Clone Sequence Records
BO18596.3prime Sequence
401 bp (401 high quality bases) assembled on 2006-10-13
> BO18596.3prime
ATGGTCTAGAAAGCTTGCGGGGTTTGGTGGCAGTCCCCGCAATGGTGGAT
GATAGTCACCAGCGTAATTACCATAGCCACCGCCATCACAATCGCCCTCG
CCAATCAAACCGCTTGGCATCGGAGGCTCCCTCCAGTTCCACACGCCGAT
ACTATCGCCGCCTCCCATATTTAATTCCGTCCTCCGTCGATGTAGCATTA
CACGCATATTGATCATGAAACGATTCACATCCCGCTGATGATCGATGCGC
AATTGAATCGGTGGAATTTGGGTGATTCGACGTTCATCAGTCGATGGCTG
TATATTGCGCTCTTCTTCGCCCGGCACGCGATCCATATTCAAGCGAATGC
GAAAACTCTGACCTGGATTTGGCCTAAATGGATTCATGTCGACTGATAAC
T
BO18596.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:23:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15576-PB | 372 | CG15576-RB | 1..369 | 387..19 | 1845 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:42:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15576-RB | 921 | CG15576-RB | 153..521 | 387..19 | 1845 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:41:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4252270..4252638 | 19..387 | 1845 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:42:02 has no hits.
BO18596.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:25:16 Download gff for
BO18596.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15576-PB | 1..372 | 18..387 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:24:28 Download gff for
BO18596.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15576-RB | 144..521 | 19..397 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:18:32 Download gff for
BO18596.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15576-RB | 144..521 | 19..397 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:18:32 Download gff for
BO18596.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4252270..4252647 | 19..397 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:24:28 Download gff for
BO18596.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4146303..4146680 | 19..397 | 98 | | Plus |
BO18596.5prime Sequence
401 bp (401 high quality bases) assembled on 2006-10-13
> BO18596.5prime
GAAGTTATCAGTCGACATGAATCCATTTAGGCCAAATCCAGGTCAGAGTT
TTCGCATTCGCTTGAATATGGATCGCGTGCCGGGCGAAGAAGAGCGCAAT
ATACAGCCATCGACTGATGAACGTCGAATCACCCAAATTCCACCGATTCA
ATTGCGCATCGATCATCAGCGGGATGTGAATCGTTTCATGATCAATATGC
GTGTAATGCTACATCGACGGAGGACGGAATTAAATATGGGAGGCGGCGAT
AGTATCGGCGTGTGGAACTGGAGGGAGCCTCCGATGCCAAGCGGTTTGAT
TGGCGAGGGCGATTGTGATGGCGGTGGCTATGGTAATTACGCTGGTGACT
ATCATCCACCATTGCGGGGACTGCCACCAAACCCCGCAAGCTTTCTAGAC
C
BO18596.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:23:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15576-PB | 372 | CG15576-RB | 1..369 | 17..385 | 1845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:11:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15576-RB | 921 | CG15576-RB | 153..521 | 17..385 | 1845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:10:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4252270..4252638 | 385..17 | 1845 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-08 12:10:58 has no hits.
BO18596.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:25:16 Download gff for
BO18596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15576-PB | 1..372 | 17..386 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:40:31 Download gff for
BO18596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15576-RB | 144..521 | 7..385 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:45:11 Download gff for
BO18596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15576-RB | 144..521 | 7..385 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:45:11 Download gff for
BO18596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4252270..4252647 | 7..385 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:40:31 Download gff for
BO18596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4146303..4146680 | 7..385 | 98 | | Minus |
BO18596.complete Sequence
403 bp assembled on 2006-10-11
GenBank Submission: FJ634488
> BO18596.complete
GAAGTTATCAGTCGACATGAATCCATTTAGGCCAAATCCAGGTCAGAGTT
TTCGCATTCGCTTGAATATGGATCGCGTGCCGGGCGAAGAAGAGCGCAAT
ATACAGCCATCGACTGATGAACGTCGAATCACCCAAATTCCACCGATTCA
ATTGCGCATCGATCATCAGCGGGATGTGAATCGTTTCATGATCAATATGC
GTGTAATGCTACATCGACGGAGGACGGAATTAAATATGGGAGGCGGCGAT
AGTATCGGCGTGTGGAACTGGAGGGAGCCTCCGATGCCAAGCGGTTTGAT
TGGCGAGGGCGATTGTGATGGCGGTGGCTATGGTAATTACGCTGGTGACT
ATCATCCACCATTGCGGGGACTGCCACCAAACCCCGCAAGCTTTCTAGAC
CAT
BO18596.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:29:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15576-RB | 372 | CG15576-PB | 1..369 | 17..385 | 1845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:29:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15576-RB | 921 | CG15576-RB | 153..521 | 17..385 | 1845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:29:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4252270..4252638 | 385..17 | 1845 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:29:18 has no hits.
BO18596.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:19:45 Download gff for
BO18596.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15576-RB | 1..372 | 17..386 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:38:16 Download gff for
BO18596.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15576-RB | 51..428 | 7..385 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:55:08 Download gff for
BO18596.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15576-RB | 153..521 | 17..387 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:19:45 Download gff for
BO18596.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15576-RB | 51..428 | 7..385 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:26:31 Download gff for
BO18596.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15576-RB | 153..521 | 17..387 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:26:31 Download gff for
BO18596.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4252268..4252638 | 17..387 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:55:08 Download gff for
BO18596.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4146301..4146671 | 17..387 | 99 | | Minus |
BO18596.pep Sequence
Translation from 16 to 403
> BO18596.pep
MNPFRPNPGQSFRIRLNMDRVPGEEERNIQPSTDERRITQIPPIQLRIDH
QRDVNRFMINMRVMLHRRRTELNMGGGDSIGVWNWREPPMPSGLIGEGDC
DGGGYGNYAGDYHPPLRGLPPNPASFLDH
BO18596.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:36:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15576-PB | 123 | CG15576-PB | 1..123 | 1..123 | 687 | 100 | Plus |
