BO18610.complete Sequence
592 bp assembled on 2009-05-13
GenBank Submission: KX795344
> BO18610.complete
GAAGTTATCAGTCGACATGAAATTCCTTATTGCCTTCGCCCTGTTCGCCT
GCGTGGCCGCCGATGTTAGCCACCTGAGCAACGAGTACCTGCCCCCCGTC
CAGAGCTCGTACGCCGCTCCCTCGGTGAGCTACTCCGCACCAGCCGTGCA
GCAGACCTACGCCGCTCCAGCCATCCAGCAGTCGTATGTCGCCCCCAGCA
ACGAGTACCTGCCTCCTGTGCAGACCTACTCCGCACCGGCCGTCCAGAGG
ACCTACTCCGCACCAGCTGTCCAGAGGACCTACTCCGCCCCCTCTGTTAG
CTACTCGGCACCCTCTGTGAGCTACTCGGCTCCATCGGTCAGCTACTCCG
CTCCTGCTGTCCAGCAGTCGTACTCCGCTCCATCGGTCAGCTACTCCGCC
CCTGCTGTCCAGCAGTCGTACTCCGCTCCATCGGTCAGCTACTCCGCCCC
TGCTGTCCAGCAGTCGTACTCCGCTCCTGCCGTCAGCTACTCCGCCCCAT
CGGTGAGCTACTCTGCACCCTCCGTGGATGTGGGCACCCAGTACGCCTCC
AACGGTGGCTACGTCTACAGGAAGGCAAGCTTTCTAGACCAT
BO18610.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:58:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1368-RA | 561 | CG1368-PA | 1..558 | 17..574 | 2790 | 100 | Plus |
| CG1368-RA | 561 | CG1368-PA | 307..434 | 371..498 | 565 | 96.1 | Plus |
| CG1368-RA | 561 | CG1368-PA | 355..482 | 323..450 | 565 | 96.1 | Plus |
| CG1368-RA | 561 | CG1368-PA | 307..386 | 419..498 | 325 | 93.8 | Plus |
| CG1368-RA | 561 | CG1368-PA | 403..482 | 323..402 | 325 | 93.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:58:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1368-RA | 774 | CG1368-RA | 72..629 | 17..574 | 2790 | 100 | Plus |
| CG1368-RA | 774 | CG1368-RA | 378..505 | 371..498 | 565 | 96.1 | Plus |
| CG1368-RA | 774 | CG1368-RA | 426..553 | 323..450 | 565 | 96.1 | Plus |
| CG1368-RA | 774 | CG1368-RA | 378..457 | 419..498 | 325 | 93.8 | Plus |
| CG1368-RA | 774 | CG1368-RA | 474..553 | 323..402 | 325 | 93.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:58:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14174970..14175525 | 19..574 | 2780 | 100 | Plus |
| X | 23542271 | X | 14175274..14175401 | 371..498 | 565 | 96.1 | Plus |
| X | 23542271 | X | 14175322..14175449 | 323..450 | 565 | 96.1 | Plus |
| X | 23542271 | X | 14175274..14175353 | 419..498 | 325 | 93.8 | Plus |
| X | 23542271 | X | 14175370..14175449 | 323..402 | 325 | 93.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:58:27 has no hits.
BO18610.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:36:57 Download gff for
BO18610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1368-RA | 67..624 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:43:31 Download gff for
BO18610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1368-RA | 72..629 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:35:35 Download gff for
BO18610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1368-RA | 72..629 | 17..576 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:35:35 Download gff for
BO18610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14174969..14175525 | 17..576 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:43:31 Download gff for
BO18610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14069002..14069558 | 17..576 | 99 | | Plus |
BO18610.pep Sequence
Translation from 16 to 592
> BO18610.pep
MKFLIAFALFACVAADVSHLSNEYLPPVQSSYAAPSVSYSAPAVQQTYAA
PAIQQSYVAPSNEYLPPVQTYSAPAVQRTYSAPAVQRTYSAPSVSYSAPS
VSYSAPSVSYSAPAVQQSYSAPSVSYSAPAVQQSYSAPSVSYSAPAVQQS
YSAPAVSYSAPSVSYSAPSVDVGTQYASNGGYVYRKASFLDH
BO18610.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:53:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1368-PA | 186 | CG1368-PA | 1..186 | 1..186 | 932 | 100 | Plus |
| CG32603-PA | 345 | CG32603-PA | 156..345 | 14..184 | 389 | 51.8 | Plus |
| CG32603-PA | 345 | CG32603-PA | 1..244 | 1..174 | 343 | 44.3 | Plus |
| CG11350-PC | 456 | CG11350-PC | 1..161 | 1..178 | 343 | 50.8 | Plus |
| CG11350-PC | 456 | CG11350-PC | 235..444 | 21..185 | 317 | 42.6 | Plus |
| CG34205-PA | 217 | CG34205-PA | 23..212 | 1..173 | 311 | 39.9 | Plus |
| CG11350-PC | 456 | CG11350-PC | 108..302 | 31..185 | 282 | 42.2 | Plus |
| CG11585-PB | 342 | CG11585-PB | 100..298 | 14..181 | 280 | 46.1 | Plus |
