19 4080 99.8 Minus
Dic4-RA 1144 CG18363-RA 226..1047 840..19 4080 99.8 Minus
Dic4-RB 1140 CG18363-RB 226..1043 840..19 4010 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:01:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18697166..18697492 19..345 1635 100 Plus
3L 28110227 3L 18697760..18698009 475..724 1220 99.2 Plus
3L 28110227 3L 18697567..18697699 346..478 665 100 Plus
3L 28110227 3L 18698069..18698187 722..840 580 99.2 Plus
Blast to na_te.dros performed on 2015-02-12 04:01:44 has no hits.

BO18595.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:25:14 Download gff for BO18595.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18363-PA 85..909 15..840 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:33:46 Download gff for BO18595.3prime
Subject Subject Range Query Range Percent Splice Strand
Dic4-RA 226..1051 14..840 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:01:54 Download gff for BO18595.3prime
Subject Subject Range Query Range Percent Splice Strand
Dic4-RA 226..1051 14..840 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:01:54 Download gff for BO18595.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 18697162..18697492 14..345 99 <- Plus
3L 18697567..18697699 346..478 100 <- Plus
3L 18697764..18698007 479..722 99 <- Plus
3L 18698070..18698187 723..840 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:33:46 Download gff for BO18595.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18690262..18690592 14..345 99 <- Plus
arm_3L 18690667..18690799 346..478 100 <- Plus
arm_3L 18690864..18691107 479..722 99 <- Plus
arm_3L 18691170..18691287 723..840 99   Plus

BO18595.5prime Sequence

844 bp (770 high quality bases) assembled on 2006-10-13

> BO18595.5prime
GAAGTTATCAGTCGACATGCCGGTTTTTGATGACCACTTCCTTGGCGACT
GCCATGATGAGCCCGAAGGACTTTTGCCGCGTTGGTGGTTCGGTGGCTTT
GCCTCGATGTGCGTTGCCTTCGCAGTGGCGCCCATTGATATCGTGAAAAC
TCACATGCAGATCCAAAGGCAAAAGCGTTCAATTTTAGGCACGGTCAAAA
GAATACACTCTTTAAAAGGATACTTGGGCTTCTACGATGGCTTCTCGGCT
GCCATCCTGAGACAAATGACCAGCACCAATATCCATTTCATAGTGTATGA
TACTGGCAAGAAAATGGAGTACGTCGATAGGGATTCATATCTGGGAAAGA
TTATTTTGGGCTGCGTGGCTGGAGCTTGCGGTTCTGCGTTTGGTATACCA
ACGGATCTGATTAACGTGCGGATGCAAACCGATATGAAGGAGCCGCCGTA
CAAGCGACGCAACTATAAGCATGTCTTCGATGGACTCATTCGAATTCCCA
AGGAGGAGGGCTGGAAGGCACTTTACAAAGGTGGATCGGTAGCGGTCTTC
AAATCATCGCTAAGCACTTGCAGCCAGATAGCTTTCTACGATATTATTAA
AACGGAAGTGAGGAAAAATATCTCTGTGAATGACGGATTGCCCTTGCACT
TTCTCACTTCGCTGGGTACATCGATCATTTCGTCTGCGATCACTCATCCC
CTGGACGTGGTAAGGACCATTATGATGAACTCCAGACCCGGCGAATTTCG
CACAGTCTTCCAAGCGTCTGTTCACATGATGCGCTTTGGCGTAATGGGAC
CCTATCGAGGATTTGTGCCAACTATAGTGCGAAAAGCACCGGCC

BO18595.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:23:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG18363-PA 909 CG18363-RA 1..828 17..844 4140 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:03:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dic4-RC 1811 CG18363-RC 142..969 17..844 4140 100 Plus
Dic4-RA 1144 CG18363-RA 142..969 17..844 4140 100 Plus
Dic4-RB 1140 CG18363-RB 142..965 17..844 4070 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:03:32
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18697244..18697492 844..596 1245 100 Minus
3L 28110227 3L 18697760..18698009 466..217 1235 99.6 Minus
3L 28110227 3L 18698069..18698271 219..17 1015 100 Minus
3L 28110227 3L 18697567..18697699 595..463 665 100 Minus
Blast to na_te.dros performed on 2015-02-10 18:03:35 has no hits.

BO18595.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:25:15 Download gff for BO18595.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18363-PA 1..828 17..844 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:44:25 Download gff for BO18595.5prime
Subject Subject Range Query Range Percent Splice Strand
Dic4-RA 138..969 10..844 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:13:47 Download gff for BO18595.5prime
Subject Subject Range Query Range Percent Splice Strand
Dic4-RA 138..969 10..844 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:13:47 Download gff for BO18595.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 18697244..18697492 596..844 100 <- Minus
3L 18697567..18697699 463..595 100 <- Minus
3L 18697764..18698007 219..462 100 <- Minus
3L 18698070..18698275 10..218 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:44:25 Download gff for BO18595.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18691170..18691375 10..218 98   Minus
arm_3L 18690344..18690592 596..844 100 <- Minus
arm_3L 18690667..18690799 463..595 100 <- Minus
arm_3L 18690864..18691107 219..462 100 <- Minus

