BO18614.complete Sequence
712 bp assembled on 2009-05-13
> BO18614.complete
GAAGTTATCAGTCGACATGAAGTTACTTGAAAGTTCACGTTTTGAGGCTA
TCAACAACGCTCTTTCTATACAAACAAGTGGCATCACGATTTTTGGACGG
ATAGAAAGTTACTCATGCAAAATGGTTGCGGCCGAGAAAGTATTGTATAA
ACGATTTACAGCAGATTCTCATGGGCATGACCTTCAGGCGTTATCACCTC
CACAAACTTTGGCTGACTTTTCACCAAACTTTCGTCGAAACAACAGTCAA
TCTGGAGATGAAGGCATTACTCTTTGCGATACCATTTCCAGAAAAACATT
ATTTTATTTAATTGCTACTTTAAATGCGTCTTTTGAACCAGACTACGATT
TTTCTGAAGCAAAGTCCCATGAATTTAGCAAAGAGCCGTCATTGCAGTGG
GTTATGAACTCAATCCATGCAAATTTATCGGCATTAGCGGGAGATCAGTA
TCAAGCTATACGTCAACCATTATGGTCTGCAGTTGACGACGAAGTGATCC
TATCAGAGTGTGACATATACAGTTATAATCCAGATCTAAGTTGCGATCCT
TTTGGCGAACCAGGCTGCTTGTGGTCATTTAATTATTTCTTTTATAATAA
GAAATTAAAACGAATTGTTTTTTTTACAAGTCGAGCAGTGAATTCTCTTT
ACGCCGGTGAAACCTTACCCTTTTCGATGGAAGAAGAAGTGTACGCAAGC
TTTCTAGACCAT
BO18614.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:54:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Maf1-RE | 681 | CG40196-PE | 1..678 | 17..694 | 3375 | 99.9 | Plus |
| Maf1-RD | 681 | CG40196-PD | 1..678 | 17..694 | 3375 | 99.9 | Plus |
| Maf1-RB | 681 | CG40196-PB | 1..678 | 17..694 | 3375 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Maf1-RE | 1078 | CG40196-RE | 210..888 | 16..694 | 3380 | 99.9 | Plus |
| Maf1-RD | 1102 | CG40196-RD | 307..985 | 16..694 | 3380 | 99.9 | Plus |
| Maf1-RB | 1358 | CG40196-RB | 490..1168 | 16..694 | 3380 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 1515890..1516171 | 642..361 | 1395 | 99.6 | Minus |
| 2R | 25286936 | 2R | 1516222..1516469 | 364..117 | 1240 | 100 | Minus |
| 2R | 25286936 | 2R | 1516520..1516621 | 117..16 | 510 | 100 | Minus |
| 2R | 25286936 | 2R | 1515785..1515836 | 694..643 | 260 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 15:54:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 6413..6471 | 628..570 | 123 | 71.7 | Minus |
BO18614.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:23 Download gff for
BO18614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40196-RB | 253..930 | 17..696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:47:25 Download gff for
BO18614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Maf1-RC | 473..1150 | 17..696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:22 Download gff for
BO18614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Maf1-RB | 491..1168 | 17..696 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:22 Download gff for
BO18614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 1515782..1515836 | 643..696 | 96 | <- | Minus |
| 2R | 1515890..1516167 | 365..642 | 99 | <- | Minus |
| 2R | 1516222..1516468 | 118..364 | 100 | <- | Minus |
| 2R | 1516520..1516620 | 17..117 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:47:25 Download gff for
BO18614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ArmU | 1092106..1092160 | 643..696 | 96 | <- | Minus |
| ArmU | 1092214..1092491 | 365..642 | 99 | <- | Minus |
| ArmU | 1092546..1092792 | 118..364 | 100 | <- | Minus |
| ArmU | 1092844..1092944 | 17..117 | 100 | | Minus |
BO18614.pep Sequence
Translation from 16 to 712
> BO18614.pep
MKLLESSRFEAINNALSIQTSGITIFGRIESYSCKMVAAEKVLYKRFTAD
SHGHDLQALSPPQTLADFSPNFRRNNSQSGDEGITLCDTISRKTLFYLIA
TLNASFEPDYDFSEAKSHEFSKEPSLQWVMNSIHANLSALAGDQYQAIRQ
PLWSAVDDEVILSECDIYSYNPDLSCDPFGEPGCLWSFNYFFYNKKLKRI
VFFTSRAVNSLYAGETLPFSMEEEVYASFLDH
BO18614.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:01:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Maf1-PE | 226 | CG40196-PE | 1..226 | 1..226 | 1182 | 99.6 | Plus |
| Maf1-PD | 226 | CG40196-PD | 1..226 | 1..226 | 1182 | 99.6 | Plus |
| Maf1-PB | 226 | CG40196-PB | 1..226 | 1..226 | 1182 | 99.6 | Plus |
| Maf1-PC | 226 | CG40196-PC | 1..226 | 1..226 | 1182 | 99.6 | Plus |
| Maf1-PA | 226 | CG40196-PA | 1..226 | 1..226 | 1182 | 99.6 | Plus |
