BO18608.complete Sequence
406 bp assembled on 2009-05-13
GenBank Submission: KX799205
> BO18608.complete
GAAGTTATCAGTCGACATGCTTTTCGATGGCGCAGCCGGCAATAGGCAGG
GTCAGGGCCAGAATGCCCTGAAGCCATTGGTACAAGGCCAGGAGGAGCCC
GCCCTATGCGAGCAGTACTATCTGCTTGGCGATGGTTCCATCGTTCTGCG
CAACCTTCGCACCGACTTGTCCAATCCGCGCCTGGAGAGAGTGAAATCGC
GCTGCTGCCAGCGCCAAACGCTCATCCACGACATATGCGTCAACTGCGTG
ATGGATCTCTGCGAGGAGTGTGGCTACTCCTGCGGCGAGTGCTCCAGGTT
CATTTGCCGCAGCTGCGTGACTTTATTTGGTAATCGAGTTGAAGAAGAGA
AGGATCCCCTGTGCGAGCACTGCCAGATGTTCTTCAGCGCAAGCTTTCTA
GACCAT
BO18608.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:00:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13373-RB | 534 | CG13373-PB | 160..531 | 17..388 | 1860 | 100 | Plus |
| CG13373-RA | 375 | CG13373-PA | 1..372 | 17..388 | 1860 | 100 | Plus |
| CG3176-RD | 366 | CG3176-PD | 1..363 | 17..388 | 1270 | 90.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:00:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13373-RB | 812 | CG13373-RB | 323..694 | 17..388 | 1860 | 100 | Plus |
| CG13373-RA | 743 | CG13373-RA | 254..625 | 17..388 | 1860 | 100 | Plus |
| CG3176-RD | 627 | CG3176-RD | 75..437 | 17..388 | 1270 | 90.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:00:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 477621..477931 | 17..327 | 1555 | 100 | Plus |
| X | 23542271 | X | 479644..479945 | 17..327 | 1040 | 89.7 | Plus |
| X | 23542271 | X | 482132..482433 | 17..327 | 1025 | 89.4 | Plus |
| X | 23542271 | X | 478013..478073 | 328..388 | 305 | 100 | Plus |
| X | 23542271 | X | 482518..482578 | 328..388 | 245 | 93.4 | Plus |
| X | 23542271 | X | 480030..480090 | 328..388 | 230 | 91.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:00:46 has no hits.
BO18608.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:19 Download gff for
BO18608.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13373-RB | 160..531 | 17..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:43:36 Download gff for
BO18608.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13373-RA | 254..625 | 17..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:12:46 Download gff for
BO18608.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13373-RA | 254..625 | 17..390 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:12:46 Download gff for
BO18608.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 477621..477931 | 17..327 | 100 | -> | Plus |
| X | 478013..478073 | 328..390 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:43:36 Download gff for
BO18608.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 371654..371964 | 17..327 | 100 | -> | Plus |
| arm_X | 372046..372106 | 328..390 | 96 | | Plus |
BO18608.pep Sequence
Translation from 16 to 406
> BO18608.pep
MLFDGAAGNRQGQGQNALKPLVQGQEEPALCEQYYLLGDGSIVLRNLRTD
LSNPRLERVKSRCCQRQTLIHDICVNCVMDLCEECGYSCGECSRFICRSC
VTLFGNRVEEEKDPLCEHCQMFFSASFLDH
BO18608.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:01:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13373-PA | 124 | CG13373-PA | 1..124 | 1..124 | 683 | 100 | Plus |
| CG13373-PB | 177 | CG13373-PB | 54..177 | 1..124 | 683 | 100 | Plus |
| CG3176-PD | 121 | CG3176-PD | 1..121 | 1..124 | 557 | 81.5 | Plus |
| CG3176-PA | 121 | CG3176-PA | 1..121 | 1..124 | 557 | 81.5 | Plus |
| CG32817-PB | 121 | CG32817-PB | 1..121 | 1..124 | 549 | 80.6 | Plus |
