BO18619.complete Sequence
787 bp assembled on 2009-05-13
GenBank Submission: KX794062
> BO18619.complete
GAAGTTATCAGTCGACATGGCCACCTCAGTCCTGCTAGCCTGTGGACTCA
ATGAGCAGAAATTGCCAGGATTTGTCCACATCAGCGAGGAGTCCAATGTG
GATGCCAGCTTTTTGATCAGCTGCGTTTTGGGTCAGAGATTGCGCATCTC
AAATGCTGGAACTCTGCTCGTCTGTTTGCAGCATCACTACCAGCATTATT
TTAATGCTGGCATGAGGTTGGGCTATAATACGAACATTTTCCAGGGGAAA
ACTCTGGGTGTTATCGATGTTCTGAGCGACATGGCCGGCGAGGGATTGGC
TTCCAAATGGCTAACGAATACCGAGGGTCAGACATTAACCGACCAGCTAG
TAGAGGATATTCGCGCCCAGGTGGAGAGGAACTATGCCAGTCGCAACTCA
TATACGGTTCTGATCGACAATCTGTCCATATTGTTCAATTTGGGAGCAAG
CAAGCTGCAGGTTCAGCAGTTCTGCCAGGACCTGGCTGCGCTAGGCAAGG
AGCGCGAAAAGCTGACGGTGATCACCAAGCTCAGCAACAGCGACATCTAC
CAGCTGACGGACAACAATGTCGCCAAGCTCGGTCAGGTGCGCATCCAGGT
GTTGCGTTTAAAGAGCGGTGTCTTCCGTGAGGTGGATGGCAAGCTGCTAA
TCGAACGCGTTCTGGACGAAGGAAACTATGCCTGCGAGGAGACACGCAAG
GAGGTGCTCTACAAGGTCAACGATCGCAACGTCAAGGTCTTTGCACCCGG
CGAAATTGGGGTCAAAGTCGCAAGCTTTCTAGACCAT
BO18619.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:08:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| poly-RB | 756 | CG9829-PB | 1..753 | 17..769 | 3765 | 100 | Plus |
| poly-RA | 756 | CG9829-PA | 1..753 | 17..769 | 3765 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:08:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| poly-RB | 1314 | CG9829-RB | 282..1034 | 17..769 | 3765 | 100 | Plus |
| poly-RA | 1157 | CG9829-RA | 161..913 | 17..769 | 3765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:08:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13362096..13362848 | 769..17 | 3765 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:08:01 has no hits.
BO18619.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:14 Download gff for
BO18619.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| poly-RA | 154..906 | 17..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:03:38 Download gff for
BO18619.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| poly-RA | 161..913 | 17..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:15:31 Download gff for
BO18619.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| poly-RA | 161..913 | 17..771 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:15:31 Download gff for
BO18619.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13362094..13362848 | 17..771 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:03:38 Download gff for
BO18619.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9187816..9188570 | 17..771 | 99 | | Minus |
BO18619.pep Sequence
Translation from 16 to 787
> BO18619.pep
MATSVLLACGLNEQKLPGFVHISEESNVDASFLISCVLGQRLRISNAGTL
LVCLQHHYQHYFNAGMRLGYNTNIFQGKTLGVIDVLSDMAGEGLASKWLT
NTEGQTLTDQLVEDIRAQVERNYASRNSYTVLIDNLSILFNLGASKLQVQ
QFCQDLAALGKEREKLTVITKLSNSDIYQLTDNNVAKLGQVRIQVLRLKS
GVFREVDGKLLIERVLDEGNYACEETRKEVLYKVNDRNVKVFAPGEIGVK
VASFLDH
BO18619.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:00:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| poly-PB | 251 | CG9829-PB | 1..251 | 1..251 | 1268 | 100 | Plus |
| poly-PA | 251 | CG9829-PA | 1..251 | 1..251 | 1268 | 100 | Plus |