BO18595.complete Sequence

940 bp assembled on 2006-10-11

GenBank Submission: FJ634487

> BO18595.complete
GAAGTTATCAGTCGACATGCCGGTTTTTGATGACCACTTCCTTGGCGACT
GCCATGATGAGCCCGAAGGACTTTTGCCGCGTTGGTGGTTCGGTGGCTTT
GCCTCGATGTGCGTTGCCTTCGCAGTGGCGCCCATTGATATCGTGAAAAC
TCACATGCAGATCCAAAGGCAAAAGCGTTCAATTTTAGGCACGGTCAAAA
GAATACACTCTTTAAAAGGATACTTGGGCTTCTACGATGGCTTCTCGGCT
GCCATCCTGAGACAAATGACCAGCACCAATATCCATTTCATAGTGTATGA
TACTGGCAAGAAAATGGAGTACGTCGATAGGGATTCATATCTGGGAAAGA
TTATTTTGGGCTGCGTGGCTGGAGCTTGCGGTTCTGCGTTTGGTATACCA
ACGGATCTGATTAACGTGCGGATGCAAACCGATATGAAGGAGCCGCCGTA
CAAGCGACGCAACTATAAGCATGTCTTCGATGGACTCATTCGAATTCCCA
AGGAGGAGGGCTGGAAGGCACTTTACAAAGGTGGATCGGTAGCGGTCTTC
AAATCATCGCTAAGCACTTGCAGCCAGATAGCTTTCTACGATATTATTAA
AACGGAAGTGAGGAAAAATATCTCTGTGAATGACGGATTGCCCTTGCACT
TTCTCACTTCGCTGGGTACATCGATCATTTCGTCTGCGATCACTCATCCC
CTGGACGTGGTAAGGACCATTATGATGAACTCCAGACCCGGCGAATTTCG
CACAGTCTTCCAAGCGTCTGTTCACATGATGCGCTTTGGCGTAATGGGAC
CCTATCGAGGATTTGTGCCAACTATAGTGCGAAAAGCACCGGCCACCACT
TTGCTATTTGTTTTGTACGAGCAACTGAGGCTCCATTTCGGAATTTGCTC
CCTGGGAGGGGAGAAGTACAATGCAAGCTTTCTAGACCAT

BO18595.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:54:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dic4-RC 909 CG18363-PC 1..906 17..922 4530 100 Plus
Dic4-RA 909 CG18363-PA 1..906 17..922 4530 100 Plus
Dic4-RB 522 CG18363-PB 1..522 17..542 2535 99.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:54:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dic4-RC 1811 CG18363-RC 142..1047 17..922 4530 100 Plus
Dic4-RA 1144 CG18363-RA 142..1047 17..922 4530 100 Plus
Dic4-RB 1140 CG18363-RB 142..1043 17..922 4435 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:54:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18697166..18697492 922..596 1635 100 Minus
3L 28110227 3L 18697760..18698009 466..217 1235 99.6 Minus
3L 28110227 3L 18698069..18698271 219..17 1015 100 Minus
3L 28110227 3L 18697567..18697699 595..463 665 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:54:08 has no hits.

BO18595.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:19:44 Download gff for BO18595.complete
Subject Subject Range Query Range Percent Splice Strand
CG18363-RA 1..909 17..926 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:38:14 Download gff for BO18595.complete
Subject Subject Range Query Range Percent Splice Strand
CG18363-RA 138..1051 10..927 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:35:07 Download gff for BO18595.complete
Subject Subject Range Query Range Percent Splice Strand
Dic4-RA 142..1047 17..924 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:19:44 Download gff for BO18595.complete
Subject Subject Range Query Range Percent Splice Strand
CG18363-RA 138..1051 10..927 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:29:19 Download gff for BO18595.complete
Subject Subject Range Query Range Percent Splice Strand
Dic4-RA 142..1047 17..924 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:29:19 Download gff for BO18595.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18697764..18698007 219..462 100 <- Minus
3L 18698070..18698271 17..218 100   Minus
3L 18697164..18697492 596..924 99 <- Minus
3L 18697567..18697699 463..595 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:35:07 Download gff for BO18595.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18690667..18690799 463..595 100 <- Minus
arm_3L 18690264..18690592 596..924 99 <- Minus
arm_3L 18690864..18691107 219..462 100 <- Minus
arm_3L 18691170..18691371 17..218 100   Minus

BO18595.pep Sequence

Translation from 16 to 940

> BO18595.pep
MPVFDDHFLGDCHDEPEGLLPRWWFGGFASMCVAFAVAPIDIVKTHMQIQ
RQKRSILGTVKRIHSLKGYLGFYDGFSAAILRQMTSTNIHFIVYDTGKKM
EYVDRDSYLGKIILGCVAGACGSAFGIPTDLINVRMQTDMKEPPYKRRNY
KHVFDGLIRIPKEEGWKALYKGGSVAVFKSSLSTCSQIAFYDIIKTEVRK
NISVNDGLPLHFLTSLGTSIISSAITHPLDVVRTIMMNSRPGEFRTVFQA
SVHMMRFGVMGPYRGFVPTIVRKAPATTLLFVLYEQLRLHFGICSLGGEK
YNASFLDH

BO18595.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:36:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dic4-PC 302 CG18363-PC 1..302 1..302 1596 100 Plus
Dic4-PA 302 CG18363-PA 1..302 1..302 1596 100 Plus
Dic4-PB 173 CG18363-PB 1..147 1..147 793 100 Plus
Dic3-PA 287 CG11196-PA 9..281 20..292 588 42.9 Plus
Dic1-PC 280 CG8790-PC 10..277 23..292 576 41.9 Plus